FFCP PHASE1:Hg19::chr4:103749293..103749303,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=7323|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=12476|TSSclassifier=S|UniProt=P61077|association_with_transcript=3bp_to_NM_181889,uc003hwp.2_5end|description=CAGE_peak_30_at_UBE2D3_5end|id=chr4:103749293..103749303,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:1001319;1.04e-13;1!CL:1000600;1.04e-13;1!CL:0000047;1.70e-07;2!CL:0000764;1.70e-07;2!CL:0000317;1.70e-07;2!CL:1000448;1.70e-07;2!CL:0002308;1.70e-07;2!CL:0002140;1.70e-07;2!CL:0000558;1.70e-07;2|ontology_enrichment_celltype_v019_2=CL:1001319,2.07e-13,1;CL:1000600,2.07e-13,1;CL:0000317,1.54e-07,2;CL:1000448,1.54e-07,2;CL:0002308,1.54e-07,2;CL:0002140,1.54e-07,2;CL:0000764,2.12e-07,2;CL:0000765,2.12e-07,2;CL:0000050,2.12e-07,2;CL:0000038,2.12e-07,2;CL:0000558,2.12e-07,2;CL:0000547,2.12e-07,2;CL:0000549,2.12e-07,2;CL:0000550,2.12e-07,2;CL:0000552,2.12e-07,2;CL:0000047,3.05e-07,8|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:305!9.07e-07!106|ontology_enrichment_disease_v019=DOID:3307;1.70e-07;2|ontology_enrichment_disease_v019_2=DOID:3307,1.20e-07,2|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=UBERON:0004645;1.04e-13;1!UBERON:0001256;1.04e-13;1!UBERON:0001259;1.04e-13;1!UBERON:0001255;1.70e-07;2!UBERON:0002419;1.70e-07;2!UBERON:0007771;1.70e-07;2!UBERON:0003297;1.70e-07;2!UBERON:0001821;1.70e-07;2!UBERON:0003487;1.70e-07;2!UBERON:0001820;1.70e-07;2!UBERON:0001556;1.70e-07;2!UBERON:0000473;2.37e-07;8|ontology_enrichment_uberon_v019_2=UBERON:0004645,2.07e-13,1;UBERON:0001256,2.07e-13,1;UBERON:0001259,2.07e-13,1;UBERON:0002419,1.54e-07,2;UBERON:0007771,1.54e-07,2;UBERON:0003297,1.54e-07,2;UBERON:0001821,1.54e-07,2;UBERON:0003487,1.54e-07,2;UBERON:0001820,1.54e-07,2;UBERON:0005089,1.54e-07,2;UBERON:0005088,1.54e-07,2;UBERON:0000473,2.37e-07,8;UBERON:0001255,2.40e-07,2;UBERON:0001556,2.40e-07,2|phase1_expression=0.181678379270557,0,0,0,0.446961094427288,0,0,0,0.261185628199839,0,0,0.218441372130172,0,0,0,0,0,0,0,0,0,0,0,0.273748850145768,0,0.382067028739756,0.246301768349837,0.472264687882075,0,0,0,0,0.30120591877825,0.369754010166788,0.0774672005803016,0,0,0,0,0,0.223915474239924,0,0,0,0,0.242584061187816,0,0,0.619412741790207,0.28769239232215,0.256160706529101,0,0,0,0,0.564727018627814,0.818718450173537,0.449446968890169,1.22433556948361,0.962787081228281,0,0,0.398927315243264,0.852449501065388,0.290209238628584,0,0,0.502497330513487,0,0.217188844705117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.889509253863555,0,0,0,0,0,0,0,0,0,0,0,0.196709770113833,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0.189069634328136,0,0,1.30979075497713,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0.56530794192401,0,0.275118041940067,0,0,0,0,0.402829317109147,0,0,0,0,0.267899184852239,0,0,0,0,0.183201743930407,0,0,0,0,0.12663051166458,0,0,0,0,0,0,0,0.134710672069688,0.326923806226917,0,0,0.234321431833797,0,0,0,0.117434498643765,0.647491777472526,0.421352420106746,0,0.122834317311768,0.103325781175765,0,0,0,0,0.168336113954066,0.250237039743928,0.277064115484183,0.438977620880838,0,0,0,0.179389635688862,0,0,0.300091096084402,0.103052529238439,0,0,0.168776332241266,0,0,0.0920498986422993,0.161646056818812,0.355009592516614,0,0,0.386521706326594,0.272746120590835,0.860413786167011,0.243947412259191,0.397589304964456,0.929551542956147,0.414644220061482,0.504641701751257,1.09493207722749,0,0,0,0,0,0.236613600079688,0.168584690078102,0,0.330881918197182,0.217879444092406,0,0.269662616320329,0,0,0,0,0,0,0,0,0,0,0.368965315629341,0,0.439001141634502,0,0,0,0,0,0,0,0.117408694235822,0,0.462985512576611,0.190254152234598,0,0,0,0.234004265139238,0,0,0.16798212819886,0.283550194484773,0.179117045405697,0,0,0,0.264145302039678,0,0.288239906833923,0,0,0,0,0,0.102827492703324,0.300343057843917,0,0,0,0.1466765716419,0.258543431515556,0,0,0.26593811658487,0,0.257207374262142,0,0.266422179016099,0,0,0,0,0,0.791951872933429,0,0,0.299918973546171,0,0,0,0,0,0,0.434343920002738,0.205476322550383,0.358121926479791,0,0,0,0,0,1.30139853857622,0,0.167516265334349,0,0,0,0.828831026872071,0,0,0.271265023699736,0,0,0,0,0,0,0,0,0.184369168541703,0.173767228936166,0.391602314925481,0,0,0.215714200818617,0.106727557803444,0.909382714338778,0,0,0,0.153461973288062,0,0.128139149255701,0,0,0,0,0.177561725313127,0.0821271560138091,0,0.232420756919918,0.