FFCP PHASE1:Mm9::chr15:76342286..76342298,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=13350|HGNC=|MCL_coexpression_id=24|UniProt=Q54AA6,Q9Z2A7|association_with_transcript=-38bp_to_NM_010046,uc007wkn.1_5end|description=CAGE_peak_4_at_Dgat1_5end|id=chr15:76342286..76342298,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002563,1.52e-07,9;CL:0002251,1.52e-07,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000344!6.32e-09!15;UBERON:0000160!5.13e-08!43;UBERON:0001242!5.48e-08!13;UBERON:0000060!5.48e-08!13;UBERON:0001262!5.48e-08!13;UBERON:0004786!5.48e-08!13|ontology_enrichment_uberon_v019_2=UBERON:0000160,4.74e-18,31;UBERON:0000344,1.54e-12,15;UBERON:0001242,4.70e-11,13;UBERON:0001262,4.70e-11,13;UBERON:0004786,4.70e-11,13;UBERON:0005409,2.01e-09,47;UBERON:0003350,1.52e-07,9;UBERON:0004808,1.52e-07,9;UBERON:0001277,1.52e-07,9;UBERON:0004923,4.26e-07,24;UBERON:0000485,5.08e-07,11|phase1_expression=0.80074423552397,4.88565570695105,4.54999239389536,13.3084252975005,13.5241847085514,3.18970616632591,0.700837921786577,0.258246646883153,0.422366166455,0.234064526321993,0,0.319088635981346,0.171200729931206,0.34968160967599,0,0.202475267389826,0,0.157731082679119,0.274228867211478,0.42438965179803,2.21112554392781,0.595745707205312,0.522399578277871,1.59992422793407,2.52350209173887,5.16808767703518,5.1691439539089,4.09395342103189,3.99049180858385,3.52842181663903,1.55211357458713,0,0.61506478758457,0,2.02196133825892,1.32987716286794,2.6542016314108,1.67412652294763,0,0.523523743973798,1.76469446409304,4.78131839470912,2.91306211818692,0.503587271902309,0.811015449756117,0.917733760808408,0.782391344348039,0.872100625521786,1.31811709640683,1.36100929351998,1.1198913730029,0,0,0,0,1.02903774414379,0,0,1.41621522601718,0,1.90149421051854,0.338844532069132,1.77858959222228,0.449949858640699,1.97773272513395,0.7104801149461,0.599200221036809,0.768436610643109,0.622137673850866,0.540023753326763,0.210324961351382,1.14260393761521,0.883474163806454,0.857435594504678,1.15014565221884,0,1.10115880999389,1.14918604276669,0.46081959976873,1.18697658957174,0.548925861614458,1.04182674111352,0.837548997004143,0.56276261003168,2.44477196442896,1.47314292736834,0.854230084794618,0.559198337475902,0.227178579999552,0.377857800533928,1.15945795480671,1.72084775396277,0,1.07940638327563,1.29955283489534,0.448026887097336,0.421333260395256,0.852151612890289,1.03914401841148,0.35333957451034,1.26759077799012,0,0,0,0.432982082022428,0.506719730950197,0,2.62622923353838,0.258937883647172,0.445326417194474,0.173485326766136,0.913396434936424,0.691846491768175,0.904335843315735,0.352766121407114,1.38233250462643,0.494389935468748,2.02439099687876,0.884610551949874,0.808834249737046,0.220841518460394,0,1.86391761218122,0.878342391034642,0.83778682725382,3.0654846625031,0.11981512450592,2.39961092397363,0.508280908292259,1.04853447583376,0,0.753926112677186,1.39059456153821,1.02286182932132,1.0389402227978,0.486723789203273,0.203678727700633,0.248813941220186,0.505445516867349,1.68353484709179,0.390361328888111,0.919608417733892,0.540186389416048,0.452114453507145,0.476255494059295,0.512454881139399,0.468508622798644,0.517406741478031,0,0,0.703804496655795,0.876782929710299,0.278047249225598,0,0,0.398068533636986,0.702213187313235,0,0.852490498186778,0,0.703578179943289,0.36012412292203,0.23674473558521,0.787056926989615,0.154267112887378,1.16266972375204,0,0.700592054203017,0.822799249567402,0.492502392237286,1.13496333364198,0.877199924551994,0.219550115291051,1.20785776884335,0.841159794256509,0.720332286654991,3.96502539580558,1.05780226665418,0.213288250535234,0.696710015581316,0.38660238396628,0.605050573870028,1.55664630691409,1.33157938278791,3.79623249235609,2.63518327558417,2.76468729680296,2.18852119245266,1.75467678407208,4.49409704327111,2.59365659849633,2.78797782556114,0.379335801906163,0.799739588268102,0,0.203651327845314,0.387904974335251,0.771494018793504,0.569128834118316,0.295220295959204,0.784993639206874,0.987177311374404,1.1