FFCP PHASE1:Hg19::chr4:154926362..154926392,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr4:154926362..154926392,+|id=chr4:154926362..154926392,+|ontology_enrichment_celltype=CL:0000057!4.38e-17!75;CL:0000136!3.36e-12!15;CL:0000055!1.16e-11!180;CL:0002620!4.35e-11!23;CL:0002334!7.21e-08!12|ontology_enrichment_celltype_v019=CL:0000136;2.38e-16;13!CL:0002570;2.35e-10;8!CL:0000188;1.26e-09;9!CL:0002334;2.32e-09;12!CL:0000594;9.02e-09;3!CL:0002580;9.61e-09;3!CL:0002577;5.79e-08;3!CL:0002579;8.68e-08;3!CL:0002615;1.19e-07;3!CL:0000197;1.72e-07;6!CL:0000098;1.72e-07;6!CL:0002167;1.72e-07;6!CL:0002504;4.19e-07;3!CL:1000279;4.19e-07;3!CL:1000280;4.19e-07;3!CL:0000349;5.02e-07;19|ontology_enrichment_celltype_v019_2=CL:0000136,4.61e-20,15;CL:0002570,2.36e-10,8;CL:0000188,1.20e-09,9;CL:0002334,2.79e-09,12;CL:0000594,8.84e-09,3;CL:0002580,1.08e-08,3;CL:0002577,3.38e-08,3;CL:0002615,1.06e-07,3;CL:0002579,1.31e-07,3;CL:0000197,1.77e-07,6;CL:0000098,1.77e-07,6;CL:0002167,1.77e-07,6;CL:0002504,2.04e-07,3;CL:1000279,2.04e-07,3;CL:1000280,2.04e-07,3;CL:0000349,4.23e-07,19|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001013!9.54e-10!14;UBERON:0005631!2.37e-08!14;UBERON:0000158!2.37e-08!14;UBERON:0004923!3.49e-08!57;UBERON:0003688!5.08e-07!6;UBERON:0002358!5.08e-07!6;UBERON:0003684!5.08e-07!6;UBERON:0001178!5.08e-07!6;UBERON:0002199!8.69e-07!45;UBERON:0002416!8.69e-07!45|ontology_enrichment_uberon_v019=UBERON:0001013;2.06e-15;14!UBERON:0003688;9.02e-14;6!UBERON:0002358;9.02e-14;6!UBERON:0003684;9.02e-14;6!UBERON:0001178;9.02e-14;6!UBERON:0002385;7.78e-10;31!UBERON:0001015;7.78e-10;31!UBERON:0000383;7.78e-10;31!UBERON:0000310;4.80e-09;10!UBERON:0004457;6.30e-09;9!UBERON:0000042;6.30e-09;9!UBERON:0001443;3.85e-08;11!UBERON:0005284;4.08e-08;5!UBERON:0001134;7.81e-07;16!UBERON:0002036;7.81e-07;16|ontology_enrichment_uberon_v019_2=UBERON:0001013,1.48e-15,14;UBERON:0003688,1.21e-13,6;UBERON:0002358,1.21e-13,6;UBERON:0003684,1.21e-13,6;UBERON:0001178,1.21e-13,6;UBERON:0000310,5.22e-09,10;UBERON:0001443,4.15e-08,11;UBERON:0005284,4.17e-08,5;UBERON:0005631,7.11e-08,14;UBERON:0000158,7.11e-08,14;UBERON:0004923,4.89e-07,66|phase1_expression=4.90531624030503,5.1384125733836,2.39622486963151,2.00146596706261,1.78784437770915,1.74467704820074,0,14.5295570888171,0.261185628199839,0,0,4.36882744260345,3.16520373874144,1.23766352960047,2.65117900582333,3.36162573225888,1.20538905604795,1.46062018077475,0.487932798790507,0.123121058076788,0,0.313454721478088,0,0,0.125542639594803,0,0,0,0,0,0.619264493264304,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.98788780678127,0,0.264818361626438,0,0,0,0,0.24666754841716,0.933633106199299,0.269421344139376,0.163461903113459,6.96244167166684,3.45705554687999,0,0.936480230490962,1.1409436430889,0.747243402759005,0.117434498643765,0.161872944368132,0.280901613404497,2.04154171254893,0.859840221182376,1.65321249881225,0,0,2.73048408581408,0.718618141816238,0.673344455816265,0.625592599359821,1.6623846929051,0,0,0,0,0.717558542755448,1.2813443329114,0.847727604638247,0.600182192168805,0.103052529238439,0.515281080091258,2.04728541964749,0.168776332241266,0.194874010322397,0.252433774244115,1.28869858099219,0,0.355009