FFCP PHASE1:Hg19::chr4:152147579..152147599,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=152503|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=30418|TSSclassifier=S|UniProt=|association_with_transcript=5bp_to_ENST00000474743_5end|description=CAGE_peak_5_at_SH3D19_5end|id=chr4:152147579..152147599,-|ontology_enrichment_celltype=CL:0000055!1.22e-23!180;CL:0000057!1.24e-18!75;CL:0000680!1.30e-13!57;CL:0000056!1.30e-13!57;CL:0000355!1.30e-13!57;CL:0000183!1.12e-12!59;CL:0000187!1.95e-12!54;CL:0000136!8.85e-10!15;CL:0000393!1.09e-09!60;CL:0000211!1.09e-09!60;CL:0000192!2.75e-09!42;CL:0000514!2.75e-09!42;CL:0000222!1.77e-08!119;CL:0002620!9.23e-07!23|ontology_enrichment_celltype_v019=CL:0000136;1.59e-15;13|ontology_enrichment_celltype_v019_2=CL:0000136,2.42e-17,15;CL:0000057,1.14e-12,76|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000914!8.80e-18!83;UBERON:0002329!8.80e-18!83;UBERON:0003077!8.80e-18!83;UBERON:0003059!8.80e-18!83;UBERON:0007282!8.80e-18!83;UBERON:0009618!8.80e-18!83;UBERON:0007285!8.80e-18!83;UBERON:0000475!5.34e-17!365;UBERON:0002385!1.20e-14!63;UBERON:0001015!1.20e-14!63;UBERON:0000383!1.20e-14!63;UBERON:0004290!3.98e-14!70;UBERON:0001134!4.08e-14!61;UBERON:0002036!4.08e-14!61;UBERON:0003082!4.08e-14!61;UBERON:0000486!1.15e-12!82;UBERON:0000468!1.72e-11!659;UBERON:0002049!1.68e-10!79;UBERON:0007798!1.68e-10!79;UBERON:0005256!2.93e-10!143;UBERON:0000477!3.98e-09!286;UBERON:0000119!7.25e-09!312;UBERON:0004872!7.41e-09!84;UBERON:0000467!8.27e-09!625;UBERON:0000480!1.11e-08!626;UBERON:0002100!1.31e-08!216;UBERON:0000483!1.46e-08!309;UBERON:0000481!2.39e-08!347;UBERON:0004535!4.36e-08!110;UBERON:0000055!1.15e-07!69;UBERON:0000479!1.25e-07!787;UBERON:0001637!2.01e-07!42;UBERON:0003509!2.01e-07!42;UBERON:0004572!2.01e-07!42;UBERON:0000490!2.12e-07!138;UBERON:0001009!2.16e-07!113;UBERON:0004573!2.88e-07!33;UBERON:0004571!2.88e-07!33;UBERON:0004111!3.03e-07!241;UBERON:0001981!3.37e-07!60;UBERON:0007500!3.37e-07!60;UBERON:0004537!3.37e-07!60;UBERON:0006965!3.37e-07!60;UBERON:0001135!8.70e-07!15|ontology_enrichment_uberon_v019=UBERON:0003688;1.68e-10;6!UBERON:0002358;1.68e-10;6!UBERON:0003684;1.68e-10;6!UBERON:0001178;1.68e-10;6!UBERON:0004457;5.06e-09;9!UBERON:0000042;5.06e-09;9!UBERON:0005284;1.39e-08;5|ontology_enrichment_uberon_v019_2=UBERON:0003688,2.73e-10,6;UBERON:0002358,2.73e-10,6;UBERON:0003684,2.73e-10,6;UBERON:0001178,2.73e-10,6;UBERON:0005284,5.61e-09,5|phase1_expression=3.27021082687002,1.07050261945492,4.36958652697511,1.0007329835313,4.02264984984559,2.61701557230111,2.53299878168311,0,0.522371256399677,0,0,0.873765488520689,0.791300934685361,3.34169152992126,1.98838425436749,1.34465029290355,0.602694528023977,0.730310090387373,0.487932798790507,0.123121058076788,0.204000691244253,0,0,0.136874425072884,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.87613732627923,0.670700859703636,0.383587685530591,1.44575660953827,1.00267582127178,0.289693037921647,0.795285947051099,0,0,0,0.175669571386252,0.392937226493138,0.364295288292542,0,0,0,0,0,0,0,1.19257444420023,0.860234595106124,0.347140501607594,0,1.67799774483962,0.825354125820202,0.208994966536811,0,0.71153252537342,0.66944122552934,0,0,0.488124115096339,1.10298924103761,0,0.535798369704479,0.44905874525234,0,0,0,0.549605231791222,0,0,0,1.49091585508596,1.51956613997496,0.397227542439656,1.14734648299525,1.77334191099179,0.560677600142307,0,0,1.55605517699883,0.404132016209064,0.653847612453835,3.93529311876822,1.72852777344,0.468642863667593,0.312160076830321,0,0.448346041655403,1.05691048779388,0.647491777472526,0.561803226808994,3.87892925384297,1.47401180774122,4.44300859055791,3.56400857184616,0.989067717114227,0,0.718618141816238,1.85169725349473,1.12606667884768,2.49357703935765,0.877955241761676,0.612975591598039,0.600952235626387,0.567160915800105,0,0.85422955527427,0.847727604638247,0.600182192168805,1.75189299705346,1.28820270022815,0.37223371266318,0.843881661206331,0.779496041289589,1.00973509697646