FFCP PHASE1:Mm9::chr16:17797310..17797321,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=224024|HGNC=|MCL_coexpression_id=475|UniProt=P59222,Q58A84|association_with_transcript=-53bp_to_ENSMUST00000012161,NM_153790,uc007ymd.1,uc007yme.1_5end|description=CAGE_peak_2_at_Scarf2_5end|id=chr16:17797310..17797321,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002048!1.27e-07!14;UBERON:0000117!1.27e-07!14;UBERON:0000171!1.27e-07!14;UBERON:0000170!1.27e-07!14;UBERON:0005597!1.27e-07!14;UBERON:0000118!1.27e-07!14|ontology_enrichment_uberon_v019_2=UBERON:0002048,1.46e-08,14;UBERON:0000117,1.46e-08,14;UBERON:0000171,1.46e-08,14;UBERON:0000170,1.46e-08,14;UBERON:0005597,1.46e-08,14;UBERON:0000118,1.46e-08,14|phase1_expression=2.08193501236232,0,0,0,0,0,0.233612640595526,0,0,0,0,0,0,0,0,0.404950534779652,0,0,0,0,1.78590909317247,0.0992909512008853,0,0,0,0,0,0.215471232685889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.04304726282771,6.08261587317087,5.13930906052708,11.7358701652206,0.218025156380447,0.878744730937887,1.55543919259427,4.05960622713551,0,0,0,0,2.05807548828758,4.87106847895886,4.64104883049698,0,0,1.26766280701236,7.45457970552091,7.11435836888911,0,2.96659908770092,1.4209602298922,1.79760066311043,1.15265491596466,0.622137673850866,0,0,0.285650984403804,0.441737081903227,0,0,0,0,0.127687338085188,0.153606533256243,0,0.0914876436024097,0,0.279182999001381,0,0.15279824777681,0.589257170947335,0.284743361598206,0.186399445825301,0.605809546665472,0.377857800533928,0.579728977403356,0.860423876981386,0,0,0,0,0.983110940922263,13.6344258062446,10.1316541795119,12.7202246823722,0.845060518660083,14.115912515575,15.2883143823987,7.11066703153331,0.649473123033642,1.26679932737549,0,0.22836775943812,0,0.742210695324124,1.04091196059682,0.608930956624282,1.38369298353635,0.301445281105245,0.705532242814229,0.628332956648377,1.48316980640624,2.02439099687876,0,5.98537344805414,3.75430581382669,2.42437626567611,0,0.585561594023094,0.41889341362691,1.27728527604296,0,0,0,0.449371918214468,0.457500602818626,0.125654352112864,0.173824320192276,0.255715457330331,0,0,2.13862664085664,3.6078021476927,0.252722758433675,0.631325567659422,1.17108398666433,1.83921683546778,1.0803727788321,0.90422890701429,0.95251098811859,0.768682321709099,0.655912071918102,0.517406741478031,3.44908788692548,5.48407632486676,5.98233822157426,4.60311038097907,2.50242524303038,5.92028683087683,2.26360350048738,4.77682240364384,0,0,0,1.03562886267751,1.40715635988658,1.44049649168812,1.18372367792605,0.983821158737019,1.07986979021165,0.697601834251224,0.536546802799238,0.350296027101508,1.15191894939436,1.47750717671186,1.29710095273369,1.16959989940266,0.878200461164203,1.47627060636409,0,0.308713837137853,0,0.528901133327089,1.49301775374664,2.78684006232526,1.54640953586512,1.00841762311671,0.444756087689741,1.52180500890047,2.84717436926707,0.494096864172033,2.01068167040216,1.39269530428806,1.75467678407208,0,0.648414149624083,0.796565093017469,0.948339504765408,0.913988100877831,1.1270773567308,1.22190796707189,1.55161989734101,1.47285221769669,2.08680572510049,1.62371162777562,1.255989822731,0.493588655687202,0,0.500535317148282,0.196558995113203,0.224862112384854,0,0.482354319504834,0.50925170356284,0.575392274901621,0,0,0,0.744281895337007,0,0.505157755894224,0,0,6.09685527549795,1.89491411770485,2.60743962307241,3.05541154395339,1.87752198630802,2.01007508930179,3.09456733151818,4.68320754858717,3.94087860265477,3.98636441367795,3.98636921643718,5.07976275618788,7.59813920209941,4.62876987460837,0,0,0,0.827810238914197,0.160550589987792,0.117211686592203,2.45902418065013,2.01976741763498,0.631016438832513,0.390438744296638,2.36965737506079,0.955875191810208,1.33679204449436,1.13230612315533,1.21443210502468,1.46127928955656,1.18586333383957,0.642642632843