FFCP PHASE1:Mm9::chr14:68738946..68738957,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=237|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr14:68738946..68738957,-|id=chr14:68738946..68738957,-|ontology_enrichment_celltype=CL:0000117!2.07e-10!23;CL:0000337!2.07e-10!23;CL:0000540!2.01e-08!33;CL:0000047!2.01e-08!33;CL:0000031!2.01e-08!33;CL:0000404!2.01e-08!33|ontology_enrichment_celltype_v019_2=CL:0000117,6.37e-12,23;CL:0000337,6.37e-12,23;CL:0002612,4.58e-11,3;CL:0000540,9.10e-08,33;CL:0000047,9.10e-08,33;CL:0000031,9.10e-08,33;CL:0000404,9.10e-08,33|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002346!1.46e-27!71;UBERON:0003075!1.46e-27!71;UBERON:0007284!1.46e-27!71;UBERON:0001049!4.75e-22!52;UBERON:0005068!4.75e-22!52;UBERON:0006241!4.75e-22!52;UBERON:0007135!4.75e-22!52;UBERON:0004121!3.87e-21!102;UBERON:0000924!3.87e-21!102;UBERON:0006601!3.87e-21!102;UBERON:0001017!2.83e-20!73;UBERON:0005743!2.83e-20!73;UBERON:0000073!5.78e-20!75;UBERON:0001016!5.78e-20!75;UBERON:0000033!6.80e-19!63;UBERON:0003056!1.21e-18!49;UBERON:0002616!9.40e-18!49;UBERON:0000955!4.11e-17!50;UBERON:0006238!4.11e-17!50;UBERON:0007811!2.21e-16!86;UBERON:0003080!1.77e-15!40;UBERON:0000153!5.76e-15!94;UBERON:0002020!5.89e-15!34;UBERON:0002780!1.08e-14!39;UBERON:0001890!1.08e-14!39;UBERON:0006240!1.08e-14!39;UBERON:0002791!8.44e-11!29;UBERON:0003528!8.44e-11!29;UBERON:0001893!8.44e-11!29;UBERON:0002021!5.86e-08!10;UBERON:0000411!5.86e-08!10;UBERON:0001950!5.86e-08!10;UBERON:0002619!1.91e-07!17;UBERON:0000956!2.00e-07!21;UBERON:0001869!2.00e-07!21;UBERON:0000203!2.00e-07!21;UBERON:0003076!2.41e-07!12;UBERON:0003057!2.41e-07!12;UBERON:0002240!4.00e-07!6;UBERON:0005174!4.00e-07!6;UBERON:0001137!4.00e-07!6|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.70e-26,54;UBERON:0001049,3.79e-25,52;UBERON:0005068,3.79e-25,52;UBERON:0006241,3.79e-25,52;UBERON:0007135,3.79e-25,52;UBERON:0001017,2.10e-22,73;UBERON:0001016,1.11e-21,75;UBERON:0002346,1.26e-21,64;UBERON:0003075,1.26e-21,64;UBERON:0007284,1.26e-21,64;UBERON:0002240,2.44e-19,6;UBERON:0005174,2.44e-19,6;UBERON:0001137,2.44e-19,6;UBERON:0002021,1.01e-18,10;UBERON:0000411,1.01e-18,10;UBERON:0001950,1.01e-18,10;UBERON:0010371,2.12e-18,73;UBERON:0002020,1.08e-17,34;UBERON:0004121,1.13e-17,95;UBERON:0000924,1.13e-17,95;UBERON:0006601,1.13e-17,95;UBERON:0003076,1.28e-16,12;UBERON:0003057,1.28e-16,12;UBERON:0001948,4.22e-16,5;UBERON:0002315,4.22e-16,5;UBERON:0002616,4.89e-14,46;UBERON:0000955,1.14e-13,47;UBERON:0006238,1.14e-13,47;UBERON:0010314,1.18e-13,92;UBERON:0003080,3.27e-12,40;UBERON:0002257,4.58e-11,3;UBERON:0003056,5.47e-11,49;UBERON:0002780,9.38e-11,39;UBERON:0001890,9.38e-11,39;UBERON:0006240,9.38e-11,39;UBERON:0002619,1.62e-10,17;UBERON:0000025,4.74e-09,114;UBERON:0003528,7.15e-09,29;UBERON:0002791,7.15e-09,29;UBERON:0001893,7.15e-09,29;UBERON:0000