FFCP PHASE1:Hg19::chr4:109092943..109092955,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA|HGNC=|TSSclassifier=S|UniProt=|association_with_transcript=16bp_to_ENST00000508266_5end|coexpression_cluster_id=C1225|description=CAGE_peak_4_at_ENST00000508266_5end|id=chr4:109092943..109092955,+|ontology_enrichment_celltype=CL:0000084!2.79e-29!25;CL:0000827!2.79e-29!25;CL:0000791!6.71e-29!18;CL:0000789!6.71e-29!18;CL:0002420!6.71e-29!18;CL:0002419!6.71e-29!18;CL:0000790!6.71e-29!18;CL:0000838!5.50e-18!52;CL:0000625!1.36e-17!11;CL:0000542!1.58e-17!53;CL:0000051!1.58e-17!53;CL:0000624!3.19e-15!6;CL:0000898!2.43e-08!3;CL:0002087!4.40e-08!119;CL:0000842!4.48e-08!3;CL:0000738!6.44e-08!140;CL:0000623!6.92e-08!3;CL:0000825!6.92e-08!3;CL:0000037!6.56e-07!172;CL:0000566!6.56e-07!172|ontology_enrichment_celltype_v019=CL:0000084;5.61e-44;25!CL:0000791;1.52e-36;18!CL:0000789;1.52e-36;18!CL:0002419;1.52e-36;18!CL:0000625;3.55e-22;11!CL:0000624;1.40e-18;6!CL:0000542;9.03e-13;53!CL:0000898;2.65e-10;3!CL:0002032;4.10e-08;1!CL:0000817;4.10e-08;1!CL:0000557;4.10e-08;1!CL:0000895;4.10e-08;1|ontology_enrichment_celltype_v019_2=CL:0000084,3.36e-44,25;CL:0000827,3.36e-44,25;CL:0000791,1.05e-36,18;CL:0000789,1.05e-36,18;CL:0002420,1.05e-36,18;CL:0002419,1.05e-36,18;CL:0000790,1.05e-36,18;CL:0000838,2.55e-23,52;CL:0000542,7.90e-23,53;CL:0000051,7.90e-23,53;CL:0000625,2.15e-22,11;CL:0000624,1.64e-18,6;CL:0002087,1.97e-10,115;CL:0000898,3.27e-10,3;CL:0002031,1.67e-08,120;CL:0000738,2.14e-08,136;CL:0000810,6.24e-08,1;CL:0000895,6.24e-08,1;CL:0002436,6.24e-08,1;CL:0002427,6.24e-08,1;CL:0002428,6.24e-08,1;CL:0002429,6.24e-08,1;CL:0002433,6.24e-08,1;CL:0002431,6.24e-08,1;CL:0002432,6.24e-08,1;CL:0000037,2.67e-07,168;CL:0000988,8.87e-07,177|ontology_enrichment_development_v019=CL:0000790;1.52e-36;18!CL:0000051;9.03e-13;53!CL:0002427;4.10e-08;1|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000178!6.46e-15!15;UBERON:0000179!6.46e-15!15;UBERON:0000463!6.46e-15!15;UBERON:0002370!9.57e-07!4;UBERON:0005058!9.57e-07!4;UBERON:0009113!9.57e-07!4;UBERON:0003295!9.57e-07!4;UBERON:0005562!9.57e-07!4|ontology_enrichment_uberon_v019=UBERON:0002370;1.77e-15;2!UBERON:0005058;1.77e-15;2!UBERON:0009113;1.77e-15;2!UBERON:0000178;3.83e-11;15!UBERON:0000179;3.83e-11;15!UBERON:0000463;3.83e-11;15!UBERON:0002390;4.43e-11;32!UBERON:0002193;1.38e-08;42!UBERON:0000029;2.02e-08;1|ontology_enrichment_uberon_v019_2=UBERON:0002370,2.38e-16,4;UBERON:0005058,2.38e-16,4;UBERON:0009113,2.38e-16,4;UBERON:0003295,2.38e-16,4;UBERON:0005562,2.38e-16,4;UBERON:0003351,4.44e-11,6;UBERON:0000178,5.10e-11,15;UBERON:0000179,5.10e-11,15;UBERON:0000463,5.10e-11,15;UBERON:0004177,1.45e-09,7;UBERON:0005057,1.45e-09,7;UBERON:0000029,2.02e-08,1;UBERON:0000974,7.88e-07,10;UBERON:0003408,7.88e-07,10;UBERON:0001042,7.88e-07,10;UBERON:0009145,7.88e-07,10|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0,0,0,0,0,0.393364276848904,0,0,0,0,0,0,0,0,0.553995408531877,0.200544447470142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0.983548850569165,1.57204305099666,1.23360899399706,0.167186495390678,4.56291173287027,5.20792586308207,0,0,0.294605907474837,0,0,0,0,0.657751618414705,1.38175008892924,0.579606171470105,5.19002971067211,6.42097987415311,4.18142095219907,0.113309342697566,1.14966148080576,0.34362744548263,0.759059076058509,1.91139248594458,3.90650072313851,0,1.80690142893327,2.17577238962511,1.24930726552346,2.60454977248419,0,0.201606743224732,0.267440195783507,0.724122019413995,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.882926198829301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12624243342638,0,0.381988425558278,0,0,0,1.20137223137567,0,0,0,0,0,0,0,0,0,0.257207374262142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0.862510299438069,0.898401253958239,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03384013061444,0.431428401637234,0.74709290462411,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.507447609232169,1.52927441428475,1.13929437434833,0.714695326373367,1.23408681925858,1.29694662238543,0.540031437238115,0,0,0,0,0,1.44269212976445,1.63626239701352,1.27541018183058,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,3.06579894587209,0.470940769185074,0.166211681900156,0,0,0,0,0,0,0,0,0,0,0,0.611030144933625,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=16bp_to_ENST00000508266_5end | |||
