FFCP PHASE1:Hg19::chr5:10307874..10307930,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=134147|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=25090|TSSclassifier=S|UniProt=|association_with_transcript=20bp_to_ENST00000514202_5end|coexpression_cluster_id=C4444|description=CAGE_peak_2_at_CMBL_5end|id=chr5:10307874..10307930,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0003104;2.45e-08;31|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000481!5.66e-19!347;UBERON:0000475!2.87e-13!365;UBERON:0003104!7.48e-12!238;UBERON:0009142!7.48e-12!238;UBERON:0000468!2.60e-10!659;UBERON:0002100!2.94e-10!216;UBERON:0000477!2.12e-09!286;UBERON:0005256!1.17e-08!143;UBERON:0000119!1.23e-08!312;UBERON:0000483!2.69e-08!309;UBERON:0000922!1.02e-07!612;UBERON:0000062!1.19e-07!511;UBERON:0001007!1.21e-07!155;UBERON:0001555!1.21e-07!155;UBERON:0007026!1.21e-07!155;UBERON:0000467!1.78e-07!625;UBERON:0000490!1.80e-07!138;UBERON:0004921!2.15e-07!129;UBERON:0004185!2.15e-07!129;UBERON:0000480!2.39e-07!626;UBERON:0002050!2.44e-07!605;UBERON:0005423!2.44e-07!605;UBERON:0000923!3.70e-07!604;UBERON:0005291!3.70e-07!604;UBERON:0006598!3.70e-07!604;UBERON:0002532!3.70e-07!604|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0003104,9.44e-14,160;UBERON:0009142,9.44e-14,160;UBERON:0002100,4.66e-09,199;UBERON:0005256,1.13e-08,122;UBERON:0011216,3.86e-08,223;UBERON:0000119,3.98e-08,309;UBERON:0000490,7.55e-08,148;UBERON:0000483,8.56e-08,306|phase1_expression=3.27021082687002,3.42560838225573,3.24195129420734,3.00219895059391,4.46961094427288,2.61701557230111,0,3.15859936713415,8.61912573059467,0.491467873003018,0,3.9319446983431,5.01157258634062,36.2635414172937,27.8373795611449,6.05092631806598,3.61616716814386,8.76372108464848,3.41552959153355,3.20114750999649,6.5280221198161,2.82109249330279,4.29353980696585,3.01123735160345,2.63639543149086,0.152826811495903,0.246301768349837,0.157421562627358,0,0,0,0,0.90361775633475,0.369754010166788,0,0,6.75281010470149,0,0,0,6.71746422719773,6.47787332037959,7.7272670290256,0,0,0,0,0.411167888021826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16072558669708,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,3.423993102076,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.75227465255847,7.37770945674,3.70801429346238,3.97583067623023,3.50936537445123,4.34539556882471,7.15757352345989,0.973269740605272,3.97046232089085,4.43458794925128,4.0404001418838,14.2112296915018,3.64295288292542,2.59549109949101,0,0,0,0,0,0,2.58391129576717,6.881876760849,2.77712401286075,8.47961912886015,5.87299210693868,1.6507082516404,4.59788926380983,5.94358546089456,7.47109151642091,3.3472061276467,6.8480983908555,6.0821768457481,6.83373761134875,2.20597848207521,9.72170337458112,5.35798369704479,4.4905874525234,3.71617885594963,4.5994991239765,0,2.93122790288652,0,0,3.92484646928281,0,4.05217637326655,3.83986624358335,3.15520282823695,4.965357350777,3.36406560085384,2.1349799145941,2.4666754841716,3.7345324247972,3.09834545760283,3.75962377160955,14.0762407709786,15.55674996096,3.74914290934075,6.24320153660641,4.56377457235559,2.39117888882882,3.17073146338165,2.42809416552197,1.82586048712923,7.96201267894084,3.80786383666481,8.98934296229159,1.18800285728205,3.21447008062124,3.64064544775211,0.718618141816238,2.69337782326506,1.62654075833553,3.87889761677856,2.19488810440419,1.5324389789951,4.35690370829131,2.38207584636044,2.15267562826634,3.20336083227851,3.60284231971255,2.70081986475962,4.43125875725287,5.41045134095821,3.53622027030021,