FFCP PHASE1:Hg19::chr4:1164817..1164847,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=10417|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=11253|TSSclassifier=S|UniProt=|association_with_transcript=10bp_to_ENST00000509697_5end|coexpression_cluster_id=C574|description=CAGE_peak_5_at_SPON2_5end|id=chr4:1164817..1164847,-|ontology_enrichment_celltype=CL:0000723!1.01e-11!436;CL:0000048!1.15e-11!430;CL:0000136!2.62e-11!15;CL:0000034!7.84e-11!444;CL:0000057!1.41e-10!75;CL:0000055!1.49e-10!180;CL:0002320!2.70e-09!365;CL:0002334!4.29e-08!12;CL:0000134!7.35e-08!358;CL:0000325!1.31e-07!39;CL:0000219!6.68e-07!390|ontology_enrichment_celltype_v019=CL:0000136;2.54e-12;13!CL:0002334;3.43e-12;12!CL:0002615;2.99e-09;3!CL:0002622;6.70e-09;3!CL:0002504;1.07e-08;3!CL:1000279;1.07e-08;3!CL:1000280;1.07e-08;3!CL:0002521;1.45e-08;3!CL:0002567;5.74e-08;3!CL:0002570;1.60e-07;8!CL:0000134;1.74e-07;55!CL:0000723;4.09e-07;61|ontology_enrichment_celltype_v019_2=CL:0000136,4.38e-16,15;CL:0000048,1.19e-12,427;CL:0000723,3.03e-12,433;CL:0002334,4.06e-12,12;CL:0000034,1.01e-11,441;CL:0002615,3.00e-09,3;CL:0002622,5.24e-09,3;CL:0000134,5.51e-09,354;CL:0000219,1.10e-08,386;CL:0002521,1.14e-08,3;CL:0002504,1.23e-08,3;CL:1000279,1.23e-08,3;CL:1000280,1.23e-08,3;CL:0002320,1.49e-08,361;CL:0002567,4.45e-08,3;CL:0002570,1.49e-07,8|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:2394!4.80e-11!14|ontology_enrichment_disease_v019=DOID:2394;4.65e-10;14|ontology_enrichment_disease_v019_2=DOID:2394,6.71e-10,14|ontology_enrichment_uberon=UBERON:0002384!2.78e-09!375;UBERON:0001013!3.45e-08!14;UBERON:0000914!4.27e-08!83;UBERON:0002329!4.27e-08!83;UBERON:0003077!4.27e-08!83;UBERON:0003059!4.27e-08!83;UBERON:0007282!4.27e-08!83;UBERON:0009618!4.27e-08!83;UBERON:0007285!4.27e-08!83;UBERON:0005256!1.86e-07!143;UBERON:0002100!3.22e-07!216;UBERON:0004290!6.85e-07!70|ontology_enrichment_uberon_v019=UBERON:0002072;1.40e-12;5!UBERON:0003688;2.41e-11;6!UBERON:0002358;2.41e-11;6!UBERON:0003684;2.41e-11;6!UBERON:0001178;2.41e-11;6!UBERON:0001013;2.77e-10;14!UBERON:0002190;1.45e-08;3!UBERON:0004457;2.13e-07;9!UBERON:0000042;2.13e-07;9|ontology_enrichment_uberon_v019_2=UBERON:0002072,1.11e-12,5;UBERON:0003688,2.66e-11,6;UBERON:0002358,2.66e-11,6;UBERON:0003684,2.66e-11,6;UBERON:0001178,2.66e-11,6;UBERON:0001013,2.29e-10,14;UBERON:0002190,1.14e-08,3;UBERON:0002384,5.69e-08,371;UBERON:0002100,4.95e-07,199;UBERON:0005256,5.54e-07,122|phase1_expression=10.5373459976923,5.78071414505655,7.89344662937438,7.00513088471913,17.8784437770915,0.872338524100369,22.796989035148,5.05375898741465,1.82829939739887,0,0,0,0,0.866364470720326,0.331397375727916,0,0,0,0,0,0,0,0,0,0,0,0,0,0.786728553697808,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21079900526674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.534880391567015,0.144824403882799,2.43806866313962,0.670700859703636,0,0,0,0.144846518960824,0,0,0,0,0,0.130979075497713,0,0,0,0,0.132957960518865,0,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286836620748814,0.709336764396714,0,0,0,1.55605517699883,0.134710672069688,0,0,0,0,5.93104145977609,0,2.69007624993242,0,0.161872944368132,0.421352420106746,0,0.122834317311768,0,9.50402285825643,6.18167323196392,0,10.7792721272436,0.168336113954066,0.125118519871964,0.277064115484183,0,0.612975591598039,2.25357088359895,0,0.538168907066586,0.213557388818567,0.211931901159562,0.900273288253207,0.206105058476878,0.515281080091258