858105083486,0.166845105716094,0.393117990226406,0,0.608580364165509,0.72353147925725,1.2731292589071,0.287696137450811,1.94562272130042,0.549122826376163,0,2.23284568601102,0.936113019343682,0.757736633841335,0.896987067609561,0.964887042726734,0.369506380333209,0.568474235311454,0.325929952884052,0.169745085775188,0.469380496577004,1.00503754465089,0.476087281772027,0.585400943573396,0.472905432318573,0.44292937929755,0.318909537314974,0.655453258862952,0.345369963731791,0.144649058581512,0,0.54390568381871,1.96705709207614,0.551873492609465,1.12385412991454,0.820481806145422,0.327869890753351,0.757412781613119,0,0,0.215423397732799,0.477937595905104,0.222798674082394,0.566153061577665,0,0,0.790575555893047,0.963963949265421,0.567760340833074,0,0.81443479676788,0.824850614862677,0,0.728341908464944,0.604647113929502,0.565815239267694,1.18120757152309,0.614870295887855,1.03371317267288,0,0,0.948110273807448,0,0,0.680879211507576,0.900305470156551,0.776152102696527,0.428674070063185,1.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| ||
|EntrezGene=13350 | |||
|HGNC= | |||
|MCL_coexpression_id=24 | |||
|UniProt=Q54AA6,Q9Z2A7 | |||
|association_with_transcript=-38bp_to_NM_010046,uc007wkn.1_5end | |||
|description=CAGE_peak_4_at_Dgat1_5end | |||
|id=chr15:76342286..76342298,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,1.52e-07,9;CL:0002251,1.52e-07,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!6.32e-09!15;UBERON:0000160!5.13e-08!43;UBERON:0001242!5.48e-08!13;UBERON:0000060!5.48e-08!13;UBERON:0001262!5.48e-08!13;UBERON:0004786!5.48e-08!13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,4.74e-18,31;UBERON:0000344,1.54e-12,15;UBERON:0001242,4.70e-11,13;UBERON:0001262,4.70e-11,13;UBERON:0004786,4.70e-11,13;UBERON:0005409,2.01e-09,47;UBERON:0003350,1.52e-07,9;UBERON:0004808,1.52e-07,9;UBERON:0001277,1.52e-07,9;UBERON:0004923,4.26e-07,24;UBERON:0000485,5.08e-07,11 | |||
|phase1_expression=0.80074423552397,4.88565570695105,4.54999239389536,13.3084252975005,13.5241847085514,3.18970616632591,0.700837921786577,0.258246646883153,0.422366166455,0.234064526321993,0,0.319088635981346,0.171200729931206,0.34968160967599,0,0.202475267389826,0,0.157731082679119,0.274228867211478,0.42438965179803,2.21112554392781,0.595745707205312,0.522399578277871,1.59992422793407,2.52350209173887,5.16808767703518,5.1691439539089,4.09395342103189,3.99049180858385,3.52842181663903,1.55211357458713,0,0.61506478758457,0,2.02196133825892,1.32987716286794,2.6542016314108,1.67412652294763,0,0.523523743973798,1.76469446409304,4.78131839470912,2.91306211818692,0.503587271902309,0.811015449756117,0.917733760808408,0.782391344348039,0.872100625521786,1.31811709640683,1.36100929351998,1.1198913730029,0,0,0,0,1.02903774414379,0,0,1.41621522601718,0,1.90149421051854,0.338844532069132,1.77858959222228,0.449949858640699,1.97773272513395,0.7104801149461,0.599200221036809,0.768436610643109,0.622137673850866,0.540023753326763,0.210324961351382,1.14260393761521,0.883474163806454,0.857435594504678,1.15014565221884,0,1.10115880999389,1.14918604276669,0.46081959976873,1.18697658957174,0.548925861614458,1.04182674111352,0.837548997004143,0.56276261003168,2.44477196442896,1.47314292736834,0.854230084794618,0.559198337475902,0.227178579999552,0.377857800533928,1.15945795480671,1.72084775396277,0,1.07940638327563,1.29955283489534,0.448026887097336,0.421333260395256,0.852151612890289,1.03914401841148,0.35333957451034,1.26759077799012,0,0,0,0.432982082022428,0.506719730950197,0,2.62622923353838,0.258937883647172,0.445326417194474,0.173485326766136,0.913396434936424,0.691846491768175,0.904335843315735,0.352766121407114,1.38233250462643,0.494389935468748,2.02439099687876,0.884610551949874,0.808834249737046,0.220841518460394,0,1.86391761218122,0.878342391034642,0.83778682725382,3.0654846625031,0.11981512450592,2.39961092397363,0.508280908292259,1.04853447583376,0,0.753926112677186,1.39059456153821,1.02286182932132,1.0389402227978,0.486723789203273,0.203678727700633,0.248813941