956,2.77e-08,21;UBERON:0001869,2.77e-08,21;UBERON:0000203,2.77e-08,21;UBERON:0004111,3.65e-08,122;UBERON:0001896,8.02e-08,2;UBERON:0002298,8.02e-08,2;UBERON:0005290,8.02e-08,2;UBERON:0010096,8.02e-08,2;UBERON:0002950,2.78e-07,4;UBERON:0001891,2.78e-07,4;UBERON:0009616,2.78e-07,4;UBERON:0010286,2.78e-07,4|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21389876515759,0.528990979272033,0.633831403506179,0,0,0,0,0,0,0,0.103689612308478,0.135005938331691,0,1.14260393761521,1.76694832761291,0.244981598429908,0.383381884072945,0,0,2.17068474744819,2.91852413186863,0.395658863190582,0.548925861614458,0.52091337055676,2.23346399201105,0,1.22238598221448,3.83017161115768,5.41012387036591,3.35519002485541,0.075726193333184,0,0,0,0,0,0,0,0.421333260395256,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0,0,0.346970653532272,0.608930956624282,0.461230994512117,0.753613202763113,0.352766121407114,0,0,0,0,0,0,0,0,0.292780797011547,0.209446706813455,0,0,0,0,1.64769703345305,0.457500602818626,0.251308704225729,0.173824320192276,3.06858548796397,0.62336413367868,1.78465389374533,0.407357455401265,0,0,0,0.910843100738926,0,0.540186389416048,1.50704817835715,0.748401490664606,0.896796041993948,0.374806898238915,0.258703370739016,0,0,0,0,0.278047249225598,0.348252166522167,0,0,0,0,0,0,0.234526059981096,0,0,0,0,0,0,0,0,0,0,0,0,0,0.630869845692382,0.617427674275707,0,0,0.426576501070468,0.928946687441754,0,0,0.22237804384487,0,0,0.164698954724011,0,0,0,0,0,0,0,0.114248512609729,0,0,0,0.140271639780637,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195133647857799,0,0,0.159454768657487,0,0,0,0,0,0,0,2.88991061978026,6.21221938938677,0,0,0.315508219416257,0,0.215423397732799,0,0.222798674082394,0,0.404810701674894,0,0,0,0,0.178065603667255,0.651547837414304,0,0,0.242780636154981,0.302323556964751,0,0,0,0,0,0,0,0,0,0,0.36012218806262,0.388076051348264,0.428674070063185,0,1.96205699362278,0.987294123612726,1.522324745573,0,0,0,0,0,0,0,0,0,6.30446026835733,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0,0.216010681643603,0,0,0.1348643463848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| ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=237 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr14:68738946..68738957,- | |||
|id=chr14:68738946..68738957,- | |||
|ontology_enrichment_celltype=CL:0000117!2.07e-10!23;CL:0000337!2.07e-10!23;CL:0000540!2.01e-08!33;CL:0000047!2.01e-08!33;CL:0000031!2.01e-08!33;CL:0000404!2.01e-08!