FFCP PHASE1:Mm9::chr16:4003721..4003735,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=52864|HGNC=|MCL_coexpression_id=616|UniProt=E9PYE7|association_with_transcript=16bp_to_ENSMUST00000171658_5end|description=CAGE_peak_2_at_Slx4_5end|id=chr16:4003721..4003735,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004923!1.87e-07!24|ontology_enrichment_uberon_v019_2=UBERON:0000160,3.05e-09,31;UBERON:0004923,1.12e-07,24;UBERON:0005409,3.03e-07,47|phase1_expression=2.40223270657191,8.02643437570531,7.73498706962211,17.845388467103,12.0214975187123,3.18970616632591,2.80335168714631,1.80772652818207,1.267098499365,1.63845168425395,0.513653904676515,0.797721589953364,2.05440875917447,2.18551006047494,3.33109761815663,3.84703008040669,3.49780939064073,1.73504190947031,2.60517423850904,2.54633791078818,6.37824676133023,1.39007331681239,1.04479915655574,3.83981814704176,3.21172993494038,2.8711598205751,5.59990595006797,3.01659725760245,3.42042155021473,5.79669298447841,1.10865255327652,1.90509202037889,0.61506478758457,0,3.17736781726402,0.498703936075477,1.83752420636132,1.67412652294763,1.5626706890476,2.09409497589519,1.17646297606203,1.36609096991689,1.45653105909346,2.26614272356039,1.52065396829272,1.65192076945513,0.782391344348039,0.65407546914134,0.439372365468944,1.36100929351998,0.839918529752175,1.43752564364972,2.18117387875057,0.725362142011344,1.34437519656986,1.54355661621568,0.286533439938757,1.03134418455488,2.63011399117477,2.11596391708813,1.26766280701236,0.677689064138264,1.77858959222228,0.449949858640699,0.988866362566974,0.7104801149461,0.599200221036809,1.15265491596466,2.17748185847803,1.08004750665353,1.26194976810829,0.856952953211411,1.32521124570968,1.10241719293459,1.72521847832825,1.83843757322004,0,1.0214987046815,0.307213066512487,1.97829431595291,2.65314166446988,3.12548022334056,0.837548997004143,0.56276261003168,0.763991238884051,1.76777151284201,1.56608848879013,1.1183966749518,0.681535739998656,0.604572480854284,1.44932244350839,0,2.719885334831,0.539703191637817,0,1.34408066129201,1.68533304158102,1.1930122580464,0.519572009205738,1.41335829804136,0.281686839553361,1.28326477414318,0,0,0.432982082022428,0.760079596425296,0,2.16949371466214,2.07150306917737,2.3750742250372,2.08182392119363,0.608930956624282,1.61430848079241,0.904335843315735,0.940709657085638,1.0053327306374,1.48316980640624,1.01219549843938,1.76922110389975,0.808834249737046,1.98757366614354,2.42437626567611,3.72783522436244,0.585561594023094,2.51336048176146,2.04365644166873,0.599075622529601,1.19980546198682,1.01656181658452,1.9472783122627,1.37250180845588,2.89005009859588,0.521472960576829,1.53429274398198,0.62336413367868,1.46017136760982,0.712875546952214,1.8661045591514,0.758168275301024,1.47309299120532,1.56144531555244,1.60931473103431,0.900310649026746,1.80845781402858,2.10913147369116,1.66547836370305,1.3118241438362,1.81092359517311,2.37124792226126,2.45837904218165,3.51902248327898,2.19195732427575,1.94633074457919,1.39300866608867,1.4404749548556,1.59227413454795,1.40442637462647,0.257347907114715,1.13665399758237,1.44988040774851,0.469052119962192,0.36012412292203,1.89395788468168,0.590292695242212,0.925602677324269,0.465067889500816,0.268273401399619,0.817357396570186,0.658239399653922,0.985004784474571,0.324275238183423,0.438599962275997,0.658650345873152,0.805238512562231,0.630869845692382,2.16099685996497,4.29544417878937,5.02456076660734,1.06644125267617,1.16118335930219,1.9330119198314,1.21010114774006,2.44615848229357,3.04361001780095,1.89811624617805,2.14108641141214,3.01602250560323,2.58643413653496,2.33956904542944,6.29173586057955,2.80979464837102,4.18196673834171,0.758671603812327,2.05