592516614,0.403008392910561,0.339121184620975,0.193260853163297,0,0,0,0,0,0,0,0,1.56449532329816,0,0,0,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0.115930404975077,0,0.144366447761074,0.462985512576611,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0.063497894292169,0,0,0,0,0,0,0.448524337381443,0.43596006883328,0.4400297149257,0,3.57656445851882,11.834238535784,0,0,0.771622122786426,0,0.266422179016099,1.14382394926518,0,0,5.5375151329935,0.710783897485092,0,0,0,0,0,0,0,2.15662369942424,0,0,5.35690834670043,0,0.895304816199478,0,0,0,0,0,0,0,0,0,0,0,0,0.36807447515742,0.500170521059677,3.25518028439683,10.814484799602,6.42344359669782,7.09660867652706,9.37131319941706,0.902838299183157,0,0,0,0,0.0868836144680828,0.587403472388222,1.02943027143257,0,0,0,1.81876542867756,8.32177197552485,2.72151263996712,12.1572825831201,6.44540287809862,3.08726103876381,3.45975702990393,1.02341449813341,2.2519548960105,2.96836132889982,0,0.355123450626254,0.9033987161519,0,0.464841513839837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325378394664303,0.206082023295445,0,0,0.574265537996172,0,0,0,2.61882649094895,3.37708084397485,1.51620229732984,18.6911226070796,6.67076792005451,3.40906509664404,0.178064071293475,0,0,0,0,0,0,0,0,0,0,1.4825937528313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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr4:154926362..154926392,+ | |||
|id=chr4:154926362..154926392,+ | |||
|ontology_enrichment_celltype=CL:0000057!4.38e-17!75;CL:0000136!3.36e-12!15;CL:0000055!1.16e-11!180;CL:0002620!4.35e-11!23;CL:0002334!7.21e-08!12 | |||
|ontology_enrichment_celltype_v019=CL:0000136;2.38e-16;13!CL:0002570;2.35e-10;8!CL:0000188;1.26e-09;9!CL:0002334;2.32e-09;12!CL:0000594;9.02e-09;3!CL:0002580;9.61e-09;3!CL:0002577;5.79e-08;3!CL:0002579;8.68e-08;3!CL:0002615;1.19e-07;3!CL:0000197;1.72e-07;6!CL:0000098;1.72e-07;6!CL:0002167;1.72e-07;6!CL:0002504;4.19e-07;3!CL:1000279;4.19e-07;3!CL:1000280;4.19e-07;3!CL:0000349;5.02e-07;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,4.61e-20,15;CL:0002570,2.36e-10,8;CL:0000188,1.20e-09,9;CL:0002334,2.79e-09,12;CL:0000594,8.84e-09,3;CL:0002580,1.08e-08,3;CL:0002577,3.38e-08,3;CL:0002615,1.06e-07,3;CL:0002579,1.31e-07,3;CL:0000197,1.77e-07,6;CL:0000098,1.77e-07,6;CL:0002167,1.77e-07,6;CL:0002504,2.04e-07,3;CL:1000279,2.04e-07,3;CL:1000280,2.04e-07,3;CL:0000349,4.23e-07,19 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001013!9.54e-10!14;UBERON:0005631!2.37e-08!14;UBERON:0000158!2.37e-08!14;UBERON:0004923!3.49e-08!57;UBERON:0003688!5.08e-07!6;UBERON:0002358!5.08e-07!6;UBERON:0003684!5.08e-07!6;UBERON:0001178!5.08e-07!6;UBERON:0002199!8.69e-07!45;UBERON:0002416!8.69e-07!45 | |||
|ontology_enrichment_uberon_v019=UBERON:0001013;2.06e-15;14!UBERON:0003688;9.02e-14;6!UBERON:0002358;9.02e-14;6!UBERON:0003684;9.02e-14;6!UBERON:0001178;9.02e-14;6!UBERON:0002385;7.78e-10;31!UBERON:0001015;7.78e-10;31!UBERON:0000383;7.78e-10;31!UBERON:0000310;4.80e-09;10!UBERON:0004457;6.30e-09;9!UBERON:0000042;6.30e-09;9!UBERON:0001443;3.85e-08;11!UBERON:0005284;4.08e-08;5!UBERON:0001134;7.81e-07;16!UBERON:0002036;7.81e-07;16 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001013,1.48e-15,14;UBERON:0003688,1.21e-13,6;UBERON:0002358,1.21e-13,6;UBERON:0003684,1.21e-13,6;UBERON:0001178,1.21e-13,6;UBERON:0000310,5.22e-09,10;UBERON:0001443,4.15e-08,11;UBERON:0005284,4.17e-08,5;UBERON:0005631,7.11e-08,14;UBERON:0000158,7.11e-08,14;UBERON:0004923,4.89e-07,66 | |||
