FFCP PHASE1:Mm9::chr14:56778427..56778434,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=14944|HGNC=|MCL_coexpression_id=258|UniProt=P13366,Q4KL28|association_with_transcript=-11bp_to_ENSMUST00000015578,NM_010375,uc007ubq.1_5end|description=CAGE_peak_1_at_Gzmg_5end|id=chr14:56778427..56778434,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005631!2.56e-25!3;UBERON:0000478!2.56e-25!3;UBERON:0000158!2.56e-25!3;UBERON:0005795!2.34e-19!4;UBERON:0000995!2.34e-19!4;UBERON:0001987!1.55e-17!2;UBERON:0003124!1.55e-17!2;UBERON:0004340!1.55e-17!2;UBERON:0003975!1.27e-15!5;UBERON:0003134!5.42e-10!8;UBERON:0006834!9.82e-10!1;UBERON:0000305!1.73e-09!1;UBERON:0004175!6.06e-09!9;UBERON:0000474!6.06e-09!9;UBERON:0003100!2.06e-07!11|ontology_enrichment_uberon_v019_2=UBERON:0005631,3.27e-44,3;UBERON:0000478,3.27e-44,3;UBERON:0000158,3.27e-44,3;UBERON:0005795,9.53e-34,4;UBERON:0000995,9.53e-34,4;UBERON:0001987,3.41e-30,2;UBERON:0003124,3.41e-30,2;UBERON:0004340,3.41e-30,2;UBERON:0003975,3.42e-27,5;UBERON:0003134,2.48e-17,8;UBERON:0006834,3.44e-16,1;UBERON:0000305,9.51e-16,1;UBERON:0004175,1.69e-15,9;UBERON:0000474,1.69e-15,9;UBERON:0003100,7.94e-13,11;UBERON:0007023,1.36e-07,51|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.71914464507811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.11560453330835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.4229455216103,0,0,0,0,0,1279.19548065529,44.9083990231299,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147689527174577,0,0,0,0.0974578807397524,0,0,0,0,0,0,0,2162.10211719762,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0574354689556133,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p1@Gzmg}} | ||
|EntrezGene=14944 | |||
|HGNC= | |||
|MCL_coexpression_id=258 | |||
|UniProt=P13366,Q4KL28 | |||
|association_with_transcript=-11bp_to_ENSMUST00000015578,NM_010375,uc007ubq.1_5end | |||
|description=CAGE_peak_1_at_Gzmg_5end | |||
|id=chr14:56778427..56778434,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!2.56e-25!3;UBERON:0000478!2.56e-25!3;UBERON:0000158!2.56e-25!3;UBERON:0005795!2.34e-19!4;UBERON:0000995!2.34e-19!4;UBERON:0001987!1.55e-17!2;UBERON:0003124!1.55e-17!2;UBERON:0004340!1.55e-17!2;UBERON:0003975!1.27e-15!5;UBERON:0003134!5.42e-10!8;UBERON:0006834!9.82e-10!1;UBERON:0000305!1.73e-09!1;UBERON:0004175!6.06e-09!9;UBERON:0000474!6.06e-09!9;UBERON:0003100!2.06e-07!11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,3.27e-44,3;UBERON:0000478,3.27e-44,3;UBERON:0000158,3.27e-44,3;UBERON:0005795,9.53e-34,4;UBERON:0000995,9.53e-34,4;UBERON:0001987,3.41e-30,2;UBERON:0003124,3.41e-30,2;UBERON:0004340,3.41e-30,2;UBERON:0003975,3.42e-27,5;UBERON:0003134,2.48e-17,8;UBERON:0006834,3.44e-16,1;UBERON:0000305,9.51e-16,1;UBERON:0004175,1.69e-15,9;UBERON:0000474,1.69e-15,9;UBERON:0003100,7.94e-13,11;UBERON:0007023,1.36e-07,51 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.71914464507811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.11560453330835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.4229455216103,0,0,0,0,0,1279.19548065529,44.9083990231299,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147689527174577,0,0,0,0.0974578807397524,0,0,0,0,0,0,0,2162.10211719762,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0574354689556133,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p1@Gzmg | |||
}} |
Revision as of 02:35, 13 September 2013
Short description: | p1@Gzmg |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Gzmg_5end |
Coexpression cluster: | MCL_coexpression_mm9:258 |
Association with transcript: | -11bp_to_ENSMUST00000015578, NM_010375, uc007ubq.1_5end |
EntrezGene: | Gzmg |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 3.27e-44 | 3 |
extraembryonic structure | 3.27e-44 | 3 |
membranous layer | 3.27e-44 | 3 |
embryonic uterus | 9.53e-34 | 4 |
uterus | 9.53e-34 | 4 |
placenta | 3.41e-30 | 2 |
chorion | 3.41e-30 | 2 |
allantois | 3.41e-30 | 2 |
internal female genitalia | 3.42e-27 | 5 |
female reproductive organ | 2.48e-17 | 8 |
uterus or analog | 3.44e-16 | 1 |
amnion | 9.51e-16 | 1 |
internal genitalia | 1.69e-15 | 9 |
female reproductive system | 1.69e-15 | 9 |
female organism | 7.94e-13 | 11 |
adult organism | 1.36e-07 | 51 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.