120859449591622,0.200506470303285,0.552485933615378,0,0.182091168006717,0.262248829918848,0,0.15403067420883,0,0,0.316654886678627,0,0.170093705276516,0.215915916102139,0,0,0,0.254876273045038,0,0,1.09629938322967,0.522870902049801,0,0,0,0.9273691048295,0,0.082509499920588,0.574265537996172,1.30012049207304,0,0,0.308097234229289,0.15350367472613,0.137836572484531,0.107420244868274,0,0.340906509664404,0.178064071293475,0,0.384380134730212,0.127612712494584,0.10115778085555,0,0,0,0,0.532306030317022,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.421258456238981,0,0,0,0,0.141405431953713,0,0,0,0.876901770507525,0,0,0.40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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=7323 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12476 | |||
|TSSclassifier=S | |||
|UniProt=P61077 | |||
|association_with_transcript=3bp_to_NM_181889,uc003hwp.2_5end | |||
|description=CAGE_peak_30_at_UBE2D3_5end | |||
|id=chr4:103749293..103749303,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:1001319;1.04e-13;1!CL:1000600;1.04e-13;1!CL:0000047;1.70e-07;2!CL:0000764;1.70e-07;2!CL:0000317;1.70e-07;2!CL:1000448;1.70e-07;2!CL:0002308;1.70e-07;2!CL:0002140;1.70e-07;2!CL:0000558;1.70e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:1001319,2.07e-13,1;CL:1000600,2.07e-13,1;CL:0000317,1.54e-07,2;CL:1000448,1.54e-07,2;CL:0002308,1.54e-07,2;CL:0002140,1.54e-07,2;CL:0000764,2.12e-07,2;CL:0000765,2.12e-07,2;CL:0000050,2.12e-07,2;CL:0000038,2.12e-07,2;CL:0000558,2.12e-07,2;CL:0000547,2.12e-07,2;CL:0000549,2.12e-07,2;CL:0000550,2.12e-07,2;CL:0000552,2.12e-07,2;CL:0000047,3.05e-07,8 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!9.07e-07!106 | |||
|ontology_enrichment_disease_v019=DOID:3307;1.70e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3307,1.20e-07,2 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0004645;1.04e-13;1!UBERON:0001256;1.04e-13;1!UBERON:0001259;1.04e-13;1!UBERON:0001255;1.70e-07;2!UBERON:0002419;1.70e-07;2!UBERON:0007771;1.70e-07;2!UBERON:0003297;1.70e-07;2!UBERON:0001821;1.70e-07;2!UBERON:0003487;1.70e-07;2!UBERON:0001820;1.70e-07;2!UBERON:0001556;1.70e-07;2!UBERON:0000473;2.37e-07;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004645,2.07e-13,1;UBERON:0001256,2.07e-13,1;UBERON:0001259,2.07e-13,1;UBERON:0002419,1.54e-07,2;UBERON:0007771,1.54e-07,2;UBERON:0003297,1.54e-07,2;UBERON:0001821,1.54e-07,2;UBERON:0003487,1.54e-07,2;UBERON:0001820,1.54e-07,2;UBERON:0005089,1.54e-07,2;UBERON:0005088,1.54e-07,2;UBERON:0000473,2.37e-07,8;UBERON:0001255,2.40e-07,2;UBERON:0001556,2.40e-07,2 | |||
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| |||
|short_description=p30@UBE2D3 | |||
}} |
Revision as of 01:53, 13 September 2013
Short description: | p30@UBE2D3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_30_at_UBE2D3_5end |
Coexpression cluster: | NA |
Association with transcript: | 3bp_to_NM_181889, uc003hwp.2_5end |
EntrezGene: | UBE2D3 |
HGNC: | 12476 |
UniProt: | P61077 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bladder cell | 2.07e-13 | 1 |
lower urinary tract cell | 2.07e-13 | 1 |
sebum secreting cell | 1.54e-07 | 2 |
epithelial cell of sweat gland | 1.54e-07 | 2 |
epithelial cell of skin gland | 1.54e-07 | 2 |
acinar cell of sebaceous gland | 1.54e-07 | 2 |
erythroid lineage cell | 2.12e-07 | 2 |
erythroblast | 2.12e-07 | 2 |
megakaryocyte-erythroid progenitor cell | 2.12e-07 | 2 |
erythroid progenitor cell | 2.12e-07 | 2 |
reticulocyte | 2.12e-07 | 2 |
proerythroblast | 2.12e-07 | 2 |
basophilic erythroblast | 2.12e-07 | 2 |
polychromatophilic erythroblast | 2.12e-07 | 2 |
orthochromatic erythroblast | 2.12e-07 | 2 |
neuronal stem cell | 3.05e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
urinary bladder urothelium | 2.07e-13 | 1 |
wall of urinary bladder | 2.07e-13 | 1 |
mucosa of urinary bladder | 2.07e-13 | 1 |
skin gland | 1.54e-07 | 2 |
epidermis gland | 1.54e-07 | 2 |
gland of integumental system | 1.54e-07 | 2 |
sebaceous gland | 1.54e-07 | 2 |
skin sebaceous gland | 1.54e-07 | 2 |
sweat gland | 1.54e-07 | 2 |
sweat gland placode | 1.54e-07 | 2 |
sebaceous gland placode | 1.54e-07 | 2 |
testis | 2.37e-07 | 8 |
urinary bladder | 2.40e-07 | 2 |
lower urinary tract | 2.40e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
teratoma | 1.20e-07 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.