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,6.37e-12,23;CL:0000337,6.37e-12,23;CL:0002612,4.58e-11,3;CL:0000540,9.10e-08,33;CL:0000047,9.10e-08,33;CL:0000031,9.10e-08,33;CL:0000404,9.10e-08,33 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!1.46e-27!71;UBERON:0003075!1.46e-27!71;UBERON:0007284!1.46e-27!71;UBERON:0001049!4.75e-22!52;UBERON:0005068!4.75e-22!52;UBERON:0006241!4.75e-22!52;UBERON:0007135!4.75e-22!52;UBERON:0004121!3.87e-21!102;UBERON:0000924!3.87e-21!102;UBERON:0006601!3.87e-21!102;UBERON:0001017!2.83e-20!73;UBERON:0005743!2.83e-20!73;UBERON:0000073!5.78e-20!75;UBERON:0001016!5.78e-20!75;UBERON:0000033!6.80e-19!63;UBERON:0003056!1.21e-18!49;UBERON:0002616!9.40e-18!49;UBERON:0000955!4.11e-17!50;UBERON:0006238!4.11e-17!50;UBERON:0007811!2.21e-16!86;UBERON:0003080!1.77e-15!40;UBERON:0000153!5.76e-15!94;UBERON:0002020!5.89e-15!34;UBERON:0002780!1.08e-14!39;UBERON:0001890!1.08e-14!39;UBERON:0006240!1.08e-14!39;UBERON:0002791!8.44e-11!29;UBERON:0003528!8.44e-11!29;UBERON:0001893!8.44e-11!29;UBERON:0002021!5.86e-08!10;UBERON:0000411!5.86e-08!10;UBERON:0001950!5.86e-08!10;UBERON:0002619!1.91e-07!17;UBERON:0000956!2.00e-07!21;UBERON:0001869!2.00e-07!21;UBERON:0000203!2.00e-07!21;UBERON:0003076!2.41e-07!12;UBERON:0003057!2.41e-07!12;UBERON:0002240!4.00e-07!6;UBERON:0005174!4.00e-07!6;UBERON:0001137!4.00e-07!6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.70e-26,54;UBERON:0001049,3.79e-25,52;UBERON:0005068,3.79e-25,52;UBERON:0006241,3.79e-25,52;UBERON:0007135,3.79e-25,52;UBERON:0001017,2.10e-22,73;UBERON:0001016,1.11e-21,75;UBERON:0002346,1.26e-21,64;UBERON:0003075,1.26e-21,64;UBERON:0007284,1.26e-21,64;UBERON:0002240,2.44e-19,6;UBERON:0005174,2.44e-19,6;UBERON:0001137,2.44e-19,6;UBERON:0002021,1.01e-18,10;UBERON:0000411,1.01e-18,10;UBERON:0001950,1.01e-18,10;UBERON:0010371,2.12e-18,73;UBERON:0002020,1.08e-17,34;UBERON:0004121,1.13e-17,95;UBERON:0000924,1.13e-17,95;UBERON:0006601,1.13e-17,95;UBERON:0003076,1.28e-16,12;UBERON:0003057,1.28e-16,12;UBERON:0001948,4.22e-16,5;UBERON:0002315,4.22e-16,5;UBERON:0002616,4.89e-14,46;UBERON:0000955,1.14e-13,47;UBERON:0006238,1.14e-13,47;UBERON:0010314,1.18e-13,92;UBERON:0003080,3.27e-12,40;UBERON:0002257,4.58e-11,3;UBERON:0003056,5.47e-11,49;UBERON:0002780,9.38e-11,39;UBERON:0001890,9.38e-11,39;UBERON:0006240,9.38e-11,39;UBERON:0002619,1.62e-10,17;UBERON:0000025,4.74e-09,114;UBERON:0003528,7.15e-09,29;UBERON:0002791,7.15e-09,29;UBERON:0001893,7.15e-09,29;UBERON:0000956,2.77e-08,21;UBERON:0001869,2.77e-08,21;UBERON:0000203,2.77e-08,21;UBERON:0004111,3.65e-08,122;UBERON:0001896,8.02e-08,2;UBERON:0002298,8.02e-08,2;UBERON:0005290,8.02e-08,2;UBERON:0010096,8.02e-08,2;UBERON:0002950,2.78e-07,4;UBERON:0001891,2.78e-07,4;UBERON:0009616,2.78e-07,4;UBERON:0010286,2.78e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21389876515759,0.528990979272033,0.633831403506179,0,0,0,0,0,0,0,0.103689612308478,0.135005938331691,0,1.14260393761521,1.76694832761291,0.244981598429908,0.383381884072945,0,0,2.17068474744819,2.91852413186863,0.395658863190582,0.548925861614458,0.52091337055676,2.23346399201105,0,1.22238598221448,3.83017161115768,5.41012387036591,3.35519002485541,0.075726193333184,0,0,0,0,0,0,0,0.421333260395256