FFCP PHASE1:Hg19::chr4:10041883..10041910,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=56606|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=13446|TSSclassifier=S|UniProt=Q9NRM0|association_with_transcript=-11bp_to_ENST00000309065,NM_001001290,uc003gmd.2,uc003gme.1_5end|coexpression_cluster_id=C21|description=CAGE_peak_4_at_SLC2A9_5end|id=chr4:10041883..10041910,-|ontology_enrichment_celltype=CL:0000080!1.23e-10!6|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0005754;7.37e-18;1!UBERON:0003918;1.54e-15;10!UBERON:0007687;1.54e-15;10!UBERON:0007297;1.33e-09;2|ontology_enrichment_disease=DOID:0060060!5.58e-08!1;DOID:0060061!5.58e-08!1;DOID:8691!5.58e-08!1;DOID:630!9.44e-08!1;DOID:0050177!9.44e-08!1;DOID:0050427!9.44e-08!1|ontology_enrichment_disease_v019=DOID:0060060;5.26e-18;1!DOID:0060061;5.26e-18;1!DOID:8691;5.26e-18;1!DOID:0060058;1.33e-07;10|ontology_enrichment_disease_v019_2=DOID:0060060,5.26e-18,1;DOID:0060061,5.26e-18,1;DOID:8691,5.26e-18,1;DOID:0060058,1.33e-07,10|ontology_enrichment_uberon=UBERON:0006947!5.99e-20!3;UBERON:0004054!5.99e-20!3;UBERON:0005904!4.18e-15!4;UBERON:0003135!2.17e-09!11;UBERON:0000489!7.15e-09!32;UBERON:0002113!5.34e-08!27;UBERON:0003918!5.34e-08!27;UBERON:0005095!5.34e-08!27;UBERON:0007687!5.34e-08!27;UBERON:0000998!6.37e-08!1;UBERON:0006868!6.37e-08!1;UBERON:0001000!8.28e-08!1;UBERON:0005352!8.28e-08!1;UBERON:0002372!1.01e-07!1;UBERON:0001961!1.01e-07!1;UBERON:0001744!1.01e-07!1;UBERON:0001735!1.01e-07!1;UBERON:0001301!1.22e-07!1;UBERON:0006834!1.39e-07!1|ontology_enrichment_uberon_v019=UBERON:0006947;8.99e-23;3!UBERON:0004054;8.99e-23;3!UBERON:0000998;7.37e-18;1!UBERON:0006868;7.37e-18;1!UBERON:0001000;1.44e-17;1!UBERON:0005352;1.44e-17;1!UBERON:0005904;2.39e-17;4!UBERON:0002331;7.83e-16;10!UBERON:0000178;9.14e-11;15!UBERON:0000179;9.14e-11;15!UBERON:0000463;9.14e-11;15!UBERON:0000058;1.67e-07;10!UBERON:0000478;6.22e-07;24!UBERON:0003135;6.74e-07;11!UBERON:0002113;8.86e-07;24!UBERON:0011143;8.86e-07;24|ontology_enrichment_uberon_v019_2=UBERON:0006947,8.99e-23,3;UBERON:0004054,8.99e-23,3;UBERON:0000998,7.37e-18,1;UBERON:0006868,7.37e-18,1;UBERON:0001000,1.44e-17,1;UBERON:0005352,1.44e-17,1;UBERON:0005904,2.39e-17,4;UBERON:0002331,7.83e-16,10;UBERON:0000358,7.83e-16,10;UBERON:0000307,7.83e-16,10;UBERON:0000091,7.83e-16,10;UBERON:0000087,7.83e-16,10;UBERON:0007010,7.83e-16,10;UBERON:0007806,7.83e-16,10;UBERON:0008780,7.83e-16,10;UBERON:0005728,7.83e-16,10;UBERON:0000178,9.14e-11,15;UBERON:0000179,9.14e-11,15;UBERON:0000463,9.14e-11,15;UBERON:0002113,1.81e-10,26;UBERON:0003918,1.81e-10,26;UBERON:0011143,1.81e-10,26;UBERON:0005095,1.81e-10,26;UBERON:0007687,1.81e-10,26;UBERON:0000489,7.96e-09,31;UBERON:0000478,6.22e-07,24;UBERON:0003135,6.74e-07,11|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.305653622991805,0.0821005894499457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.28769239232215,0.256160706529101,0,0,0,0,0,0,0,0,0,0,0,1.59570926097305,0,0,0,0,0,0.521482918420201,0.65156653411535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01950509218015,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.93293947216335,0,0.597