220186,0.505445516867349,1.68353484709179,0.390361328888111,0.919608417733892,0.540186389416048,0.452114453507145,0.476255494059295,0.512454881139399,0.468508622798644,0.517406741478031,0,0,0.703804496655795,0.876782929710299,0.278047249225598,0,0,0.398068533636986,0.702213187313235,0,0.852490498186778,0,0.703578179943289,0.36012412292203,0.23674473558521,0.787056926989615,0.154267112887378,1.16266972375204,0,0.700592054203017,0.822799249567402,0.492502392237286,1.13496333364198,0.877199924551994,0.219550115291051,1.20785776884335,0.841159794256509,0.720332286654991,3.96502539580558,1.05780226665418,0.213288250535234,0.696710015581316,0.38660238396628,0.605050573870028,1.55664630691409,1.33157938278791,3.79623249235609,2.63518327558417,2.76468729680296,2.18852119245266,1.75467678407208,4.49409704327111,2.59365659849633,2.78797782556114,0.379335801906163,0.799739588268102,0,0.203651327845314,0.387904974335251,0.771494018793504,0.569128834118316,0.295220295959204,0.784993639206874,0.987177311374404,1.1858105083486,0.166845105716094,0.393117990226406,0,0.608580364165509,0.72353147925725,1.2731292589071,0.287696137450811,1.94562272130042,0.549122826376163,0,2.23284568601102,0.936113019343682,0.757736633841335,0.896987067609561,0.964887042726734,0.369506380333209,0.568474235311454,0.325929952884052,0.169745085775188,0.469380496577004,1.00503754465089,0.476087281772027,0.585400943573396,0.472905432318573,0.44292937929755,0.318909537314974,0.655453258862952,0.345369963731791,0.144649058581512,0,0.54390568381871,1.96705709207614,0.551873492609465,1.12385412991454,0.820481806145422,0.327869890753351,0.757412781613119,0,0,0.215423397732799,0.477937595905104,0.222798674082394,0.566153061577665,0,0,0.790575555893047,0.963963949265421,0.567760340833074,0,0.81443479676788,0.824850614862677,0,0.728341908464944,0.604647113929502,0.565815239267694,1.18120757152309,0.614870295887855,1.03371317267288,0,0,0.948110273807448,0,0,0.680879211507576,0.900305470156551,0.776152102696527,0.428674070063185,1.41872186913819,0.891844088010353,0.164549020602121,0.304464949114599,0.23467170806371,1.90648863777438,0,0.49465875882444,0.484393280087717,0.301564624640779,0.477489376012546,0.492422699235184,3.49777003955821,0.370850604021019,0.512612642393558,0.82554747185289,0,0.188368457004691,0,0.457556346413045,0.169978429993855,0,0.414599921413271,0.954670618015114,0.316335993581135,0.406638934253697,0.756037385752609,0.209088296014469,0.218362563746178,0.134864346384821,1.07449492442937,0.785267825952089,0.518459893167171,0.621339313086926,3.94585057078933,0.598066184175915,0.66183396182839,0.972255941720238,0.387479470433193,0.168956125490778,0.58678619322877,0.39061315453185,0.524296722128554,5.07326653734613,2.88030006257865,0.316011120628178,0.202725215290164,0.308132871494482,0.649604114888975,0.358053391334963,0,0.120195449519969,0.443068581523732,0.100966449948148,0.304827226619999,0.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| |||
|short_description=p4@Dgat1 | |||
}} | |||
Revision as of 10:58, 13 September 2013
| Short description: | p4@Dgat1 |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_4_at_Dgat1_5end |
| Coexpression cluster: | MCL_coexpression_mm9:24 |
| Association with transcript: | -38bp_to_NM_010046, uc007wkn.1_5end |
| EntrezGene: | Dgat1 |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| intestinal epithelial cell | 1.52e-07 | 9 |
| epithelial cell of alimentary canal | 1.52e-07 | 9 |
| Ontology term | p-value | n |
|---|---|---|
| intestine | 4.74e-18 | 31 |
| mucosa | 1.54e-12 | 15 |
| intestinal mucosa | 4.70e-11 | 13 |
| wall of intestine | 4.70e-11 | 13 |
| gastrointestinal system mucosa | 4.70e-11 | 13 |
| gastrointestinal system | 2.01e-09 | 47 |
| epithelium of mucosa | 1.52e-07 | 9 |
| gastrointestinal system epithelium | 1.52e-07 | 9 |
| intestinal epithelium | 1.52e-07 | 9 |
| organ component layer | 4.26e-07 | 24 |
| simple columnar epithelium | 5.08e-07 | 11 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
