FFCP PHASE1:Mm9::chr14:63630602..63630612,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=654458|HGNC=|MCL_coexpression_id=9|UniProt=Q30KM9|association_with_transcript=0bp_to_ENSMUST00000100491,NM_001039121,uc007uhc.1_5end|description=CAGE_peak_4_at_Defb43_5end|id=chr14:63630602..63630612,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001301!3.91e-24!3;UBERON:0006555!3.91e-24!3;UBERON:0005103!3.91e-24!3;UBERON:0000083!3.91e-24!3;UBERON:0009201!3.91e-24!3;UBERON:0004819!3.91e-24!3;UBERON:0006553!3.91e-24!3;UBERON:0003074!3.91e-24!3;UBERON:0003060!3.91e-24!3;UBERON:0000080!2.13e-18!4;UBERON:0005904!2.13e-18!4;UBERON:0006947!2.13e-18!4;UBERON:0002120!2.13e-18!4;UBERON:0004054!2.13e-18!4;UBERON:0004875!2.13e-18!4;UBERON:0004876!2.13e-18!4;UBERON:0005721!2.13e-18!4;UBERON:0005754!2.13e-18!4;UBERON:0007297!2.13e-18!4;UBERON:0000058!1.24e-12!6;UBERON:0003135!2.69e-11!15;UBERON:0003101!1.22e-10!16;UBERON:0000079!1.22e-10!16;UBERON:0001343!7.56e-10!2;UBERON:0004910!7.56e-10!2;UBERON:0004909!7.56e-10!2;UBERON:0005154!7.56e-10!2;UBERON:0005295!7.56e-10!2;UBERON:0005297!7.56e-10!2;UBERON:0005294!7.56e-10!2;UBERON:0010141!7.56e-10!2;UBERON:0005891!7.56e-10!2;UBERON:0004175!9.19e-09!9;UBERON:0003887!5.53e-08!10;UBERON:0003133!2.41e-07!24;UBERON:0004871!5.46e-07!3;UBERON:0005156!7.82e-07!26;UBERON:0000990!7.82e-07!26|ontology_enrichment_uberon_v019_2=UBERON:0001301,8.02e-16,3;UBERON:0006555,8.02e-16,3;UBERON:0005103,8.02e-16,3;UBERON:0000083,8.02e-16,3;UBERON:0009201,8.02e-16,3;UBERON:0004819,8.02e-16,3;UBERON:0006553,8.02e-16,3;UBERON:0003074,8.02e-16,3;UBERON:0003060,8.02e-16,3;UBERON:0003135,8.25e-13,15;UBERON:0000080,3.12e-12,4;UBERON:0005904,3.12e-12,4;UBERON:0006947,3.12e-12,4;UBERON:0002120,3.12e-12,4;UBERON:0004054,3.12e-12,4;UBERON:0004875,3.12e-12,4;UBERON:0004876,3.12e-12,4;UBERON:0005721,3.12e-12,4;UBERON:0005754,3.12e-12,4;UBERON:0007297,3.12e-12,4;UBERON:0003101,4.31e-12,16;UBERON:0000079,4.31e-12,16;UBERON:0003133,1.75e-08,24;UBERON:0005156,6.33e-08,26;UBERON:0000990,6.33e-08,26;UBERON:0000058,1.41e-07,7|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.45673551887624,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.248813941220186,24.2613848096328,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44015003128933,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p4@Defb43}} | ||
|EntrezGene=654458 | |||
|HGNC= | |||
|MCL_coexpression_id=9 | |||
|UniProt=Q30KM9 | |||
|association_with_transcript=0bp_to_ENSMUST00000100491,NM_001039121,uc007uhc.1_5end | |||
|description=CAGE_peak_4_at_Defb43_5end | |||