614,1.13552068166615,3.91744328067962,3.90928702448583,3.62934270539578,0,1.69946445308487,1.209294227859,0.565815239267694,0.885905678642318,0.922305443831782,0.775284879504663,1.09060118843252,1.42598951353889,1.8962205476149,0,0,0,1.62054984628179,1.55230420539305,1.50035924522115,1.59606210278046,2.31879462882692,2.46823530903181,1.522324745573,1.87737366450968,0.63549621259146,0.441056796109924,1.31909002353184,1.93757312035087,2.29189114726992,2.14870219205646,0.656563598980245,0.874442509889552,0.370850604021019,0.170870880797853,2.47664241555867,1.11116716421827,0.565105371014073,0.546776910884101,0.457556346413045,0,0,0,0.954670618015114,3.79603192297362,2.23651413839534,1.72808545314882,0.836353184057875,1.9652630737156,2.83215127408124,2.56225712748541,1.83229159388821,1.29614973291793,0,0,2.69129782879162,1.48912641411388,1.75006069509643,1.6790777052105,1.68956125490778,1.05621514781179,2.3436789271911,1.04859344425711,0.724752362478018,0.288030006257865,0.948033361884535,1.01362607645082,0.718976700153791,0.649604114888975,0.895133478337407,0.39736270956253,0.721172697119813,0.590758108698309,0.605798699688886,1.06689529317,0.70578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| ||
|EntrezGene=224024 | |||
|HGNC= | |||
|MCL_coexpression_id=475 | |||
|UniProt=P59222,Q58A84 | |||
|association_with_transcript=-53bp_to_ENSMUST00000012161,NM_153790,uc007ymd.1,uc007yme.1_5end | |||
|description=CAGE_peak_2_at_Scarf2_5end | |||
|id=chr16:17797310..17797321,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002048!1.27e-07!14;UBERON:0000117!1.27e-07!14;UBERON:0000171!1.27e-07!14;UBERON:0000170!1.27e-07!14;UBERON:0005597!1.27e-07!14;UBERON:0000118!1.27e-07!14 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002048,1.46e-08,14;UBERON:0000117,1.46e-08,14;UBERON:0000171,1.46e-08,14;UBERON:0000170,1.46e-08,14;UBERON:0005597,1.46e-08,14;UBERON:0000118,1.46e-08,14 | |||
|phase1_expression=2.08193501236232,0,0,0,0,0,0.233612640595526,0,0,0,0,0,0,0,0,0.404950534779652,0,0,0,0,1.78590909317247,0.0992909512008853,0,0,0,0,0,0.215471232685889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.04304726282771,6.08261587317087,5.13930906052708,11.7358701652206,0.218025156380447,0.878744730937887,1.55543919259427,4.05960622713551,0,0,0,0,2.05807548828758,4.87106847895886,4.64104883049698,0,0,1.26766280701236,7.45457970552091,7.11435836888911,0,2.96659908770092,1.4209602298922,1.79760066311043,1.15265491596466,0.622137673850866,0,0,0.285650984403804,0.441737081903227,0,0,0,0,0.127687338085188,0.153606533256243,0,0.0914876436024097,0,0.279182999001381,0,0.15279824777681,0.589257170947335,0.284743361598206,0.186399445825301,0.605809546665472,0.377857800533928,0.579728977403356,0.860423876981386,0,0,0,0,0.983110940922263,13.6344258062446,10.1316541795119,12.7202246823722,0.845060518660083,14.115912515575,15.2883143823987,7.11066703153331,0.649473123033642,1.26679932737549,0,0.22836775943812,0,0.742210695324124,1.04091196059682,0.608930956624282,1.38369298353635,0.301445281105245,0.705532242814229,0.628332956648377,1.48316980640624,2.02439099687876,0,5.98537344805414,3.75430581382669,2.42437626567611,0,0.585561594023094,0.41889341362691,1.27728527604296,0,0,0,0.449371918214468,0.457500602818626,0.125654352112864,0.173824320192276,0.255715457330331,0,0,2.13862664085664,3.6078021476927,0.252722758433675,0.631325567659422,1.17108398666433,1.83921683546778,1.0803727788321,0.90422890701429,0.95251098811859,0.768682321709099,0.655912071918102,0.517406741478031,3.44908788692548,5.48407632486676,5.98233822157426,4.60311038097907,2.50242524303038,5.92028683087683,2.26360350048738,4.77682240364384,0,0,0,1.03562886267751,1.40715635988658,1.44049649168812,1.18372367792605,0.983821158737019,1.07986979021165,0.697601834251224,0.536546802799238,0.350296027101508,1