743964753209,0,0,0,0.123084805461069,0,0,0,0,0.197286811273867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,42.1060002726483,74.7561830626342,91.264783867768,0,0,0,0,0,0,1.57833761139756,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.52418000472609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.20655980437755,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.39947062590706,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.0919451082428,0,0.0714765441766563,0,0,0,0,0,0,0,2.15113679410139,0,0,4.65725755210022,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0.213233981900981,0,0,0.0620747142958579,0,0,0,0,0,0.673520530145875,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=56606 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13446 | |||
|TSSclassifier=S | |||
|UniProt=Q9NRM0 | |||
|association_with_transcript=-11bp_to_ENST00000309065,NM_001001290,uc003gmd.2,uc003gme.1_5end | |||
|coexpression_cluster_id=C21 | |||
|description=CAGE_peak_4_at_SLC2A9_5end | |||
|id=chr4:10041883..10041910,- | |||
|ontology_enrichment_celltype=CL:0000080!1.23e-10!6 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0005754;7.37e-18;1!UBERON:0003918;1.54e-15;10!UBERON:0007687;1.54e-15;10!UBERON:0007297;1.33e-09;2 | |||
|ontology_enrichment_disease=DOID:0060060!5.58e-08!1;DOID:0060061!5.58e-08!1;DOID:8691!5.58e-08!1;DOID:630!9.44e-08!1;DOID:0050177!9.44e-08!1;DOID:0050427!9.44e-08!1 | |||
|ontology_enrichment_disease_v019=DOID:0060060;5.26e-18;1!DOID:0060061;5.26e-18;1!DOID:8691;5.26e-18;1!DOID:0060058;1.33e-07;10 | |||
|ontology_enrichment_disease_v019_2=DOID:0060060,5.26e-18,1;DOID:0060061,5.26e-18,1;DOID:8691,5.26e-18,1;DOID:0060058,1.33e-07,10 | |||
|ontology_enrichment_uberon=UBERON:0006947!5.99e-20!3;UBERON:0004054!5.99e-20!3;UBERON:0005904!4.18e-15!4;UBERON:0003135!2.17e-09!11;UBERON:0000489!7.15e-09!32;UBERON:0002113!5.34e-08!27;UBERON:0003918!5.34e-08!27;UBERON:0005095!5.34e-08!27;UBERON:0007687!5.34e-08!27;UBERON:0000998!6.37e-08!1;UBERON:0006868!6.37e-08!1;UBERON:0001000!8.28e-08!1;UBERON:0005352!8.28e-08!1;UBERON:0002372!1.01e-07!1;UBERON:0001961!1.01e-07!1;UBERON:0001744!1.01e-07!1;UBERON:0001735!1.01e-07!1;UBERON:0001301!1.22e-07!1;UBERON:0006834!1.39e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0006947;8.99e-23;3!UBERON:0004054;8.99e-23;3!UBERON:0000998;7.37e-18;1!UBERON:0006868;7.37e-18;1!UBERON:0001000;1.44e-17;1!UBERON:0005352;1.44e-17;1!UBERON:0005904;2.39e-17;4!UBERON:0002331;7.83e-16;10!UBERON:0000178;9.14e-11;15!UBERON:0000179;9.14e-11;15!UBERON:0000463;9.14e-11;15!UBERON:0000058;1.67e-07;10!UBERON:0000478;6.22e-07;24!UBERON:0003135;6.74e-07;11!UBERON:0002113;8.86e-07;24!UBERON:0011143;8.86e-07;24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006947,8.99e-23,3;UBERON:0004054,8.99e-23,3;UBERON:0000998,7.37e-18,1;UBERON:0006868,7.37e-18,1;UBERON:0001000,1.44e-17,1;UBERON:0005352,1.44e-17,1;UBERON:0005904,2.39e-17,4;UBERON:0002331,7.83e-16,10;UBERON:0000358,7.83e-16,10;UBERON:0000307,7.83e-16,10;UBERON:0000091,7.83e-16,10;UBERON:0000087,7.83e-16,10;UBERON:0007010,7.83e-16,10;UBERON:0007806,7.83e-16,10;UBERON:0008780,7.83e-16,10;UBERON:0005728,7.83e-16,10;UBERON:0000178,9.14e-11,15;UBERON:0000179,9.14e-11,15;UBERON:0000463,9.14e-11,15;UBERON:0002113,1.81e-10,26;UBERON:0003918,1.81e-10,26;UBERON:0011143,1.81e-10,26;UBERON:0005095,1.81e-10,26;UBERON:0007687,1.81e-10,26;UBERON:0000489,7.96e-09,31;UBERON:0000478,6.22e-07,24;UBERON:0003135,6.74e-07,11 