FFCP PHASE1:Hg19::chr4:108815559..108815563,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=166929|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=28395|TSSclassifier=S|UniProt=E5RGG5|association_with_transcript=155bp_to_ENST00000503385_5end|coexpression_cluster_id=C216|description=CAGE_peak_11_at_SGMS2_5end|id=chr4:108815559..108815563,+|ontology_enrichment_celltype=CL:0000062!1.28e-07!11;CL:0000375!1.28e-07!11;CL:0000335!1.28e-07!11;CL:0000035!5.31e-07!20|ontology_enrichment_celltype_v019=CL:0000062;5.74e-23;9|ontology_enrichment_celltype_v019_2=CL:0000062,5.14e-19,11;CL:0000375,5.14e-19,11;CL:0000335,5.14e-19,11|ontology_enrichment_development_v019=CL:0000335;5.14e-19;11|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000369!9.46e-20!4;UBERON:0002435!9.46e-20!4;UBERON:0000204!9.46e-20!4;UBERON:0010082!9.46e-20!4;UBERON:0000007!1.89e-18!2;UBERON:0001873!5.28e-18!2;UBERON:0010122!5.28e-18!2;UBERON:0005383!2.54e-12!3;UBERON:0005382!2.54e-12!3;UBERON:0002780!8.56e-12!41;UBERON:0001890!8.56e-12!41;UBERON:0006240!8.56e-12!41;UBERON:0007023!9.44e-12!115;UBERON:0001894!1.57e-11!7;UBERON:0009663!1.57e-11!7;UBERON:0006222!1.57e-11!7;UBERON:0003080!1.70e-11!42;UBERON:0001049!1.98e-10!57;UBERON:0005068!1.98e-10!57;UBERON:0006241!1.98e-10!57;UBERON:0007135!1.98e-10!57;UBERON:0001882!6.88e-10!1;UBERON:0005403!6.88e-10!1;UBERON:0002336!8.17e-10!1;UBERON:0001018!8.17e-10!1;UBERON:0002473!8.17e-10!1;UBERON:0005340!8.17e-10!1;UBERON:0002316!8.17e-10!1;UBERON:0003544!8.17e-10!1;UBERON:0001020!8.17e-10!1;UBERON:0005970!8.17e-10!1;UBERON:0002437!8.17e-10!1;UBERON:0003056!1.04e-09!61;UBERON:0003296!1.10e-09!4;UBERON:0010133!1.10e-09!4;UBERON:0006834!1.76e-09!1;UBERON:0002902!2.46e-09!1;UBERON:0009899!2.46e-09!1;UBERON:0002308!4.43e-09!9;UBERON:0002420!4.43e-09!9;UBERON:0000125!4.43e-09!9;UBERON:0007245!4.43e-09!9;UBERON:0010009!4.43e-09!9;UBERON:0010011!4.43e-09!9;UBERON:0000454!4.43e-09!9;UBERON:0003075!4.12e-08!86;UBERON:0007284!4.12e-08!86;UBERON:0005743!5.30e-08!86;UBERON:0002616!6.12e-08!59;UBERON:0002346!1.10e-07!90;UBERON:0000073!4.09e-07!94;UBERON:0001016!4.09e-07!94;UBERON:0001017!8.55e-07!82|ontology_enrichment_uberon_v019=UBERON:0000007;1.55e-98;2!UBERON:0003296;5.14e-50;4!UBERON:0010133;5.14e-50;4!UBERON:0001894;3.65e-29;7!UBERON:0001474;4.55e-12;18!UBERON:0004765;1.11e-08;26|ontology_enrichment_uberon_v019_2=UBERON:0000007,1.55e-98,2;UBERON:0003296,5.14e-50,4;UBERON:0010133,5.14e-50,4;UBERON:0001894,3.65e-29,7;UBERON:0006222,3.65e-29,7|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223915474239924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.239624855491583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.640986253728404,1.15513299888823,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.885741385813839,0.60298219312704,0,0,0,0,0,0,0.153900517007594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606610196826093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.314408610199332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.706521476061055,0,0,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,58.2824530800685,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.03482802118316,2.95960848756687,0,0,0,0,0,0,0,0,0,0,0,0,0,0.929195074296532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0.45178432815584,0,0,0,0,0,0,0,0,0,0.4226557275834,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103432995861895,0.852935927603924,0,0,0,0,0,0,0,0,0,0.0717222053926763,0,0,0,0,0,0,0.122241444182866,0,0,0,0|short_description=p11@SGMS2}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=166929 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28395 | |||
|TSSclassifier=S | |||
|UniProt=E5RGG5 | |||
|association_with_transcript=155bp_to_ENST00000503385_5end | |||
|coexpression_cluster_id=C216 | |||
|description=CAGE_peak_11_at_SGMS2_5end | |||
|id=chr4:108815559..108815563,+ | |||
|ontology_enrichment_celltype=CL:0000062!1.28e-07!11;CL:0000375!1.28e-07!11;CL:0000335!1.28e-07!11;CL:0000035!5.31e-07!20 | |||
