FFCP PHASE1:Hg19::chr3:48470775..48470782,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=5364|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=9103|TSSclassifier=S|UniProt=O43157|association_with_transcript=89bp_to_ENST00000358459,ENST00000358536,NM_002673,uc003csw.2_5end|description=CAGE_peak_14_at_PLXNB1_5end|id=chr3:48470775..48470782,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000228;8.01e-18;1!CL:0002372;8.01e-18;1!CL:0000307;8.38e-07;3|ontology_enrichment_celltype_v019_2=CL:0000228,7.37e-18,1;CL:0002372,7.37e-18,1|ontology_enrichment_development_v019=CL:0000377;8.38e-07;3!UBERON:0006241;8.38e-07;3!UBERON:0003057;8.38e-07;3|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:3307;1.38e-09;2|ontology_enrichment_disease_v019_2=DOID:3307,1.12e-09,2|ontology_enrichment_uberon=UBERON:0000955!1.16e-21!69;UBERON:0006238!1.16e-21!69;UBERON:0000073!2.66e-21!94;UBERON:0001016!2.66e-21!94;UBERON:0005743!1.04e-20!86;UBERON:0000153!6.50e-20!129;UBERON:0007811!6.50e-20!129;UBERON:0000033!6.63e-20!123;UBERON:0001049!6.75e-20!57;UBERON:0005068!6.75e-20!57;UBERON:0006241!6.75e-20!57;UBERON:0007135!6.75e-20!57;UBERON:0002616!1.32e-19!59;UBERON:0004121!1.43e-19!169;UBERON:0001017!1.90e-19!82;UBERON:0000924!4.08e-19!173;UBERON:0006601!4.08e-19!173;UBERON:0002780!3.37e-17!41;UBERON:0001890!3.37e-17!41;UBERON:0006240!3.37e-17!41;UBERON:0002020!5.78e-17!34;UBERON:0003528!5.78e-17!34;UBERON:0001893!1.34e-16!34;UBERON:0003080!1.64e-16!42;UBERON:0002791!4.28e-16!33;UBERON:0003075!7.27e-16!86;UBERON:0007284!7.27e-16!86;UBERON:0002346!3.86e-15!90;UBERON:0001869!9.92e-15!32;UBERON:0003056!6.52e-12!61;UBERON:0004111!1.65e-11!241;UBERON:0000956!3.25e-11!25;UBERON:0000203!3.25e-11!25;UBERON:0007023!7.11e-11!115;UBERON:0000064!1.07e-10!219;UBERON:0000477!7.10e-10!286;UBERON:0000475!1.26e-09!365;UBERON:0001950!1.73e-09!20;UBERON:0002619!3.78e-09!22;UBERON:0000025!4.20e-09!194;UBERON:0002308!1.65e-07!9;UBERON:0000125!1.65e-07!9;UBERON:0000468!2.74e-07!659;UBERON:0002298!5.67e-07!8;UBERON:0000483!6.61e-07!309|ontology_enrichment_uberon_v019=UBERON:0002336;2.90e-18;1!UBERON:0011215;2.90e-18;1!UBERON:0001018;2.90e-18;1!UBERON:0002473;2.90e-18;1!UBERON:0005340;2.90e-18;1!UBERON:0003544;2.90e-18;1!UBERON:0005970;2.90e-18;1!UBERON:0002316;2.90e-18;1!UBERON:0001020;2.90e-18;1!UBERON:0002437;2.90e-18;1!UBERON:0002038;8.01e-18;1!UBERON:0009661;8.01e-18;1!UBERON:0002950;8.01e-18;1!UBERON:0001891;8.01e-18;1!UBERON:0000125;4.05e-17;9!UBERON:0002308;4.05e-17;9!UBERON:0002298;4.07e-12;6!UBERON:0009663;2.13e-10;7!UBERON:0005162;8.32e-10;2!UBERON:0000122;8.32e-10;2!UBERON:0002148;1.38e-09;2!UBERON:0001875;1.38e-09;2!UBERON:0006331;1.38e-09;2!UBERON:0009662;1.38e-09;2!UBERON:0006514;1.38e-09;2!UBERON:0002420;2.75e-08;9!UBERON:0007245;2.75e-08;9!UBERON:0010009;2.75e-08;9!UBERON:0010011;2.75e-08;9!UBERON:0000454;2.75e-08;9!UBERON:0001017;2.93e-07;75!UBERON:0001896;5.97e-07;3!UBERON:0005290;5.97e-07;3!UBERON:0000988;8.38e-07;3!UBERON:0002240;8.38e-07;3!UBERON:0005174;8.38e-07;3!UBERON:0001137;8.38e-07;3|ontology_enrichment_uberon_v019_2=UBERON:0002336,3.16e-18,1;UBERON:0011215,3.16e-18,1;UBERON:0001018,3.16e-18,1;UBERON:0002473,3.16e-18,1;UBERON:0005340,3