FFCP PHASE1:Mm9::chr14:105658052..105658062,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=76273|HGNC=|MCL_coexpression_id=24|UniProt=|association_with_transcript=17bp_to_ENSMUST00000155351_5end|description=CAGE_peak_8_at_Ndfip2_5end|id=chr14:105658052..105658062,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000239,7.74e-07,6;CL:0000677,7.74e-07,6;CL:0000584,7.74e-07,6;CL:0002321,8.54e-07,70|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!3.82e-09!43;UBERON:0000344!5.52e-08!15;UBERON:0001242!9.14e-07!13;UBERON:0000060!9.14e-07!13;UBERON:0001262!9.14e-07!13;UBERON:0004786!9.14e-07!13|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.56e-12,31;UBERON:0000344,1.32e-08,15;UBERON:0011216,8.82e-08,194;UBERON:0001242,5.13e-07,13;UBERON:0001262,5.13e-07,13;UBERON:0004786,5.13e-07,13|phase1_expression=1.44133962394315,7.32848356042658,9.55498402718026,9.0739263392049,14.5259761684441,3.69334398206158,2.80335168714631,1.67860320474049,0.84473233291,0.70219357896598,0.513653904676515,0.0797721589953364,1.02720437958723,0.874204024189974,0,0.607425802169478,0.699561878128147,0.157731082679119,0.685572168028694,0,1.27564935226605,0.595745707205312,0.783599367416806,4.47978783821539,4.35877634027623,6.89078356938024,6.46142994238612,3.878482188346,6.84084310042946,7.81293402255785,4.6563407237614,0,0.61506478758457,0,0.866554859253824,0.997407872150954,0.612508068787107,0.837063261473815,0.7813353445238,0.523523743973798,0.588231488031014,0.683045484958446,1.45653105909346,0.755380907853464,0.608261587317087,0.550640256485045,0,1.30815093828268,0.878744730937887,0.58328969722285,0.419959264876088,0,0.503347818173209,0,0.336093799142464,0.771778308107841,0.573066879877513,0.515672092277442,0.809265843438391,0,1.90149421051854,0.338844532069132,0,0.449949858640699,0.988866362566974,2.1314403448383,1.19840044207362,0.384218305321555,1.55534418462716,0.945041568321835,1.26194976810829,1.99955689082663,2.42955395046775,1.22490799214954,1.24599112323707,1.83843757322004,1.10115880999389,1.53224805702225,1.0752457327937,1.05509030184155,1.09785172322892,2.08365348222704,1.3959149950069,1.12552522006336,1.22238598221448,1.17851434189467,1.13897344639282,2.23679334990361,2.19605960666234,3.17400552448499,0.579728977403356,2.58127163094416,2.03991400112325,1.07940638327563,2.59910566979068,1.79210754838934,1.12355536105401,0.511290967734173,0.259786004602869,0,0.422530259330042,0,0,7.11066703153331,0.865964164044856,2.53359865475099,0.505524445014783,1.94112595522402,0.517875767294343,0.890652834388949,0.867426633830679,1.52232739156071,0.922461989024234,0.150722640552623,0.940709657085638,0.879666139307728,0.988779870937496,0.578397427679647,0,0.485300549842228,0.220841518460394,0.969750506270444,1.86391761218122,0.878342391034642,0.83778682725382,3.83185582812887,0.239630249011841,0.599902730993408,0.254140454146129,1.04853447583376,0.457500602818626,0.628271760564322,0.869121600961382,0.511430914660661,1.24672826735736,0.486723789203273,1.12023300235348,0.622034853050465,1.0108910337347,0.631325567659422,0.260240885925407,0.459804208866946,1.0803727788321,1.20563854268572,1.29269348387523,0.640568601424249,0.749613796477831,0.258703370739016,0.215567992932842,0.945530400839096,0.351902248327898,0,0.834141747676794,0.696504333044333,0.823128545631774,0.398068533636986,0,0.772043721344145,0.568326998791185,0.414251545071004,0.234526059981096,0.36012412292203,0.710234206755631,0.196764231747404,0.925602677324269,1.16266972375204,1.3413670069981,0.467061369468678,0.493679549740441,0,0.405344047729279,0.877199924551994,0.219550115291051,0.402619256281115,1.26173969138476,0.617427674275707,4.95628174475697,2.3800550999719,0.426576501070468,0.464473343720877,1.41754207454303,1.61346819698674,0.667134131534611,1.52180500890047,0.949058123089023,2.79988223030818,1.75934646160189,2.98434708061726,3.11942539390592,2.69645822596266,3.6743468478698,2.98711909