,1.38074847963449,3.55621325001386,0.710019185033229,0.604512589365842,0.339121184620975,0.386521706326594,0.272746120590835,0,0,0,0,0,0,0,0,0.643240938192885,0,1.85747171212792,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,1.2347220339942,1.47008711385542,0,0,0,0,0,0.343135620597051,0.219500570817251,0,0,0.0925884451585296,0.325808305310325,0,0,0,0.469634776943287,1.01056513432752,0.462985512576611,0.380508304469197,0,0,0,0,0,0,0.503946384596579,0.567100388969546,0,0,0,0,0,0,0.144119953416961,0,0,0,0,0,0.102827492703324,0,0,0.784917590417525,0,1.1734125731352,0.646358578788889,0,0,0.26593811658487,0,0,0,0,6.86294369559108,2.71310802695722,0,0,4.97548728239564,0,1.50719688529793,0,0.799783929456456,0,0,0,0,0,0,2.02693829334611,0.410952645100767,1.07436577943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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=152503 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30418 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=5bp_to_ENST00000474743_5end | |||
|description=CAGE_peak_5_at_SH3D19_5end | |||
|id=chr4:152147579..152147599,- | |||
|ontology_enrichment_celltype=CL:0000055!1.22e-23!180;CL:0000057!1.24e-18!75;CL:0000680!1.30e-13!57;CL:0000056!1.30e-13!57;CL:0000355!1.30e-13!57;CL:0000183!1.12e-12!59;CL:0000187!1.95e-12!54;CL:0000136!8.85e-10!15;CL:0000393!1.09e-09!60;CL:0000211!1.09e-09!60;CL:0000192!2.75e-09!42;CL:0000514!2.75e-09!42;CL:0000222!1.77e-08!119;CL:0002620!9.23e-07!23 | |||
|ontology_enrichment_celltype_v019=CL:0000136;1.59e-15;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,2.42e-17,15;CL:0000057,1.14e-12,76 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!8.80e-18!83;UBERON:0002329!8.80e-18!83;UBERON:0003077!8.80e-18!83;UBERON:0003059!8.80e-18!83;UBERON:0007282!8.80e-18!83;UBERON:0009618!8.80e-18!83;UBERON:0007285!8.80e-18!83;UBERON:0000475!5.34e-17!365;UBERON:0002385!1.20e-14!63;UBERON:0001015!1.20e-14!63;UBERON:0000383!1.20e-14!63;UBERON:0004290!3.98e-14!70;UBERON:0001134!4.08e-14!61;UBERON:0002036!4.08e-14!61;UBERON:0003082!4.08e-14!61;UBERON:0000486!1.15e-12!82;UBERON:0000468!1.72e-11!659;UBERON:0002049!1.68e-10!79;UBERON:0007798!1.68e-10!79;UBERON:0005256!2.93e-10!143;UBERON:0000477!3.98e-09!286;UBERON:0000119!7.25e-09!312;UBERON:0004872!7.41e-09!84;UBERON:0000467!8.27e-09!625;UBERON:0000480!1.11e-08!626;UBERON:0002100!1.31e-08!216;UBERON:0000483!1.46e-08!309;UBERON:0000481!2.39e-08!347;UBERON:0004535!4.36e-08!110;UBERON:0000055!1.15e-07!69;UBERON:0000479!1.25e-07!787;UBERON:0001637!2.01e-07!42;UBERON:0003509!2.01e-07!42;UBERON:0004572!2.01e-07!42;UBERON:0000490!2.12e-07!138;UBERON:0001009!2.16e-07!113;UBERON:0004573!2.88e-07!33;UBERON:0004571!2.88e-07!33;UBERON:0004111!3.03e-07!241;UBERON:0001981!3.37e-07!60;UBERON:0007500!3.37e-07!60;UBERON:0004537!3.37e-07!60;UBERON:0006965!3.37e-07!60;UBERON:0001135!8.70e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0003688;1.68e-10;6!UBERON:0002358;1.68e-10;6!UBERON:0003684;1.68e-10;6!UBERON:0001178;1.68e-10;6!UBERON:0004457;5.06e-09;9!UBERON:0000042;5.06e-09;9!UBERON:0005284;1.39e-08;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,2.73e-10,6;UBERON:0002358,2.73e-10,6;UBERON:0003684,2.73e-10,6;UBERON:0001178,2.73e-10,6;UBERON:0005284,5.61e-09,5 | |||
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| |||
|short_description=p5@SH3D19 | |||
}} |
Revision as of 02:45, 13 September 2013
Short description: | p5@SH3D19 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_SH3D19_5end |
Coexpression cluster: | NA |
Association with transcript: | 5bp_to_ENST00000474743_5end |
EntrezGene: | SH3D19 |
HGNC: | 30418 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 2.42e-17 | 15 |
fibroblast | 1.14e-12 | 76 |
Ontology term | p-value | n |
---|---|---|
omentum | 2.73e-10 | 6 |
peritoneum | 2.73e-10 | 6 |
abdominal cavity | 2.73e-10 | 6 |
visceral peritoneum | 2.73e-10 | 6 |
brain vasculature | 5.61e-09 | 5 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.