1.18143432568886,2.53336213419116,1.00973509697646,4.69454483075727,11.4768700341356,1.42003837006646,2.01504196455281,2.88253006927829,1.15956511897978,1.09098448236334,2.29443676311203,4.14710600840624,1.19276791489337,2.32387885739037,3.52447587052259,4.28945446488568,2.55484151353081,4.69348596989448,4.5026865673502,8.28809528114883,4.64367928031979,10.1063127433742,13.4869752045422,11.4637589253109,13.978639733242,11.5808671369014,11.7654899809899,9.25355414533277,16.7190822118604,15.6977172100277,12.6966561792309,8.11971000087113,2.80483547606892,6.9967581926338,0,27.8861076608028,4.91413608338813,4.72631925345123,0,3.81264159483652,6.6911446016425,0.439001141634502,0,0.201057944823262,5.83307204498736,2.93227474779292,13.5191522086345,2.88662684050547,2.66639931442677,7.51415643109259,3.75352764178792,1.38895653772983,2.09279567458058,12.6432703673484,10.3018339451385,2.95460407304877,0.468008530278475,2.0808362720422,1.87467667973554,0.335964256397719,0.141775097242386,2.32852159027406,4.65014301622339,3.4504441124869,0.492663237895943,0.968532774145487,1.24396869324463,2.01767934783746,2.90357596880674,0.253991577168676,0,1.17217447210047,1.71072446022705,2.05654985406647,3.60411669412701,2.00078502841405,4.148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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=134147 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25090 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=20bp_to_ENST00000514202_5end | |||
|coexpression_cluster_id=C4444 | |||
|description=CAGE_peak_2_at_CMBL_5end | |||
|id=chr5:10307874..10307930,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0003104;2.45e-08;31 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000481!5.66e-19!347;UBERON:0000475!2.87e-13!365;UBERON:0003104!7.48e-12!238;UBERON:0009142!7.48e-12!238;UBERON:0000468!2.60e-10!659;UBERON:0002100!2.94e-10!216;UBERON:0000477!2.12e-09!286;UBERON:0005256!1.17e-08!143;UBERON:0000119!1.23e-08!312;UBERON:0000483!2.69e-08!309;UBERON:0000922!1.02e-07!612;UBERON:0000062!1.19e-07!511;UBERON:0001007!1.21e-07!155;UBERON:0001555!1.21e-07!155;UBERON:0007026!1.21e-07!155;UBERON:0000467!1.78e-07!625;UBERON:0000490!1.80e-07!138;UBERON:0004921!2.15e-07!129;UBERON:0004185!2.15e-07!129;UBERON:0000480!2.39e-07!626;UBERON:0002050!2.44e-07!605;UBERON:0005423!2.44e-07!605;UBERON:0000923!3.70e-07!604;UBERON:0005291!3.70e-07!604;UBERON:0006598!3.70e-07!604;UBERON:0002532!3.70e-07!604 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003104,9.44e-14,160;UBERON:0009142,9.44e-14,160;UBERON:0002100,4.66e-09,199;UBERON:0005256,1.13e-08,122;UBERON:0011216,3.86e-08,223;UBERON:0000119,3.98e-08,309;UBERON:0000490,7.55e-08,148;UBERON:0000483,8.56e-08,306 | |||
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| |||
|short_description=p2@CMBL | |||
}} |
Revision as of 12:30, 13 September 2013
Short description: | p2@CMBL |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_CMBL_5end |
Coexpression cluster: | C4444_Nucleus_small_Pericytes_Anulus_colon_skeletal_lung |
Association with transcript: | 20bp_to_ENST00000514202_5end |
EntrezGene: | CMBL |
HGNC: | 25090 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesenchyme | 9.44e-14 | 160 |
entire embryonic mesenchyme | 9.44e-14 | 160 |
trunk | 4.66e-09 | 199 |
trunk mesenchyme | 1.13e-08 | 122 |
organ system subdivision | 3.86e-08 | 223 |
cell layer | 3.98e-08 | 309 |
unilaminar epithelium | 7.55e-08 | 148 |
epithelium | 8.56e-08 | 306 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.