647322697512,2.25415471346161,2.03651327845314,1.35766741017338,2.38461787627083,2.46622494784603,2.95220295959204,4.08196692387575,4.44229790118482,1.48226313543574,2.66952169145751,1.96558995113203,2.47348323623339,2.84004169943904,1.4470629585145,2.29163266603278,2.01387296215567,1.13494658742525,0.823684239564244,1.43768206527355,0.744281895337007,2.49630138491648,1.26289438973556,1.97337154874103,0,1.47802552133284,2.27389694124582,1.79261474086228,1.18821560042632,1.40814148973101,1.50755631697634,1.19021820443007,0.585400943573396,1.57635144106191,0.8858587585951,0.478364305972461,0.491589944147214,1.38147985492716,1.15719246865209,1.50791283939272,0.54390568381871,0.491764273019036,1.37968373152366,1.44495530989013,1.28932855251423,0.819674726883377,0.504941854408746,1.26203287766503,2.34263246577983,0.861693590931196,1.67278158566786,2.00518806674155,0.566153061577665,0.809621403349789,0.876767573733936,0.790575555893047,0,1.84522110770749,0.712262414669021,0.81443479676788,1.81467135269789,0,1.69946445308487,0.604647113929502,0.754420319023592,1.18120757152309,1.22974059177571,0.775284879504663,0.363533729477506,1.06949213515416,1.26414703174326,2.10837217149998,1.03135543248187,1.36175842301515,1.62054984628179,1.81102157295856,1.28602221018955,2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| ||
|EntrezGene=52864 | |||
|HGNC= | |||
|MCL_coexpression_id=616 | |||
|UniProt=E9PYE7 | |||
|association_with_transcript=16bp_to_ENSMUST00000171658_5end | |||
|description=CAGE_peak_2_at_Slx4_5end | |||
|id=chr16:4003721..4003735,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004923!1.87e-07!24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,3.05e-09,31;UBERON:0004923,1.12e-07,24;UBERON:0005409,3.03e-07,47 | |||
|phase1_expression=2.40223270657191,8.02643437570531,7.73498706962211,17.845388467103,12.0214975187123,3.18970616632591,2.80335168714631,1.80772652818207,1.267098499365,1.63845168425395,0.513653904676515,0.797721589953364,2.05440875917447,2.18551006047494,3.33109761815663,3.84703008040669,3.49780939064073,1.73504190947031,2.60517423850904,2.54633791078818,6.37824676133023,1.39007331681239,1.04479915655574,3.83981814704176,3.21172993494038,2.8711598205751,5.59990595006797,3.01659725760245,3.42042155021473,5.79669298447841,1.10865255327652,1.90509202037889,0.61506478758457,0,3.17736781726402,0.498703936075477,1.83752420636132,1.67412652294763,1.5626706890476,2.09409497589519,1.17646297606203,1.36609096991689,1.45653105909346,2.26614272356039,1.52065396829272,1.65192076945513,0.782391344348039,0.65407546914134,0.439372365468944,1.36100929351998,0.839918529752175,1.43752564364972,2.18117387875057,0.725362142011344,1.34437519656986,1.54355661621568,0.286533439938757,1.03134418455488,2.63011399117477,2.11596391708813,1.26766280701236,0.677689064138264,1.77858959222228,0.449949858640699,0.988866362566974,0.7104801149461,0.599200221036809,1.15265491596466,2.17748185847803,1.08004750665353,1.26194976810829,0.856952953211411,1.32521124570968,1.10241719293459,1.72521847832825,1.83843757322004,0,1.0214987046815,0.307213066512487,1.97829431595291,2.65314166446988,3.12548022334056,0.837548997004143,0.56276261003168,0.763991238884051,1.76777151284201,1.56608848879013,1.1183966749518,0.681535739998656,0.604572480854284,1.44932244350839,0,2.719885334831,0.539703191637817,0,1.34408066129201,1.68533304158102,1.1930122580464,0.519572009205738,1.41335829804136,0.281686839553361,1.28326477414318,0,0,0.432982082022428,0.760079596425296,0,2.16949371466214,2.07150306917737,2.3750742250372,2.08182392119363,0.608930956624282,1.61430848079241,0.904335843315735,0.940709657085638,1.0053327306374,1.48316980640624,1.01219549