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.305653622991805,0.0821005894499457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.28769239232215,0.256160706529101,0,0,0,0,0,0,0,0,0,0,0,1.59570926097305,0,0,0,0,0,0.521482918420201,0.65156653411535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01950509218015,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.93293947216335,0,0.597743964753209,0,0,0,0.123084805461069,0,0,0,0,0.197286811273867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,42.1060002726483,74.7561830626342,91.264783867768,0,0,0,0,0,0,1.57833761139756,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.52418000472609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.20655980437755,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.39947062590706,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.0919451082428,0,0.0714765441766563,0,0,0,0,0,0,0,2.15113679410139,0,0,4.65725755210022,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0.213233981900981,0,0,0.0620747142958579,0,0,0,0,0,0.673520530145875,0.215166616178029,0,0,0,0,0,0,0.366724332548599,0,0,0,0.961705476909699 | |||
|short_description=p4@SLC2A9 | |||
}} |
Revision as of 01:45, 13 September 2013
Short description: | p4@SLC2A9 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_SLC2A9_5end |
Coexpression cluster: | C21_cord_mycosis_hairy_xeroderma_adult_CD4_anaplastic |
Association with transcript: | -11bp_to_ENST00000309065, NM_001001290, uc003gmd.2, uc003gme.1_5end |
EntrezGene: | SLC2A9 |
HGNC: | 13446 |
UniProt: | Q9NRM0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
male genital duct | 8.99e-23 | 3 |
internal male genitalia | 8.99e-23 | 3 |
seminal vesicle | 7.37e-18 | 1 |
seminal fluid secreting gland | 7.37e-18 | 1 |
vas deferens | 1.44e-17 | 1 |
spermatic cord | 1.44e-17 | 1 |
duct of male reproductive system | 2.39e-17 | 4 |
umbilical cord | 7.83e-16 | 10 |
blastocyst | 7.83e-16 | 10 |
blastula | 7.83e-16 | 10 |
bilaminar disc | 7.83e-16 | 10 |
inner cell mass | 7.83e-16 | 10 |
cleaving embryo | 7.83e-16 | 10 |
connecting stalk | 7.83e-16 | 10 |
inner cell mass derived epiblast | 7.83e-16 | 10 |
extraembryonic mesoderm | 7.83e-16 | 10 |
blood | 9.14e-11 | 15 |
haemolymphatic fluid | 9.14e-11 | 15 |
organism substance | 9.14e-11 | 15 |
kidney | 1.81e-10 | 26 |
kidney mesenchyme | 1.81e-10 | 26 |
upper urinary tract | 1.81e-10 | 26 |
kidney rudiment | 1.81e-10 | 26 |
kidney field | 1.81e-10 | 26 |
cavitated compound organ | 7.96e-09 | 31 |
extraembryonic structure | 6.22e-07 | 24 |
male reproductive organ | 6.74e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
non-Hodgkin lymphoma | 5.26e-18 | 1 |
cutaneous T cell lymphoma | 5.26e-18 | 1 |
mycosis fungoides | 5.26e-18 | 1 |
lymphoma | 1.33e-07 | 10 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.