FFCP PHASE1:Hg19::chr4:143767679..143767699,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=8821|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=6075|TSSclassifier=S|UniProt=O15327|association_with_transcript=-75bp_to_NM_001101669,NM_003866,uc003iiw.3,uc003iix.3_5end|coexpression_cluster_id=C2778|description=CAGE_peak_7_at_INPP4B_5end|id=chr4:143767679..143767699,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0006603;2.41e-07;65|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!2.67e-41!115;UBERON:0001049!1.82e-22!57;UBERON:0005068!1.82e-22!57;UBERON:0006241!1.82e-22!57;UBERON:0007135!1.82e-22!57;UBERON:0003080!3.09e-18!42;UBERON:0002780!9.26e-18!41;UBERON:0001890!9.26e-18!41;UBERON:0006240!9.26e-18!41;UBERON:0002616!1.66e-17!59;UBERON:0002020!1.14e-16!34;UBERON:0003528!1.14e-16!34;UBERON:0000955!2.56e-16!69;UBERON:0006238!2.56e-16!69;UBERON:0001893!3.39e-16!34;UBERON:0005743!4.34e-16!86;UBERON:0001017!6.25e-16!82;UBERON:0002791!9.72e-16!33;UBERON:0001869!9.82e-16!32;UBERON:0003075!1.57e-15!86;UBERON:0007284!1.57e-15!86;UBERON:0002346!7.81e-14!90;UBERON:0000956!2.15e-13!25;UBERON:0000203!2.15e-13!25;UBERON:0002619!2.88e-13!22;UBERON:0000073!1.90e-12!94;UBERON:0001016!1.90e-12!94;UBERON:0001950!7.52e-12!20;UBERON:0003056!3.79e-11!61;UBERON:0000153!4.78e-10!129;UBERON:0007811!4.78e-10!129;UBERON:0000062!6.57e-10!511;UBERON:0000033!9.65e-09!123|ontology_enrichment_uberon_v019=UBERON:0002619;9.51e-16;22!UBERON:0001869;1.65e-14;32!UBERON:0003528;2.31e-14;34!UBERON:0002020;2.31e-14;34!UBERON:0002791;9.87e-14;32!UBERON:0001950;1.72e-13;20!UBERON:0000956;2.84e-13;25!UBERON:0000203;2.84e-13;25!UBERON:0001893;8.95e-13;34!UBERON:0002780;3.71e-11;41!UBERON:0001890;3.71e-11;41!UBERON:0000073;1.59e-09;53!UBERON:0002616;1.59e-09;53!UBERON:0007023;4.68e-09;114!UBERON:0001017;1.49e-07;75!UBERON:0000955;1.70e-07;68!UBERON:0000349;2.38e-07;5!UBERON:0000200;4.23e-07;6|ontology_enrichment_uberon_v019_2=UBERON:0007023,4.65e-36,114;UBERON:0001049,9.65e-19,56;UBERON:0005068,9.65e-19,56;UBERON:0006241,9.65e-19,56;UBERON:0007135,9.65e-19,56;UBERON:0000073,1.51e-17,53;UBERON:0002616,1.51e-17,53;UBERON:0003528,4.75e-17,34;UBERON:0002020,4.75e-17,34;UBERON:0001869,1.16e-16,32;UBERON:0002619,5.45e-16,22;UBERON:0002780,1.36e-15,41;UBERON:0001890,1.36e-15,41;UBERON:0003080,1.36e-15,41;UBERON:0006240,1.36e-15,41;UBERON:0000955,2.06e-15,68;UBERON:0006238,2.06e-15,68;UBERON:0001893,2.77e-15,34;UBERON:0002791,3.18e-15,32;UBERON:0001017,5.87e-15,81;UBERON:0001950,1.03e-13,20;UBERON:0000956,1.76e-13,25;UBERON:0000203,1.76e-13,25;UBERON:0001016,2.45e-12,89;UBERON:0011216,8.23e-11,223;UBERON:0003075,1.62e-10,82;UBERON:0007284,1.62e-10,82;UBERON:0002346,1.39e-09,86;UBERON:0003056,4.42e-08,61;UBERON:0000349,2.12e-07,5;UBERON:0000200,3.54e-07,6;UBERON:0010371,5.49e-07,104;UBERON:0000025,6.98e-07,192|phase1_expression=0,0.214100523890983,0.422863212287913,0,0.893922188854576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0.572471974262113,0.273748850145768,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0,8.22081230137572,0,0,0.217010870715852,0.223915474239924,0.647787332037959,0,0,0,0,0,0,0,0,0.256160706529101,0,0,0,0,0,0,0,0.306083