|phase1_expression=4.90531624030503,5.1384125733836,2.39622486963151,2.00146596706261,1.78784437770915,1.74467704820074,0,14.5295570888171,0.261185628199839,0,0,4.36882744260345,3.16520373874144,1.23766352960047,2.65117900582333,3.36162573225888,1.20538905604795,1.46062018077475,0.487932798790507,0.123121058076788,0,0.313454721478088,0,0,0.125542639594803,0,0,0,0,0,0.619264493264304,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.98788780678127,0,0.264818361626438,0,0,0,0,0.24666754841716,0.933633106199299,0.269421344139376,0.163461903113459,6.96244167166684,3.45705554687999,0,0.936480230490962,1.1409436430889,0.747243402759005,0.117434498643765,0.161872944368132,0.280901613404497,2.04154171254893,0.859840221182376,1.65321249881225,0,0,2.73048408581408,0.718618141816238,0.673344455816265,0.625592599359821,1.6623846929051,0,0,0,0,0.717558542755448,1.2813443329114,0.847727604638247,0.600182192168805,0.103052529238439,0.515281080091258,2.04728541964749,0.168776332241266,0.194874010322397,0.252433774244115,1.28869858099219,0,0.355009592516614,0.403008392910561,0.339121184620975,0.193260853163297,0,0,0,0,0,0,0,0,1.56449532329816,0,0,0,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0.115930404975077,0,0.144366447761074,0.462985512576611,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0.063497894292169,0,0,0,0,0,0,0.448524337381443,0.43596006883328,0.4400297149257,0,3.57656445851882,11.834238535784,0,0,0.771622122786426,0,0.266422179016099,1.14382394926518,0,0,5.5375151329935,0.710783897485092,0,0,0,0,0,0,0,2.15662369942424,0,0,5.35690834670043,0,0.895304816199478,0,0,0,0,0,0,0,0,0,0,0,0,0.36807447515742,0.500170521059677,3.25518028439683,10.814484799602,6.42344359669782,7.09660867652706,9.37131319941706,0.902838299183157,0,0,0,0,0.0868836144680828,0.587403472388222,1.02943027143257,0,0,0,1.81876542867756,8.32177197552485,2.72151263996712,12.1572825831201,6.44540287809862,3.08726103876381,3.45975702990393,1.02341449813341,2.2519548960105,2.96836132889982,0,0.355123450626254,0.9033987161519,0,0.464841513839837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325378394664303,0.206082023295445,0,0,0.574265537996172,0,0,0,2.61882649094895,3.37708084397485,1.51620229732984,18.6911226070796,6.67076792005451,3.40906509664404,0.178064071293475,0,0,0,0,0,0,0,0,0,0,1.48259375283136,0.286249773483982,1.48863347743867,2.21465597303108,0.38126038784765,0,0,0,0,1.79872457583315,1.64722217841633,1.64937363283961,0,0,0,0,0,0,0,0,0,0,0.66343897524122,0.876901770507525,0,0,0,0,0,0,0,0,0,0,0.329294892959902,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.4906390476222,0,0,0,0.23874448473769,11.8785872333055,1.53580351049616,0,0,0.222617410045812,0,0,0.398495976502139,0.276283915531148,0,0,0,0.311039587661807,0,0,0,0.789147245095469,0,18.8932883245883,0,0,0,0,0,5.07499702804355,0,0,0,0,0,0.173624994933292,0,0,0,0.110579259931225,0,0,0,0,0.538651809526579,2.62066728