,0.37223371266318,0,0,0,0.184099797284599,0.969876340912871,0.355009592516614,0,0,0.193260853163297,0.272746120590835,0,0,0,0,0,0,0,0,0.643240938192885,2.76269842704961,0,3.60939740834793,0,0,0,0,0,0,0,0,0,0,0,0.8231480226628,4.41026134156626,0,1.96565443335525,3.54473944008842,0.441463099414651,0,0,0.219500570817251,0,0,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0.148631162288728,0,0,0,0,0,0,0,0,0,0,0.12624243342638,0.063497894292169,2.67391897890794,3.51652341630141,1.71072446022705,0,0.901029173531752,0.285826432630578,0,0,0,4.26596662000667,10.7296933755565,0,14.0947201789981,5.2003718455683,0,0,0,0.857867961948885,5.96883765930587,0.823240336780769,0,0,0.791951872933429,0,0,0,1.2162378064119,0,0,0,0,0,0.434343920002738,0,0,0,1.57624608161542,1.07813787429759,0.256686072559497,0.254094624222463,0,0,0,0,0,0,0,0.24538298343828,0.500170521059677,0.271265023699736,0.623912584592421,0,0,0,0,4.5481500811197,1.03473071292505,0,0,1.91143951829782,0.195801157462741,0,0.206768026122887,0,0.213455115606889,0.303127571446259,0,0,4.71404834855676,0.153461973288062,2.24528075546459,4.22859192543813,0,2.2519548960105,0,1.3878872442239,2.66342587969691,0.9033987161519,3.63478100428535,2.09178681227927,0,0,0,2.98517565227978,7.82992022428883,21.5044040533456,0,0,0,0,0,0,0,0,0,0,2.00675909541941,0,0,0,0,0,0,0,0.325378394664303,0.206082023295445,0.0915694648183434,0,0,0,0,0.096670718292122,0.308097234229289,0.307007349452259,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=10417 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11253 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=10bp_to_ENST00000509697_5end | |||
|coexpression_cluster_id=C574 | |||
|description=CAGE_peak_5_at_SPON2_5end | |||
|id=chr4:1164817..1164847,- | |||
|ontology_enrichment_celltype=CL:0000723!1.01e-11!436;CL:0000048!1.15e-11!430;CL:0000136!2.62e-11!15;CL:0000034!7.84e-11!444;CL:0000057!1.41e-10!75;CL:0000055!1.49e-10!180;CL:0002320!2.70e-09!365;CL:0002334!4.29e-08!12;CL:0000134!7.35e-08!358;CL:0000325!1.31e-07!39;CL:0000219!6.68e-07!390 | |||
|ontology_enrichment_celltype_v019=CL:0000136;2.54e-12;13!CL:0002334;3.43e-12;12!CL:0002615;2.99e-09;3!CL:0002622;6.70e-09;3!CL:0002504;1.07e-08;3!CL:1000279;1.07e-08;3!CL:1000280;1.07e-08;3!CL:0002521;1.45e-08;3!CL:0002567;5.74e-08;3!CL:0002570;1.60e-07;8!CL:0000134;1.74e-07;55!CL:0000723;4.09e-07;61 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,4.38e-16,15;CL:0000048,1.19e-12,427;CL:0000723,3.03e-12,433;CL:0002334,4.06e-12,12;CL:0000034,1.01e-11,441;CL:0002615,3.00e-09,3;CL:0002622,5.24e-09,3;CL:0000134,5.51e-09,354;CL:0000219,1.10e-08,386;CL:0002521,1.14e-08,3;CL:0002504,1.23e-08,3;CL:1000279,1.23e-08,3;CL:1000280,1.23e-08,3;CL:0002320,1.49e-08,361;CL:0002567,4.45e-08,3;CL:0002570,1.49e-07,8 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!4.80e-11!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;4.65e-10;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,6.71e-10,14 | |||
|ontology_enrichment_uberon=UBERON:0002384!2.78e-09!375;UBERON:0001013!3.45e-08!14;UBERON:0000914!4.27e-08!83;UBERON:0002329!4.27e-08!83;UBERON:0003077!4.27e-08!83;UBERON:0003059!4.27e-08!83;UBERON:0007282!4.27e-08!83;UBERON:0009618!4.27e-08!83;UBERON:0007285!4.27e-08!83;UBERON:0005256!1.86e-07!143;UBERON:0002100!3.22e-07!216;UBERON:0004290!6.85e-07!70 | |||