|id=chr14:63630602..63630612,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001301!3.91e-24!3;UBERON:0006555!3.91e-24!3;UBERON:0005103!3.91e-24!3;UBERON:0000083!3.91e-24!3;UBERON:0009201!3.91e-24!3;UBERON:0004819!3.91e-24!3;UBERON:0006553!3.91e-24!3;UBERON:0003074!3.91e-24!3;UBERON:0003060!3.91e-24!3;UBERON:0000080!2.13e-18!4;UBERON:0005904!2.13e-18!4;UBERON:0006947!2.13e-18!4;UBERON:0002120!2.13e-18!4;UBERON:0004054!2.13e-18!4;UBERON:0004875!2.13e-18!4;UBERON:0004876!2.13e-18!4;UBERON:0005721!2.13e-18!4;UBERON:0005754!2.13e-18!4;UBERON:0007297!2.13e-18!4;UBERON:0000058!1.24e-12!6;UBERON:0003135!2.69e-11!15;UBERON:0003101!1.22e-10!16;UBERON:0000079!1.22e-10!16;UBERON:0001343!7.56e-10!2;UBERON:0004910!7.56e-10!2;UBERON:0004909!7.56e-10!2;UBERON:0005154!7.56e-10!2;UBERON:0005295!7.56e-10!2;UBERON:0005297!7.56e-10!2;UBERON:0005294!7.56e-10!2;UBERON:0010141!7.56e-10!2;UBERON:0005891!7.56e-10!2;UBERON:0004175!9.19e-09!9;UBERON:0003887!5.53e-08!10;UBERON:0003133!2.41e-07!24;UBERON:0004871!5.46e-07!3;UBERON:0005156!7.82e-07!26;UBERON:0000990!7.82e-07!26 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001301,8.02e-16,3;UBERON:0006555,8.02e-16,3;UBERON:0005103,8.02e-16,3;UBERON:0000083,8.02e-16,3;UBERON:0009201,8.02e-16,3;UBERON:0004819,8.02e-16,3;UBERON:0006553,8.02e-16,3;UBERON:0003074,8.02e-16,3;UBERON:0003060,8.02e-16,3;UBERON:0003135,8.25e-13,15;UBERON:0000080,3.12e-12,4;UBERON:0005904,3.12e-12,4;UBERON:0006947,3.12e-12,4;UBERON:0002120,3.12e-12,4;UBERON:0004054,3.12e-12,4;UBERON:0004875,3.12e-12,4;UBERON:0004876,3.12e-12,4;UBERON:0005721,3.12e-12,4;UBERON:0005754,3.12e-12,4;UBERON:0007297,3.12e-12,4;UBERON:0003101,4.31e-12,16;UBERON:0000079,4.31e-12,16;UBERON:0003133,1.75e-08,24;UBERON:0005156,6.33e-08,26;UBERON:0000990,6.33e-08,26;UBERON:0000058,1.41e-07,7 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.45673551887624,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.248813941220186,24.2613848096328,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44015003128933,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p4@Defb43 | |||
}} |
Revision as of 02:43, 13 September 2013
Short description: | p4@Defb43 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Defb43_5end |
Coexpression cluster: | MCL_coexpression_mm9:9 |
Association with transcript: | 0bp_to_ENSMUST00000100491, NM_001039121, uc007uhc.1_5end |
EntrezGene: | Defb43 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epididymis | 8.02e-16 | 3 |
excretory tube | 8.02e-16 | 3 |
mesonephric epithelium | 8.02e-16 | 3 |
mesonephric tubule | 8.02e-16 | 3 |
nephric duct | 8.02e-16 | 3 |
kidney epithelium | 8.02e-16 | 3 |
renal duct | 8.02e-16 | 3 |
mesonephric duct | 8.02e-16 | 3 |
pronephric duct | 8.02e-16 | 3 |
male reproductive organ | 8.25e-13 | 15 |
mesonephros | 3.12e-12 | 4 |
duct of male reproductive system | 3.12e-12 | 4 |
male genital duct | 3.12e-12 | 4 |
pronephros | 3.12e-12 | 4 |
internal male genitalia | 3.12e-12 | 4 |
nephrogenic cord | 3.12e-12 | 4 |
urogenital ridge | 3.12e-12 | 4 |
pronephric mesoderm | 3.12e-12 | 4 |
rostral part of nephrogenic cord | 3.12e-12 | 4 |
presumptive pronephric mesoderm | 3.12e-12 | 4 |
male organism | 4.31e-12 | 16 |
male reproductive system | 4.31e-12 | 16 |
reproductive organ | 1.75e-08 | 24 |
reproductive structure | 6.33e-08 | 26 |
reproductive system | 6.33e-08 | 26 |
duct | 1.41e-07 | 7 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.