843938,1.76922110389975,0.808834249737046,1.98757366614354,2.42437626567611,3.72783522436244,0.585561594023094,2.51336048176146,2.04365644166873,0.599075622529601,1.19980546198682,1.01656181658452,1.9472783122627,1.37250180845588,2.89005009859588,0.521472960576829,1.53429274398198,0.62336413367868,1.46017136760982,0.712875546952214,1.8661045591514,0.758168275301024,1.47309299120532,1.56144531555244,1.60931473103431,0.900310649026746,1.80845781402858,2.10913147369116,1.66547836370305,1.3118241438362,1.81092359517311,2.37124792226126,2.45837904218165,3.51902248327898,2.19195732427575,1.94633074457919,1.39300866608867,1.4404749548556,1.59227413454795,1.40442637462647,0.257347907114715,1.13665399758237,1.44988040774851,0.469052119962192,0.36012412292203,1.89395788468168,0.590292695242212,0.925602677324269,0.465067889500816,0.268273401399619,0.817357396570186,0.658239399653922,0.985004784474571,0.324275238183423,0.438599962275997,0.658650345873152,0.805238512562231,0.630869845692382,2.16099685996497,4.29544417878937,5.02456076660734,1.06644125267617,1.16118335930219,1.9330119198314,1.21010114774006,2.44615848229357,3.04361001780095,1.89811624617805,2.14108641141214,3.01602250560323,2.58643413653496,2.33956904542944,6.29173586057955,2.80979464837102,4.18196673834171,0.758671603812327,2.05647322697512,2.25415471346161,2.03651327845314,1.35766741017338,2.38461787627083,2.46622494784603,2.95220295959204,4.08196692387575,4.44229790118482,1.48226313543574,2.66952169145751,1.96558995113203,2.47348323623339,2.84004169943904,1.4470629585145,2.29163266603278,2.01387296215567,1.13494658742525,0.823684239564244,1.43768206527355,0.744281895337007,2.49630138491648,1.26289438973556,1.97337154874103,0,1.47802552133284,2.27389694124582,1.79261474086228,1.18821560042632,1.40814148973101,1.50755631697634,1.19021820443007,0.585400943573396,1.57635144106191,0.8858587585951,0.478364305972461,0.491589944147214,1.38147985492716,1.15719246865209,1.50791283939272,0.54390568381871,0.491764273019036,1.37968373152366,1.44495530989013,1.28932855251423,0.819674726883377,0.504941854408746,1.26203287766503,2.34263246577983,0.861693590931196,1.67278158566786,2.00518806674155,0.566153061577665,0.809621403349789,0.876767573733936,0.790575555893047,0,1.84522110770749,0.712262414669021,0.81443479676788,1.81467135269789,0,1.69946445308487,0.604647113929502,0.754420319023592,1.18120757152309,1.22974059177571,0.775284879504663,0.363533729477506,1.06949213515416,1.26414703174326,2.10837217149998,1.03135543248187,1.36175842301515,1.62054984628179,1.81102157295856,1.28602221018955,2.30542303734956,1.96205699362278,2.46823530903181,1.2178597964584,2.3467170806371,1.69465656691056,1.10264199027481,0.65954501176592,0.645857706783622,1.14594557363496,1.07435109602823,0.492422699235184,1.7488850197791,0.927126510052548,3.07567585436135,0.619160603889667,2.40752885580625,2.63715839806567,2.32380187125743,2.74533807847827,1.69978429993855,0.419854356970974,0.967399816630967,0.954670618015114,2.84702394223022,2.23651413839534,1.29606408986162,0.627264888043406,1.528537946223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| |||
|short_description=p2@Slx4 | |||
}} | |||
Revision as of 12:39, 13 September 2013
| Short description: | p2@Slx4 |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_2_at_Slx4_5end |
| Coexpression cluster: | MCL_coexpression_mm9:616 |
| Association with transcript: | 16bp_to_ENSMUST00000171658_5end |
| EntrezGene: | Slx4 |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| intestine | 3.05e-09 | 31 |
| organ component layer | 1.12e-07 | 24 |
| gastrointestinal system | 3.03e-07 | 47 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
