FFCP PHASE1:Mm9::chr13:52275630..52275635,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=120|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr13:52275630..52275635,+|id=chr13:52275630..52275635,+|ontology_enrichment_celltype=CL:0000181!1.05e-13!5;CL:0000417!1.05e-13!5;CL:0000668!1.05e-13!5;CL:0000412!1.05e-13!5;CL:0000182!1.05e-13!5|ontology_enrichment_celltype_v019_2=CL:0000182,2.05e-22,5|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002107!1.82e-10!22;UBERON:0007499!1.82e-10!22;UBERON:0006925!1.82e-10!22;UBERON:0009497!1.82e-10!22;UBERON:0000015!1.82e-10!22;UBERON:0002423!1.82e-10!22;UBERON:0006235!1.82e-10!22;UBERON:0008835!1.82e-10!22;UBERON:0003894!1.82e-10!22;UBERON:0004161!1.82e-10!22;UBERON:0008836!1.82e-10!22;UBERON:0009854!6.40e-10!23;UBERON:0009856!6.40e-10!23;UBERON:0002365!5.84e-09!25;UBERON:0002330!5.84e-09!25;UBERON:0005172!2.04e-07!49;UBERON:0005173!2.04e-07!49;UBERON:0002417!2.04e-07!49;UBERON:0000916!2.04e-07!49;UBERON:0003914!8.76e-07!47|ontology_enrichment_uberon_v019_2=UBERON:0002107,6.51e-15,22;UBERON:0007499,6.51e-15,22;UBERON:0006925,6.51e-15,22;UBERON:0009497,6.51e-15,22;UBERON:0000015,6.51e-15,22;UBERON:0002423,6.51e-15,22;UBERON:0006235,6.51e-15,22;UBERON:0008835,6.51e-15,22;UBERON:0003894,6.51e-15,22;UBERON:0004161,6.51e-15,22;UBERON:0008836,6.51e-15,22;UBERON:0009854,3.03e-14,23;UBERON:0009856,3.03e-14,23;UBERON:0002365,4.56e-13,25;UBERON:0002330,4.56e-13,25;UBERON:0000305,7.68e-08,1;UBERON:0005256,5.09e-07,45|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,0,3.39985666853875,12.9528765993076,16.8941868536394,49.7309844678042,1.12355536105401,0,0,0,0,0,0,0,0,0,0,12.5602267690966,0,0,0,0,0,0,0.823120949949934,0,1.23597483867187,0.86759614151947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.373220911830279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.268412837520744,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210407459670956,0,0,0,0.123397163921801,0,0,0,0,0,0,0,0.575392274901621,37.4532373850332,0,0,0,0,0.505157755894224,1.07638448113147,149.07504810128,0,0,0,0,0,0,0,0,0,0,0,0,0.172684981865896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164549020602121,0.608929898229199,0,0,0,0,12.1098320021929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218362563746178,0,0,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0762068066549998,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0574354689556133,0,0.115884325944855,0,0,0,0,0,0.238436189947321,0,0,0.169229215783353,0.182927972872773,0,0.135804113845862,0,0,0.0985044823755635,0,0,0,0,0.233931608445408,3.65280791882107,6.69509162240952,0,0|short_description=p@chr13:52275630..52275635,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=120 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr13:52275630..52275635,+ | |||
|id=chr13:52275630..52275635,+ | |||
|ontology_enrichment_celltype=CL:0000181!1.05e-13!5;CL:0000417!1.05e-13!5;CL:0000668!1.05e-13!5;CL:0000412!1.05e-13!5;CL:0000182!1.05e-13!5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,2.05e-22,5 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!1.82e-10!22;UBERON:0007499!1.82e-10!22;UBERON:0006925!1.82e-10!22;UBERON:0009497!1.82e-10!22;UBERON:0000015!1.82e-10!22;UBERON:0002423!1.82e-10!22;UBERON:0006235!1.82e-10!22;UBERON:0008835!1.82e-10!22;UBERON:0003894!1.82e-10!22;UBERON:0004161!1.82e-10!22;UBERON:0008836!1.82e-10!22;UBERON:0009854!6.40e-10!23;UBERON:0009856!6.40e-10!23;UBERON:0002365!5.84e-09!25;UBERON:0002330!5.84e-09!25;UBERON:0005172!2.04e-07!49;UBERON:0005173!2.04e-07!49;UBERON:0002417!2.04e-07!49;UBERON:0000916!2.04e-07!49;UBERON:0003914!8.76e-07!47 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,6.51e-15,22;UBERON:0007499,6.51e-15,22;UBERON:0006925,6.51e-15,22;UBERON:0009497,6.51e-15,22;UBERON:0000015,6.51e-15,22;UBERON:0002423,6.51e-15,22;UBERON:0006235,6.51e-15,22;UBERON:0008835,6.51e-15,22;UBERON:0003894,6.51e-15,22;UBERON:0004161,6.51e-15,22;UBERON:0008836,6.51e-15,22;UBERON:0009854,3.03e-14,23;UBERON:0009856,3.03e-14,23;UBERON:0002365,4.56e-13,25;UBERON:0002330,4.56e-13,25;UBERON:0000305,7.68e-08,1;UBERON:0005256,5.09e-07,45 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,0,3.39985666853875,12.9528765993076,16.8941868536394,49.7309844678042,1.12355536105401,0,0,0,0,0,0,0,0,0,0,12.5602267690966,0,0,0,0,0,0,0.823120949949934,0,1.23597483867187,0.86759614151947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.373220911830279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.268412837520744,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210407459670956,0,0,0,0.123397163921801,0,0,0,0,0,0,0,0.575392274901621,37.4532373850332,0,0,0,0,0.505157755894224,1.07638448113147,149.07504810128,0,0,0,0,0,0,0,0,0,0,0,0,0.172684981865896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164549020602121,0.608929898229199,0,0,0,0,12.1098320021929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218362563746178,0,0,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0762068066549998,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0574354689556133,0,0.115884325944855,0,0,0,0,0,0.238436189947321,0,0,0.169229215783353,0.182927972872773,0,0.135804113845862,0,0,0.0985044823755635,0,0,0,0,0.233931608445408,3.65280791882107,6.69509162240952,0,0 | |||
|short_description=p@chr13:52275630..52275635,+ | |||
}} |
Revision as of 00:44, 13 September 2013
Short description: | p@chr13:52275630..52275635, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr13:52275630..52275635, + |
Coexpression cluster: | MCL_coexpression_mm9:120 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 2.05e-22 | 5 |
Ontology term | p-value | n |
---|---|---|
liver | 6.51e-15 | 22 |
epithelial sac | 6.51e-15 | 22 |
digestive gland | 6.51e-15 | 22 |
epithelium of foregut-midgut junction | 6.51e-15 | 22 |
anatomical boundary | 6.51e-15 | 22 |
hepatobiliary system | 6.51e-15 | 22 |
foregut-midgut junction | 6.51e-15 | 22 |
hepatic diverticulum | 6.51e-15 | 22 |
liver primordium | 6.51e-15 | 22 |
septum transversum | 6.51e-15 | 22 |
liver bud | 6.51e-15 | 22 |
digestive tract diverticulum | 3.03e-14 | 23 |
sac | 3.03e-14 | 23 |
exocrine gland | 4.56e-13 | 25 |
exocrine system | 4.56e-13 | 25 |
amnion | 7.68e-08 | 1 |
trunk mesenchyme | 5.09e-07 | 45 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.