892370903,0.320929027076094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209658645508376,0.112328631146495,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.2171328579026,6.72610275577843,4.21414535640123,1.180258620683,0.786021525498329,0.822405995998037,0.167186495390678,0.977766799900771,0,0,0,0,0,0,0,0.130059347559878,0.493313713811028,1.93445012450094,2.02862160014537,4.00373720537563,2.94294910898684,0,0.113309342697566,1.53288197440768,0.34362744548263,0.506039384039006,1.27426165729639,0.651083453856419,0,0.903450714466637,0.639933055772092,2.49861453104692,1.4206635122641,0.821127996921047,0,0,0,0,0,0,0,0,0.289693037921647,0,0,0.0945348171640679,0.443458794925128,0.175669571386252,1.24430121722827,0,0,0,0,0.132957960518865,0,0.571994910780128,0,0,0,0,0.56530794192401,0,0,0,0,0,0,0,0.760272105718513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.397227542439656,2.29469296599051,0.354668382198357,1.12135520028461,0,0.24666754841716,2.48968828319813,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0.204154171254893,0,0,0,0.494533858557114,0,0,0,0,0,0,0,0.150238058906597,0,0,1.49490172172997,1.05965950579781,0.900273288253207,1.44273540933814,4.3798891807757,0.37223371266318,0.506328996723799,0.487185025805993,1.26216887122057,1.47279837827679,0,0.355009592516614,0.302256294682921,0.847802961552438,0.386521706326594,0.545492241181669,0.286804595389004,0,0,0,0,0,0,0,0.643240938192885,0,0,0,0,0,0.723033089650446,0,0,0.474541238222193,0,0.196221465125346,0,0,0,0,0,0,0,1.18157981336281,0,0,0,0.109750285408626,0,0,0,0,0,0,0,0,0,0,0,1.58040879591855,1.71697232418975,0,0,0,0,0.839910640994298,0.283550194484773,0.0895585227028483,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.39344304926383,3.12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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=8821 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6075 | |||
|TSSclassifier=S | |||
|UniProt=O15327 | |||
|association_with_transcript=-75bp_to_NM_001101669,NM_003866,uc003iiw.3,uc003iix.3_5end | |||
|coexpression_cluster_id=C2778 | |||
|description=CAGE_peak_7_at_INPP4B_5end | |||
|id=chr4:143767679..143767699,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006603;2.41e-07;65 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.67e-41!115;UBERON:0001049!1.82e-22!57;UBERON:0005068!1.82e-22!57;UBERON:0006241!1.82e-22!57;UBERON:0007135!1.82e-22!57;UBERON:0003080!3.09e-18!42;UBERON:0002780!9.26e-18!41;UBERON:0001890!9.26e-18!41;UBERON:0006240!9.26e-18!41;UBERON:0002616!1.66e-17!59;UBERON:0002020!1.14e-16!34;UBERON:0003528!1.14e-16!34;UBERON:0000955!2.56e-16!69;UBERON:0006238!2.56e-16!69;UBERON:0001893!3.39e-16!34;UBERON:0005743!4.34e-16!86;UBERON:0001017!6.25e-16!82;UBERON:0002791!9.72e-16!33;UBERON:0001869!9.82e-16!32;UBERON:0003075!1.57e-15!86;UBERON:0007284!1.57e-15!86;UBERON:0002346!7.81e-14!90;UBERON:0000956!2.15e-13!25;UBERON:0000203!2.15e-13!25;UBERON:0002619!2.88e-13!22;UBERON:0000073!1.90e-12!94;UBERON:0001016!1.90e-12!94;UBERON:0001950!7.52e-12!20;UBERON:0003056!3.79e-11!61;UBERON:0000153!4.78e-10!129;UBERON:0007811!4.78e-10!129;UBERON:0000062!6.57e-10!511;UBERON:0000033!9.65e-09!123 