881551,0.189667900953082,0.685491075658373,0,1.4255592949172,0.387904974335251,1.82353131714828,1.13825766823663,1.77132177575523,0.627994911365499,2.46794327843601,1.77871576252289,0.333690211432188,0.393117990226406,0.449724224769707,0,0.72353147925725,0.763877555344259,1.15078454980324,0.972811360650212,0.823684239564244,1.43768206527355,1.86070473834252,1.5601883655728,1.26289438973556,0.717589654087649,0.964887042726734,0.369506380333209,0.947457058852424,0.488894929326078,0.509235257325564,0.469380496577004,0.670025029767263,0.476087281772027,0.975668239288994,0.630540576424764,0.664394068946325,0.797273843287435,0.327726629431476,0.172684981865896,1.15719246865209,0,0.54390568381871,0.983528546038072,0.551873492609465,1.76605648986571,1.52375192569864,0,1.00988370881749,0.94652465824877,1.56175497718655,1.07711698866399,0.955875191810208,0.222798674082394,0.849229592366497,1.61924280669958,1.75353514746787,2.37172666767914,0.642642632843614,0.283880170416537,0.712262414669021,0.162886959353576,0.824850614862677,2.65490276679926,1.21390318077491,0.604647113929502,1.13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| ||
|EntrezGene=76273 | |||
|HGNC= | |||
|MCL_coexpression_id=24 | |||
|UniProt= | |||
|association_with_transcript=17bp_to_ENSMUST00000155351_5end | |||
|description=CAGE_peak_8_at_Ndfip2_5end | |||
|id=chr14:105658052..105658062,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,7.74e-07,6;CL:0000677,7.74e-07,6;CL:0000584,7.74e-07,6;CL:0002321,8.54e-07,70 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!3.82e-09!43;UBERON:0000344!5.52e-08!15;UBERON:0001242!9.14e-07!13;UBERON:0000060!9.14e-07!13;UBERON:0001262!9.14e-07!13;UBERON:0004786!9.14e-07!13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.56e-12,31;UBERON:0000344,1.32e-08,15;UBERON:0011216,8.82e-08,194;UBERON:0001242,5.13e-07,13;UBERON:0001262,5.13e-07,13;UBERON:0004786,5.13e-07,13 | |||
|phase1_expression=1.44133962394315,7.32848356042658,9.55498402718026,9.0739263392049,14.5259761684441,3.69334398206158,2.80335168714631,1.67860320474049,0.84473233291,0.70219357896598,0.513653904676515,0.0797721589953364,1.02720437958723,0.874204024189974,0,0.607425802169478,0.699561878128147,0.157731082679119,0.685572168028694,0,1.27564935226605,0.595745707205312,0.783599367416806,4.47978783821539,4.35877634027623,6.89078356938024,6.46142994238612,3.878482188346,6.84084310042946,7.81293402255785,4.6563407237614,0,0.61506478758457,0,0.866554859253824,0.997407872150954,0.612508068787107,0.837063261473815,0.7813353445238,0.523523743973798,0.588231488031014,0.683045484958446,1.45653105909346,0.755380907853464,0.608261587317087,0.550640256485045,0,1.30815093828268,0.878744730937887,0.58328969722285,0.419959264876088,0,0.503347818173209,0,0.336093799142464,0.771778308107841,0.573066879877513,0.515672092277442,0.809265843438391,0,1.90149421051854,0.338844532069132,0,0.449949858640699,0.988866362566974,2.1314403448383,1.19840044207362,0.384218305321555,1.55534418462716,0.945041568321835,1.26194976810829,1.99955689082663,2.42955395046775,1.22490799214954,1.24599112323707,1.83843757322004,1.10115880999389,1.53224805702225,1.0752457327937,1.05509030184155,1.09785172322892,2.08365348222704,1.3959149950069,1.12552522006336,1.22238598221448,1.17851434189467,1.13897344639282,2.23679334990361,2.19605960666234,3.17400552448499,0.579728977403356,2.58127163094416,2.03991400112325,1.07940638327563,2.59910566979068,1.79210754838934,1.12355536105401,0.511290967734173,0.259786004602869,0,0.422530259330042,0,0,7.11066703153331,0.865964164044856,2.53359865475099,0.505524445014783,1.94112595522402,0.517875767294343,0.890652834388949,0.867426633830679,1.52232739156071,0.922461989024234,0.150722640552623,0.940709657085638,0.879666139307728,0.988779870937496,0.578397427679647,0,0.485300549842228,0.220841518460394,0.969750506270444,1.86391761218122,0.878342391034642,0.83778682725382,3.83185582812887