|ontology_enrichment_uberon_v019=UBERON:0002072;1.40e-12;5!UBERON:0003688;2.41e-11;6!UBERON:0002358;2.41e-11;6!UBERON:0003684;2.41e-11;6!UBERON:0001178;2.41e-11;6!UBERON:0001013;2.77e-10;14!UBERON:0002190;1.45e-08;3!UBERON:0004457;2.13e-07;9!UBERON:0000042;2.13e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002072,1.11e-12,5;UBERON:0003688,2.66e-11,6;UBERON:0002358,2.66e-11,6;UBERON:0003684,2.66e-11,6;UBERON:0001178,2.66e-11,6;UBERON:0001013,2.29e-10,14;UBERON:0002190,1.14e-08,3;UBERON:0002384,5.69e-08,371;UBERON:0002100,4.95e-07,199;UBERON:0005256,5.54e-07,122 | |||
|phase1_expression=10.5373459976923,5.78071414505655,7.89344662937438,7.00513088471913,17.8784437770915,0.872338524100369,22.796989035148,5.05375898741465,1.82829939739887,0,0,0,0,0.866364470720326,0.331397375727916,0,0,0,0,0,0,0,0,0,0,0,0,0,0.786728553697808,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21079900526674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.534880391567015,0.144824403882799,2.43806866313962,0.670700859703636,0,0,0,0.144846518960824,0,0,0,0,0,0.130979075497713,0,0,0,0,0.132957960518865,0,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286836620748814,0.709336764396714,0,0,0,1.55605517699883,0.134710672069688,0,0,0,0,5.93104145977609,0,2.69007624993242,0,0.161872944368132,0.421352420106746,0,0.122834317311768,0,9.50402285825643,6.18167323196392,0,10.7792721272436,0.168336113954066,0.125118519871964,0.277064115484183,0,0.612975591598039,2.25357088359895,0,0.538168907066586,0.213557388818567,0.211931901159562,0.900273288253207,0.206105058476878,0.515281080091258,0.37223371266318,0,0,0,0.184099797284599,0.969876340912871,0.355009592516614,0,0,0.193260853163297,0.272746120590835,0,0,0,0,0,0,0,0,0.643240938192885,2.76269842704961,0,3.60939740834793,0,0,0,0,0,0,0,0,0,0,0,0.8231480226628,4.41026134156626,0,1.96565443335525,3.54473944008842,0.441463099414651,0,0,0.219500570817251,0,0,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0.148631162288728,0,0,0,0,0,0,0,0,0,0,0.12624243342638,0.063497894292169,2.67391897890794,3.51652341630141,1.71072446022705,0,0.901029173531752,0.285826432630578,0,0,0,4.26596662000667,10.7296933755565,0,14.0947201789981,5.2003718455683,0,0,0,0.857867961948885,5.96883765930587,0.823240336780769,0,0,0.791951872933429,0,0,0,1.2162378064119,0,0,0,0,0,0.434343920002738,0,0,0,1.57624608161542,1.07813787429759,0.256686072559497,0.254094624222463,0,0,0,0,0,0,0,0.24538298343828,0.500170521059677,0.271265023699736,0.623912584592421,0,0,0,0,4.5481500811197,1.03473071292505,0,0,1.91143951829782,0.195801157462741,0,0.206768026122887,0,0.213455115606889,0.303127571446259,0,0,4.71404834855676,0.153461973288062,2.24528075546459,4.22859192543813,0,2.2519548960105,0,1.3878872442239,2.66342587969691,0.9033987161519,3.63478100428535,2.09178681227927,0,0,0,2.98517565227978,7.82992022428883,21.5044040533456,0,0,0,0,0,0,0,0,0,0,2.00675909541941,0,0,0,0,0,0,0,0.325378394664303,0.206082023295445,0.0915694648183434,0,0,0,0,0.096670718292122,0.308097234229289,0.307007349452259,0.413509717453592,1.71872391789238,1.45016693914229,0.340906509664404,0.623224249527161,0,0,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0,3.62197368455267,1.27948895655667,0.855877976067841,0,0,4.13706652441624,5.76527762445715,3.29874726567922,0,0,0,2.92580243453754,0,0,1.63799893689583,27.0084375031591,0,0,0,0,2.89387767133344,1.31178950409327,0,0.30982349809975,0,0.717056761020258,0.392996164052485,0,0.354761064070598,0,0,0,1.04980416073495,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439524537815682