448103,0,0,0,0.31900115973192,0.366390373607449,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0.265372693510018,0,0,0,0,0.134802265961354,0,0,0,0,0,0.789168805698781,0,0,25.4010050106522,0,0,0,0,0,0,0,0,0,0,0,0.698906672968121,0,0,0,0,1.64881328030313,0,0,0,0,0,0,0.240476460754601,0.213452994739353,0,0,0,0,0,0,0,0,0,0.101998217636322,0,0,0.273810757783986,0,0,0,1.39641200636127,0.229160424011684,0,0,0,0.223171457441873,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0.326587360109409,0,0,0.340776043570843,0,0,0,0.129282956361551,0,0,0,0.213574825135389,0,0.828478110694391,0,0,0,0,1.08803560673895,1.7548292581589,1.53172788381731,0.655745261419609,0,0,0,0,0,0.110929051536852,0.0620964029413835,0,0,0,0,0,0,0,0.74627401443437,1.16856654923612,0,0,0.50313580350515,0.889811221596536,0.228840068396924,0.756154618816195,0,0,0,25.6387773933255,0,0,0.265841714557995,2.60872530905867,0,1.52322084867518,0.406870733204662,0.727394636810238,0,0,1.59238355479446,0,1.37358282073117,1.6837474438296,0,0,0,0,0,0.231522474323834,0,1.07453304648892,0,0.438568099157414,0,0.192914038270915,0,0,0,0.607719912354764,0,0,0,0,0.327609848846413,0,0,0,0,0,0,0.184105950251841,0,0.622077260032973,0,0,0,0,0,0,0,0,0.318004350653419,0,0.80057074828547,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.66967466827017,0,0,0.0752103283492573,0.80682027481408,0,0,1.31017534008077,0,0,0,0,0,0,0,1.48863353516788,0,0,0,0,0.606965604236632,0.455324382702595,0.0887023701626388,0,4.28720023593546,0,0.0657727735628491,0,0,0.78493092850514,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,2.7314956335032,0.691259661814092,0,0,0,2.11693525095465,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0,0,0,0.735444965261716,0,0,0,0,0.339854229375634,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| |||
|short_description=p@chr4:154926362..154926392,+ | |||
}} |
Revision as of 02:52, 13 September 2013
Short description: | p@chr4:154926362..154926392, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr4:154926362..154926392, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 4.61e-20 | 15 |
mesenchymal stem cell of adipose | 2.36e-10 | 8 |
cell of skeletal muscle | 1.20e-09 | 9 |
preadipocyte | 2.79e-09 | 12 |
skeletal muscle satellite cell | 8.84e-09 | 3 |
preadipocyte of the breast | 1.08e-08 | 3 |
placental epithelial cell | 3.38e-08 | 3 |
adipocyte of omentum tissue | 1.06e-07 | 3 |
omentum preadipocyte | 1.31e-07 | 3 |
receptor cell | 1.77e-07 | 6 |
sensory epithelial cell | 1.77e-07 | 6 |
olfactory epithelial cell | 1.77e-07 | 6 |
enteric smooth muscle cell | 2.04e-07 | 3 |
smooth muscle cell of large intestine | 2.04e-07 | 3 |
smooth muscle cell of colon | 2.04e-07 | 3 |
extraembryonic cell | 4.23e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
adipose tissue | 1.48e-15 | 14 |
omentum | 1.21e-13 | 6 |
peritoneum | 1.21e-13 | 6 |
abdominal cavity | 1.21e-13 | 6 |
visceral peritoneum | 1.21e-13 | 6 |
breast | 5.22e-09 | 10 |
chest | 4.15e-08 | 11 |
brain vasculature | 4.17e-08 | 5 |
extraembryonic membrane | 7.11e-08 | 14 |
membranous layer | 7.11e-08 | 14 |
organ component layer | 4.89e-07 | 66 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.