,0.239630249011841,0.599902730993408,0.254140454146129,1.04853447583376,0.457500602818626,0.628271760564322,0.869121600961382,0.511430914660661,1.24672826735736,0.486723789203273,1.12023300235348,0.622034853050465,1.0108910337347,0.631325567659422,0.260240885925407,0.459804208866946,1.0803727788321,1.20563854268572,1.29269348387523,0.640568601424249,0.749613796477831,0.258703370739016,0.215567992932842,0.945530400839096,0.351902248327898,0,0.834141747676794,0.696504333044333,0.823128545631774,0.398068533636986,0,0.772043721344145,0.568326998791185,0.414251545071004,0.234526059981096,0.36012412292203,0.710234206755631,0.196764231747404,0.925602677324269,1.16266972375204,1.3413670069981,0.467061369468678,0.493679549740441,0,0.405344047729279,0.877199924551994,0.219550115291051,0.402619256281115,1.26173969138476,0.617427674275707,4.95628174475697,2.3800550999719,0.426576501070468,0.464473343720877,1.41754207454303,1.61346819698674,0.667134131534611,1.52180500890047,0.949058123089023,2.79988223030818,1.75934646160189,2.98434708061726,3.11942539390592,2.69645822596266,3.6743468478698,2.98711909881551,0.189667900953082,0.685491075658373,0,1.4255592949172,0.387904974335251,1.82353131714828,1.13825766823663,1.77132177575523,0.627994911365499,2.46794327843601,1.77871576252289,0.333690211432188,0.393117990226406,0.449724224769707,0,0.72353147925725,0.763877555344259,1.15078454980324,0.972811360650212,0.823684239564244,1.43768206527355,1.86070473834252,1.5601883655728,1.26289438973556,0.717589654087649,0.964887042726734,0.369506380333209,0.947457058852424,0.488894929326078,0.509235257325564,0.469380496577004,0.670025029767263,0.476087281772027,0.975668239288994,0.630540576424764,0.664394068946325,0.797273843287435,0.327726629431476,0.172684981865896,1.15719246865209,0,0.54390568381871,0.983528546038072,0.551873492609465,1.76605648986571,1.52375192569864,0,1.00988370881749,0.94652465824877,1.56175497718655,1.07711698866399,0.955875191810208,0.222798674082394,0.849229592366497,1.61924280669958,1.75353514746787,2.37172666767914,0.642642632843614,0.283880170416537,0.712262414669021,0.162886959353576,0.824850614862677,2.65490276679926,1.21390318077491,0.604647113929502,1.13163047853539,0.590603785761546,0.307435147943927,1.29214146584111,1.45413491791002,0.356497378384721,0.632073515871632,2.10837217149998,0,1.70219802876894,1.44048875225048,0.646793418913773,0.214337035031592,1.06404140185364,1.60531935841864,0.987294123612726,0.608929898229199,0.23467170806371,0.42366414172764,0.220528398054962,0.65954501176592,0.484393280087717,1.14594557363496,0.477489376012546,0.492422699235184,2.62332752966866,1.66882771809459,0,0.619160603889667,0.370389054739423,0,0.410082683163076,0,1.18984900995699,0.419854356970974,0.690999869022119,0.954670618015114,0.474503990371703,0.203319467126849,0.86404272657441,0.836353184057875,0.436725127492355,0.134864346384821,0.743881101528023,1.57053565190418,1.8146096260851,0.621339313086926,2.25477175473676,0.448549638131936,0.16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| |||
|short_description=p8@Ndfip2 | |||
}} | |||
Revision as of 01:28, 13 September 2013
| Short description: | p8@Ndfip2 |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_8_at_Ndfip2_5end |
| Coexpression cluster: | MCL_coexpression_mm9:24 |
| Association with transcript: | 17bp_to_ENSMUST00000155351_5end |
| EntrezGene: | Ndfip2 |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| brush border epithelial cell | 7.74e-07 | 6 |
| gut absorptive cell | 7.74e-07 | 6 |
| enterocyte | 7.74e-07 | 6 |
| embryonic cell | 8.54e-07 | 70 |
| Ontology term | p-value | n |
|---|---|---|
| intestine | 1.56e-12 | 31 |
| mucosa | 1.32e-08 | 15 |
| organ system subdivision | 8.82e-08 | 194 |
| intestinal mucosa | 5.13e-07 | 13 |
| wall of intestine | 5.13e-07 | 13 |
| gastrointestinal system mucosa | 5.13e-07 | 13 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