.15191894939436,1.47750717671186,1.29710095273369,1.16959989940266,0.878200461164203,1.47627060636409,0,0.308713837137853,0,0.528901133327089,1.49301775374664,2.78684006232526,1.54640953586512,1.00841762311671,0.444756087689741,1.52180500890047,2.84717436926707,0.494096864172033,2.01068167040216,1.39269530428806,1.75467678407208,0,0.648414149624083,0.796565093017469,0.948339504765408,0.913988100877831,1.1270773567308,1.22190796707189,1.55161989734101,1.47285221769669,2.08680572510049,1.62371162777562,1.255989822731,0.493588655687202,0,0.500535317148282,0.196558995113203,0.224862112384854,0,0.482354319504834,0.50925170356284,0.575392274901621,0,0,0,0.744281895337007,0,0.505157755894224,0,0,6.09685527549795,1.89491411770485,2.60743962307241,3.05541154395339,1.87752198630802,2.01007508930179,3.09456733151818,4.68320754858717,3.94087860265477,3.98636441367795,3.98636921643718,5.07976275618788,7.59813920209941,4.62876987460837,0,0,0,0.827810238914197,0.160550589987792,0.117211686592203,2.45902418065013,2.01976741763498,0.631016438832513,0.390438744296638,2.36965737506079,0.955875191810208,1.33679204449436,1.13230612315533,1.21443210502468,1.46127928955656,1.18586333383957,0.642642632843614,1.13552068166615,3.91744328067962,3.90928702448583,3.62934270539578,0,1.69946445308487,1.209294227859,0.565815239267694,0.885905678642318,0.922305443831782,0.775284879504663,1.09060118843252,1.42598951353889,1.8962205476149,0,0,0,1.62054984628179,1.55230420539305,1.50035924522115,1.59606210278046,2.31879462882692,2.46823530903181,1.522324745573,1.87737366450968,0.63549621259146,0.441056796109924,1.31909002353184,1.93757312035087,2.29189114726992,2.14870219205646,0.656563598980245,0.874442509889552,0.370850604021019,0.170870880797853,2.47664241555867,1.11116716421827,0.565105371014073,0.546776910884101,0.457556346413045,0,0,0,0.954670618015114,3.79603192297362,2.23651413839534,1.72808545314882,0.836353184057875,1.9652630737156,2.83215127408124,2.56225712748541,1.83229159388821,1.29614973291793,0,0,2.69129782879162,1.48912641411388,1.75006069509643,1.6790777052105,1.68956125490778,1.05621514781179,2.3436789271911,1.04859344425711,0.724752362478018,0.288030006257865,0.948033361884535,1.01362607645082,0.718976700153791,0.649604114888975,0.895133478337407,0.39736270956253,0.721172697119813,0.590758108698309,0.605798699688886,1.06689529317,0.705783295957884,0.487289403698762,0.865906574762965,0.818138315270983,1.13365191807606,3.32978930061097,5.9211145362254,4.02923079273788,2.31827512838629,2.43987218086537,3.84618410961257,1.71494703263253,1.00314420807073,0,0,0.572895513439397,0,0.685082519770642,0,0,0,0,0.51776031175182,0.31136204275253,1.99512436700516,3.24393850932855,1.45864030240976,0.838452650511929,1.10306105070008,2.00022055021454,2.06035057238894,1.60459604795908,2.77966932940177,1.52087579934144,0.565879024158229,2.62196220915671,2.4969809437899,1.49332219284595,2.38146845641537,2.54945517078682,1.35036454324594,2.47251540481984,1.61918812147837,1.02860775715625,1.59728225543404,1.90748951957857,2.61623549938191,1.88218760830661,2.03075058940024,2.19513567447327,1.052278845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| |||
|short_description=p2@Scarf2 | |||
}} |
Revision as of 12:04, 13 September 2013
Short description: | p2@Scarf2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Scarf2_5end |
Coexpression cluster: | MCL_coexpression_mm9:475 |
Association with transcript: | -53bp_to_ENSMUST00000012161, NM_153790, uc007ymd.1, uc007yme.1_5end |
EntrezGene: | Scarf2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lung | 1.46e-08 | 14 |
respiratory tube | 1.46e-08 | 14 |
respiration organ | 1.46e-08 | 14 |
pair of lungs | 1.46e-08 | 14 |
lung primordium | 1.46e-08 | 14 |
lung bud | 1.46e-08 | 14 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.