|coexpression_cluster_id=C1225 | |||
|description=CAGE_peak_4_at_ENST00000508266_5end | |||
|id=chr4:109092943..109092955,+ | |||
|ontology_enrichment_celltype=CL:0000084!2.79e-29!25;CL:0000827!2.79e-29!25;CL:0000791!6.71e-29!18;CL:0000789!6.71e-29!18;CL:0002420!6.71e-29!18;CL:0002419!6.71e-29!18;CL:0000790!6.71e-29!18;CL:0000838!5.50e-18!52;CL:0000625!1.36e-17!11;CL:0000542!1.58e-17!53;CL:0000051!1.58e-17!53;CL:0000624!3.19e-15!6;CL:0000898!2.43e-08!3;CL:0002087!4.40e-08!119;CL:0000842!4.48e-08!3;CL:0000738!6.44e-08!140;CL:0000623!6.92e-08!3;CL:0000825!6.92e-08!3;CL:0000037!6.56e-07!172;CL:0000566!6.56e-07!172 | |||
|ontology_enrichment_celltype_v019=CL:0000084;5.61e-44;25!CL:0000791;1.52e-36;18!CL:0000789;1.52e-36;18!CL:0002419;1.52e-36;18!CL:0000625;3.55e-22;11!CL:0000624;1.40e-18;6!CL:0000542;9.03e-13;53!CL:0000898;2.65e-10;3!CL:0002032;4.10e-08;1!CL:0000817;4.10e-08;1!CL:0000557;4.10e-08;1!CL:0000895;4.10e-08;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000084,3.36e-44,25;CL:0000827,3.36e-44,25;CL:0000791,1.05e-36,18;CL:0000789,1.05e-36,18;CL:0002420,1.05e-36,18;CL:0002419,1.05e-36,18;CL:0000790,1.05e-36,18;CL:0000838,2.55e-23,52;CL:0000542,7.90e-23,53;CL:0000051,7.90e-23,53;CL:0000625,2.15e-22,11;CL:0000624,1.64e-18,6;CL:0002087,1.97e-10,115;CL:0000898,3.27e-10,3;CL:0002031,1.67e-08,120;CL:0000738,2.14e-08,136;CL:0000810,6.24e-08,1;CL:0000895,6.24e-08,1;CL:0002436,6.24e-08,1;CL:0002427,6.24e-08,1;CL:0002428,6.24e-08,1;CL:0002429,6.24e-08,1;CL:0002433,6.24e-08,1;CL:0002431,6.24e-08,1;CL:0002432,6.24e-08,1;CL:0000037,2.67e-07,168;CL:0000988,8.87e-07,177 | |||
|ontology_enrichment_development_v019=CL:0000790;1.52e-36;18!CL:0000051;9.03e-13;53!CL:0002427;4.10e-08;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!6.46e-15!15;UBERON:0000179!6.46e-15!15;UBERON:0000463!6.46e-15!15;UBERON:0002370!9.57e-07!4;UBERON:0005058!9.57e-07!4;UBERON:0009113!9.57e-07!4;UBERON:0003295!9.57e-07!4;UBERON:0005562!9.57e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0002370;1.77e-15;2!UBERON:0005058;1.77e-15;2!UBERON:0009113;1.77e-15;2!UBERON:0000178;3.83e-11;15!UBERON:0000179;3.83e-11;15!UBERON:0000463;3.83e-11;15!UBERON:0002390;4.43e-11;32!UBERON:0002193;1.38e-08;42!UBERON:0000029;2.02e-08;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,2.38e-16,4;UBERON:0005058,2.38e-16,4;UBERON:0009113,2.38e-16,4;UBERON:0003295,2.38e-16,4;UBERON:0005562,2.38e-16,4;UBERON:0003351,4.44e-11,6;UBERON:0000178,5.10e-11,15;UBERON:0000179,5.10e-11,15;UBERON:0000463,5.10e-11,15;UBERON:0004177,1.45e-09,7;UBERON:0005057,1.45e-09,7;UBERON:0000029,2.02e-08,1;UBERON:0000974,7.88e-07,10;UBERON:0003408,7.88e-07,10;UBERON:0001042,7.88e-07,10;UBERON:0009145,7.88e-07,10 | |||
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|short_description=p4@ENST00000508266 | |||
}} |
Revision as of 02:00, 13 September 2013
Short description: | p4@ENST00000508266 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_ENST00000508266_5end |
Coexpression cluster: | C1225_thymus_acute_CD4_CD8_Hodgkin_Peripheral_lymph |
Association with transcript: | 16bp_to_ENST00000508266_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
thymus | 2.38e-16 | 4 |
hemolymphoid system gland | 2.38e-16 | 4 |
thymic region | 2.38e-16 | 4 |
pharyngeal gland | 2.38e-16 | 4 |
thymus primordium | 2.38e-16 | 4 |
pharyngeal epithelium | 4.44e-11 | 6 |
blood | 5.10e-11 | 15 |
haemolymphatic fluid | 5.10e-11 | 15 |
organism substance | 5.10e-11 | 15 |
hemopoietic organ | 1.45e-09 | 7 |
immune organ | 1.45e-09 | 7 |
lymph node | 2.02e-08 | 1 |
neck | 7.88e-07 | 10 |
gland of gut | 7.88e-07 | 10 |
chordate pharynx | 7.88e-07 | 10 |
pharyngeal region of foregut | 7.88e-07 | 10 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.