|ontology_enrichment_celltype_v019=CL:0000062;5.74e-23;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000062,5.14e-19,11;CL:0000375,5.14e-19,11;CL:0000335,5.14e-19,11 | |||
|ontology_enrichment_development_v019=CL:0000335;5.14e-19;11 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000369!9.46e-20!4;UBERON:0002435!9.46e-20!4;UBERON:0000204!9.46e-20!4;UBERON:0010082!9.46e-20!4;UBERON:0000007!1.89e-18!2;UBERON:0001873!5.28e-18!2;UBERON:0010122!5.28e-18!2;UBERON:0005383!2.54e-12!3;UBERON:0005382!2.54e-12!3;UBERON:0002780!8.56e-12!41;UBERON:0001890!8.56e-12!41;UBERON:0006240!8.56e-12!41;UBERON:0007023!9.44e-12!115;UBERON:0001894!1.57e-11!7;UBERON:0009663!1.57e-11!7;UBERON:0006222!1.57e-11!7;UBERON:0003080!1.70e-11!42;UBERON:0001049!1.98e-10!57;UBERON:0005068!1.98e-10!57;UBERON:0006241!1.98e-10!57;UBERON:0007135!1.98e-10!57;UBERON:0001882!6.88e-10!1;UBERON:0005403!6.88e-10!1;UBERON:0002336!8.17e-10!1;UBERON:0001018!8.17e-10!1;UBERON:0002473!8.17e-10!1;UBERON:0005340!8.17e-10!1;UBERON:0002316!8.17e-10!1;UBERON:0003544!8.17e-10!1;UBERON:0001020!8.17e-10!1;UBERON:0005970!8.17e-10!1;UBERON:0002437!8.17e-10!1;UBERON:0003056!1.04e-09!61;UBERON:0003296!1.10e-09!4;UBERON:0010133!1.10e-09!4;UBERON:0006834!1.76e-09!1;UBERON:0002902!2.46e-09!1;UBERON:0009899!2.46e-09!1;UBERON:0002308!4.43e-09!9;UBERON:0002420!4.43e-09!9;UBERON:0000125!4.43e-09!9;UBERON:0007245!4.43e-09!9;UBERON:0010009!4.43e-09!9;UBERON:0010011!4.43e-09!9;UBERON:0000454!4.43e-09!9;UBERON:0003075!4.12e-08!86;UBERON:0007284!4.12e-08!86;UBERON:0005743!5.30e-08!86;UBERON:0002616!6.12e-08!59;UBERON:0002346!1.10e-07!90;UBERON:0000073!4.09e-07!94;UBERON:0001016!4.09e-07!94;UBERON:0001017!8.55e-07!82 | |||
|ontology_enrichment_uberon_v019=UBERON:0000007;1.55e-98;2!UBERON:0003296;5.14e-50;4!UBERON:0010133;5.14e-50;4!UBERON:0001894;3.65e-29;7!UBERON:0001474;4.55e-12;18!UBERON:0004765;1.11e-08;26 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000007,1.55e-98,2;UBERON:0003296,5.14e-50,4;UBERON:0010133,5.14e-50,4;UBERON:0001894,3.65e-29,7;UBERON:0006222,3.65e-29,7 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223915474239924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.239624855491583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.640986253728404,1.15513299888823,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.885741385813839,0.60298219312704,0,0,0,0,0,0,0.153900517007594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606610196826093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.314408610199332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.706521476061055,0,0,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,58.2824530800685,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.03482802118316,2.95960848756687,0,0,0,0,0,0,0,0,0,0,0,0,0,0.929195074296532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0.45178432815584,0,0,0,0,0,0,0,0,0,0.4226557275834,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103432995861895,0.852935927603924,0,0,0,0,0,0,0,0,0,0.0717222053926763,0,0,0,0,0,0,0.122241444182866,0,0,0,0 | |||
|short_description=p11@SGMS2 | |||
}} |
Revision as of 01:58, 13 September 2013
Short description: | p11@SGMS2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_11_at_SGMS2_5end |
Coexpression cluster: | C216_osteosarcoma_Smooth_Mesenchymal_large_neuroectodermal_acute_CD34 |
Association with transcript: | 155bp_to_ENST00000503385_5end |
EntrezGene: | SGMS2 |
HGNC: | 28395 |
UniProt: | E5RGG5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
osteoblast | 5.14e-19 | 11 |
osteoprogenitor cell | 5.14e-19 | 11 |
mesenchyme condensation cell | 5.14e-19 | 11 |
Ontology term | p-value | n |
---|---|---|
pituitary gland | 1.55e-98 | 2 |
gland of diencephalon | 5.14e-50 | 4 |
neuroendocrine gland | 5.14e-50 | 4 |
diencephalon | 3.65e-29 | 7 |
future diencephalon | 3.65e-29 | 7 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.