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;9.51e-16;22!UBERON:0001869;1.65e-14;32!UBERON:0003528;2.31e-14;34!UBERON:0002020;2.31e-14;34!UBERON:0002791;9.87e-14;32!UBERON:0001950;1.72e-13;20!UBERON:0000956;2.84e-13;25!UBERON:0000203;2.84e-13;25!UBERON:0001893;8.95e-13;34!UBERON:0002780;3.71e-11;41!UBERON:0001890;3.71e-11;41!UBERON:0000073;1.59e-09;53!UBERON:0002616;1.59e-09;53!UBERON:0007023;4.68e-09;114!UBERON:0001017;1.49e-07;75!UBERON:0000955;1.70e-07;68!UBERON:0000349;2.38e-07;5!UBERON:0000200;4.23e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,4.65e-36,114;UBERON:0001049,9.65e-19,56;UBERON:0005068,9.65e-19,56;UBERON:0006241,9.65e-19,56;UBERON:0007135,9.65e-19,56;UBERON:0000073,1.51e-17,53;UBERON:0002616,1.51e-17,53;UBERON:0003528,4.75e-17,34;UBERON:0002020,4.75e-17,34;UBERON:0001869,1.16e-16,32;UBERON:0002619,5.45e-16,22;UBERON:0002780,1.36e-15,41;UBERON:0001890,1.36e-15,41;UBERON:0003080,1.36e-15,41;UBERON:0006240,1.36e-15,41;UBERON:0000955,2.06e-15,68;UBERON:0006238,2.06e-15,68;UBERON:0001893,2.77e-15,34;UBERON:0002791,3.18e-15,32;UBERON:0001017,5.87e-15,81;UBERON:0001950,1.03e-13,20;UBERON:0000956,1.76e-13,25;UBERON:0000203,1.76e-13,25;UBERON:0001016,2.45e-12,89;UBERON:0011216,8.23e-11,223;UBERON:0003075,1.62e-10,82;UBERON:0007284,1.62e-10,82;UBERON:0002346,1.39e-09,86;UBERON:0003056,4.42e-08,61;UBERON:0000349,2.12e-07,5;UBERON:0000200,3.54e-07,6;UBERON:0010371,5.49e-07,104;UBERON:0000025,6.98e-07,192 | |||
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| |||
|short_description=p7@INPP4B | |||
}} |
Revision as of 02:35, 13 September 2013
Short description: | p7@INPP4B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_INPP4B_5end |
Coexpression cluster: | C2778_heart_Wilms_acute_CD34_Pancreatic_occipital_uterus |
Association with transcript: | -75bp_to_NM_001101669, NM_003866, uc003iiw.3, uc003iix.3_5end |
EntrezGene: | INPP4B |
HGNC: | 6075 |
UniProt: | O15327 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 4.65e-36 | 114 |
neural tube | 9.65e-19 | 56 |
neural rod | 9.65e-19 | 56 |
future spinal cord | 9.65e-19 | 56 |
neural keel | 9.65e-19 | 56 |
regional part of nervous system | 1.51e-17 | 53 |
regional part of brain | 1.51e-17 | 53 |
brain grey matter | 4.75e-17 | 34 |
gray matter | 4.75e-17 | 34 |
cerebral hemisphere | 1.16e-16 | 32 |
regional part of cerebral cortex | 5.45e-16 | 22 |
regional part of forebrain | 1.36e-15 | 41 |
forebrain | 1.36e-15 | 41 |
anterior neural tube | 1.36e-15 | 41 |
future forebrain | 1.36e-15 | 41 |
brain | 2.06e-15 | 68 |
future brain | 2.06e-15 | 68 |
telencephalon | 2.77e-15 | 34 |
regional part of telencephalon | 3.18e-15 | 32 |
central nervous system | 5.87e-15 | 81 |
neocortex | 1.03e-13 | 20 |
cerebral cortex | 1.76e-13 | 25 |
pallium | 1.76e-13 | 25 |
nervous system | 2.45e-12 | 89 |
organ system subdivision | 8.23e-11 | 223 |
neural plate | 1.62e-10 | 82 |
presumptive neural plate | 1.62e-10 | 82 |
neurectoderm | 1.39e-09 | 86 |
pre-chordal neural plate | 4.42e-08 | 61 |
limbic system | 2.12e-07 | 5 |
gyrus | 3.54e-07 | 6 |
ecto-epithelium | 5.49e-07 | 104 |
tube | 6.98e-07 | 192 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.