.16e-18,1;UBERON:0003544,3.16e-18,1;UBERON:0005970,3.16e-18,1;UBERON:0002316,3.16e-18,1;UBERON:0001020,3.16e-18,1;UBERON:0002437,3.16e-18,1;UBERON:0002038,6.23e-18,1;UBERON:0009661,6.23e-18,1;UBERON:0002950,6.23e-18,1;UBERON:0001891,6.23e-18,1;UBERON:0009616,6.23e-18,1;UBERON:0010286,6.23e-18,1;UBERON:0000125,4.41e-17,9;UBERON:0002308,4.41e-17,9;UBERON:0001049,6.73e-14,56;UBERON:0005068,6.73e-14,56;UBERON:0006241,6.73e-14,56;UBERON:0007135,6.73e-14,56;UBERON:0001017,2.84e-12,81;UBERON:0002298,4.07e-12,6;UBERON:0000955,2.98e-11,68;UBERON:0006238,2.98e-11,68;UBERON:0001016,5.13e-11,89;UBERON:0000073,6.95e-11,53;UBERON:0002616,6.95e-11,53;UBERON:0003076,1.15e-10,15;UBERON:0003057,1.15e-10,15;UBERON:0009663,2.24e-10,7;UBERON:0005162,8.69e-10,2;UBERON:0000122,8.69e-10,2;UBERON:0002148,1.44e-09,2;UBERON:0006331,1.44e-09,2;UBERON:0009662,1.44e-09,2;UBERON:0001875,1.71e-09,2;UBERON:0006514,1.71e-09,2;UBERON:0003075,2.03e-09,82;UBERON:0007284,2.03e-09,82;UBERON:0002346,5.78e-09,86;UBERON:0002420,2.85e-08,9;UBERON:0007245,2.85e-08,9;UBERON:0010009,2.85e-08,9;UBERON:0010011,2.85e-08,9;UBERON:0000454,2.85e-08,9;UBERON:0001893,7.06e-08,34;UBERON:0003528,7.87e-08,34;UBERON:0002020,7.87e-08,34;UBERON:0010371,2.39e-07,104;UBERON:0001896,5.80e-07,3;UBERON:0005290,5.80e-07,3;UBERON:0010096,5.80e-07,3;UBERON:0002240,6.88e-07,3;UBERON:0005174,6.88e-07,3;UBERON:0001137,6.88e-07,3;UBERON:0000988,8.62e-07,3|phase1_expression=0.181678379270557,0,0.281908808191942,0,0,0,0,0,0,0,0,0.218441372130172,0.263766978228454,0.123766352960047,0,0,0,0,0,0,0,0.626909442956176,0.286235987131057,0.410623275218653,0.502170558379211,0,0,0,0,0,0,0.919421224478927,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199463657621632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=5364 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9103 | |||
|TSSclassifier=S | |||
|UniProt=O43157 | |||
|association_with_transcript=89bp_to_ENST00000358459,ENST00000358536,NM_002673,uc003csw.2_5end | |||
|description=CAGE_peak_14_at_PLXNB1_5end | |||
|id=chr3:48470775..48470782,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000228;8.01e-18;1!CL:0002372;8.01e-18;1!CL:0000307;8.38e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000228,7.37e-18,1;CL:0002372,7.37e-18,1 | |||
|ontology_enrichment_development_v019=CL:0000377;8.38e-07;3!UBERON:0006241;8.38e-07;3!UBERON:0003057;8.38e-07;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3307;1.38e-09;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3307,1.12e-09,2 | |||
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| |||
|short_description=p14@PLXNB1 | |||
}} |
Revision as of 00:27, 13 September 2013
Short description: | p14@PLXNB1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_14_at_PLXNB1_5end |
Coexpression cluster: | NA |
Association with transcript: | 89bp_to_ENST00000358459, ENST00000358536, NM_002673, uc003csw.2_5end |
EntrezGene: | PLXNB1 |
HGNC: | 9103 |
UniProt: | O43157 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multinucleate cell | 7.37e-18 | 1 |
myotube | 7.37e-18 | 1 |
Ontology term | p-value | n |
---|---|---|
teratoma | 1.12e-09 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.