,0,0,0,0.23874448473769,0.296964680832639,0.307160702099232,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0.197286811273867,0,0,0,0,0,0,0,0.724999575434793,0,0,0,0,0,0.173624994933292,0,0,0,0.110579259931225,0.295547618953547,0,0,0,1.61595542857974,0,0,0,0,0.31900115973192,8.79336896657878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.619202951523374,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,1.57254001417827,0,0,0,0,0.193978032976839,0,0,0,0,0,0,0,1.49417096317547,0,0,0,0.171594997861965,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223171457441873,0.0671834724867263,0,0,0,0.164831716762333,0,0,0,0,0,0,0.137539436597234,0,0,0,0,0,0.157611414598396,0,0,0,0,0,0,0,1.08599920350743,1.72844298240254,0,0,0,0.170388021785422,0,0.58620893471233,0,0,0,0,0,0.213574825135389,0.157204305099666,0,0,0.197611631897944,0,0,0,0.2506898940227,0.306345576763462,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0.447764408660622,1.63599316893057,1.66441758450784,0.189403005275089,0.251567901752575,0.889811221596536,0.457680136793847,1.66354016139563,0,0,0.318593534327405,2.24901556081802,0.931577741257556,2.07353103920428,0.53168342911599,8.34792098898774,1.35231848097497,1.14241563650639,0.813741466409323,1.09109195521536,0.322231671127465,2.78420255927096,7.16572599657509,0,2.40376993627955,2.02049693259551,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.4311550244172,0,0,0,0,0.504143392443436,0,0,0,0,0,0,0,0,0,0,0.82731361184183,0,0,0.785720083444267,0,0,0,0,0,0,0,0,0.992422356778588,0,0,0,0,0,0,0.443511850813194,0,0.342976018874837,0,0,0,0,0.156986185701028,0,0,0,0.215927591218621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205325613712494,1.1598144313382,0,0,0,0,0,0,0,0.154348316215889,0.437119121007915,0,0,0,0,0,0,0,0.187967835959707,0,0,0,0,0,0,0,0,0,0,0,0,0,0.462175628631418,0.432626562123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| |||
|short_description=p5@SPON2 | |||
}} |
Revision as of 02:10, 13 September 2013
Short description: | p5@SPON2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_SPON2_5end |
Coexpression cluster: | C574_Mesenchymal_Fibroblast_Smooth_Prostate_Adipocyte_Hair_mesenchymal |
Association with transcript: | 10bp_to_ENST00000509697_5end |
EntrezGene: | SPON2 |
HGNC: | 11253 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 4.38e-16 | 15 |
multi fate stem cell | 1.19e-12 | 427 |
somatic stem cell | 3.03e-12 | 433 |
preadipocyte | 4.06e-12 | 12 |
stem cell | 1.01e-11 | 441 |
adipocyte of omentum tissue | 3.00e-09 | 3 |
prostate stromal cell | 5.24e-09 | 3 |
mesenchymal cell | 5.51e-09 | 354 |
motile cell | 1.10e-08 | 386 |
subcutaneous fat cell | 1.14e-08 | 3 |
enteric smooth muscle cell | 1.23e-08 | 3 |
smooth muscle cell of large intestine | 1.23e-08 | 3 |
smooth muscle cell of colon | 1.23e-08 | 3 |
connective tissue cell | 1.49e-08 | 361 |
light melanocyte | 4.45e-08 | 3 |
mesenchymal stem cell of adipose | 1.49e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
hypodermis | 1.11e-12 | 5 |
omentum | 2.66e-11 | 6 |
peritoneum | 2.66e-11 | 6 |
abdominal cavity | 2.66e-11 | 6 |
visceral peritoneum | 2.66e-11 | 6 |
adipose tissue | 2.29e-10 | 14 |
subcutaneous adipose tissue | 1.14e-08 | 3 |
connective tissue | 5.69e-08 | 371 |
trunk | 4.95e-07 | 199 |
trunk mesenchyme | 5.54e-07 | 122 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 6.71e-10 | 14 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.