,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0,0,0.346970653532272,0.608930956624282,0.461230994512117,0.753613202763113,0.352766121407114,0,0,0,0,0,0,0,0,0.292780797011547,0.209446706813455,0,0,0,0,1.64769703345305,0.457500602818626,0.251308704225729,0.173824320192276,3.06858548796397,0.62336413367868,1.78465389374533,0.407357455401265,0,0,0,0.910843100738926,0,0.540186389416048,1.50704817835715,0.748401490664606,0.896796041993948,0.374806898238915,0.258703370739016,0,0,0,0,0.278047249225598,0.348252166522167,0,0,0,0,0,0,0.234526059981096,0,0,0,0,0,0,0,0,0,0,0,0,0,0.630869845692382,0.617427674275707,0,0,0.426576501070468,0.928946687441754,0,0,0.22237804384487,0,0,0.164698954724011,0,0,0,0,0,0,0,0.114248512609729,0,0,0,0.140271639780637,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195133647857799,0,0,0.159454768657487,0,0,0,0,0,0,0,2.88991061978026,6.21221938938677,0,0,0.315508219416257,0,0.215423397732799,0,0.222798674082394,0,0.404810701674894,0,0,0,0,0.178065603667255,0.651547837414304,0,0,0.242780636154981,0.302323556964751,0,0,0,0,0,0,0,0,0,0,0.36012218806262,0.388076051348264,0.428674070063185,0,1.96205699362278,0.987294123612726,1.522324745573,0,0,0,0,0,0,0,0,0,6.30446026835733,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0,0.216010681643603,0,0,0.134864346384821,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.821687657318618,0.649604114888975,0,0,0.240390899039938,0.147689527174577,0.100966449948148,0.15241361331,0.100826185136841,0.292373642219257,0.0962118416403295,0.116876902181569,0,0,0,0,0,0,0,0,0,2.82375921308533,2.76195141904306,1.71868654031819,1.71853182343688,0,3.0215755895588,1.35004500046361,0.900642406448441,1.35942722695261,2.07104124700728,2.17953429926771,0,0,0.243106717068294,0.209613162627982,0,0.222246727801615,0.412070114477788,0,0.252697211763798,0,0.188626341386076,0.0936415074698824,0.256100609619477,0.17230640686684,0,0.463537303779422,0.192909220463705,0,0.294397840268795,0.685738504770831,0.532427418478012,0.238436189947321,0,0.0941093804153306,0.169229215783353,0.365855945745545,0,0.135804113845862,0,0.355905054372522,0.689531376628944,1.22769312950907,0.154936841185966,0.192906610981141,0,0,0,0,0,0 | |||
|short_description=p@chr14:68738946..68738957,- | |||
}} |
Revision as of 02:53, 13 September 2013
Short description: | p@chr14:68738946..68738957, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr14:68738946..68738957, - |
Coexpression cluster: | MCL_coexpression_mm9:237 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 6.37e-12 | 23 |
neuroblast (sensu Vertebrata) | 6.37e-12 | 23 |
neuron of the ventral spinal cord | 4.58e-11 | 3 |
neuron | 9.10e-08 | 33 |
neuronal stem cell | 9.10e-08 | 33 |
neuroblast | 9.10e-08 | 33 |
electrically signaling cell | 9.10e-08 | 33 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.