FFCP PHASE1:Hg19::chr5:121412820..121412842,-: Difference between revisions
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{{FFCP | 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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=4015 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6664 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=-14bp_to_uc011cwk.1_5end | |||
|coexpression_cluster_id=C4452 | |||
|description=CAGE_peak_6_at_LOX_5end | |||
|id=chr5:121412820..121412842,- | |||
|ontology_enrichment_celltype=CL:0000055!1.60e-50!180;CL:0000057!1.28e-27!75;CL:0000222!4.58e-24!119;CL:0000144!4.01e-18!625;CL:0000680!6.58e-17!57;CL:0000056!6.58e-17!57;CL:0000355!6.58e-17!57;CL:0002371!1.42e-16!591;CL:0000187!9.43e-16!54;CL:0000220!1.13e-15!246;CL:0002321!4.19e-15!248;CL:0000183!4.49e-15!59;CL:0000012!1.92e-14!682;CL:0000393!3.10e-14!60;CL:0000211!3.10e-14!60;CL:0000548!5.98e-14!679;CL:0000004!5.98e-14!679;CL:0000255!5.98e-14!679;CL:0000192!2.93e-13!42;CL:0000514!2.93e-13!42;CL:0002620!1.33e-11!23;CL:0000359!2.24e-11!32;CL:0000048!1.07e-08!430;CL:0000213!5.16e-08!57;CL:0000215!5.16e-08!57;CL:0000723!9.52e-08!436;CL:0000034!1.64e-07!444;CL:0002334!1.67e-07!12;CL:0000003!2.60e-07!722;CL:0002139!8.07e-07!24 | |||
|ontology_enrichment_celltype_v019=CL:0000057;9.04e-13;73!CL:0000359;8.99e-12;32!CL:0002620;1.68e-11;23!CL:0000192;1.51e-10;43!CL:0000187;1.40e-09;55!CL:0002320;8.87e-09;188!CL:0000393;3.91e-08;61!CL:0000211;3.91e-08;61!CL:0002334;6.71e-08;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.28e-30,76;CL:0000222,1.05e-23,121;CL:0000680,4.81e-19,58;CL:0000056,4.81e-19,58;CL:0000355,4.81e-19,58;CL:0000187,1.10e-17,55;CL:0000048,1.22e-16,427;CL:0000723,1.45e-15,433;CL:0000393,6.79e-15,61;CL:0000211,6.79e-15,61;CL:0000034,8.13e-15,441;CL:0000192,1.05e-14,43;CL:0000514,1.05e-14,43;CL:0000359,1.33e-12,32;CL:0002321,2.25e-12,250;CL:0002620,1.72e-11,23;CL:0002334,6.65e-08,12 | |||
|ontology_enrichment_development_v019=CL:0000514;1.51e-10;43!CL:0000355;4.51e-10;58!CL:0000222;2.34e-07;121 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:2394;8.14e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,8.55e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0002049!5.28e-20!79;UBERON:0007798!5.28e-20!79;UBERON:0000914!4.20e-19!83;UBERON:0002329!4.20e-19!83;UBERON:0003077!4.20e-19!83;UBERON:0003059!4.20e-19!83;UBERON:0007282!4.20e-19!83;UBERON:0009618!4.20e-19!83;UBERON:0007285!4.20e-19!83;UBERON:0004290!2.30e-17!70;UBERON:0000055!7.97e-16!69;UBERON:0004872!1.28e-15!84;UBERON:0005256!1.71e-15!143;UBERON:0001134!7.81e-15!61;UBERON:0002036!7.81e-15!61;UBERON:0003082!7.81e-15!61;UBERON:0004535!8.04e-15!110;UBERON:0002385!4.76e-14!63;UBERON:0001015!4.76e-14!63;UBERON:0000383!4.76e-14!63;UBERON:0000486!5.39e-14!82;UBERON:0001009!6.87e-14!113;UBERON:0001981!1.02e-13!60;UBERON:0007500!1.02e-13!60;UBERON:0004537!1.02e-13!60;UBERON:0006965!1.02e-13!60;UBERON:0000490!1.76e-13!138;UBERON:0003914!4.59e-12!118;UBERON:0001637!4.74e-12!42;UBERON:0003509!4.74e-12!42;UBERON:0004572!4.74e-12!42;UBERON:0002100!1.96e-11!216;UBERON:0004573!1.53e-09!33;UBERON:0004571!1.53e-09!33;UBERON:0000475!1.22e-08!365;UBERON:0003102!1.31e-08!95;UBERON:0002199!1.42e-08!45;UBERON:0002416!1.42e-08!45;UBERON:0002097!1.18e-07!40;UBERON:0000947!4.87e-07!21;UBERON:0010191!4.87e-07!21 | |||
|ontology_enrichment_uberon_v019=UBERON:0002049;1.27e-09;75!UBERON:0007798;1.27e-09;75!UBERON:0002384;3.03e-09;198!UBERON:0007500;3.80e-09;56!UBERON:0001981;3.80e-09;56!UBERON:0004537;3.80e-09;56!UBERON:0004573;1.81e-08;33!UBERON:0004571;1.81e-08;33!UBERON:0000055;1.94e-08;65!UBERON:0001637;2.69e-08;42!UBERON:0003509;2.69e-08;42!UBERON:0004572;2.69e-08;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002049,1.14e-19,78;UBERON:0007798,1.14e-19,78;UBERON:0002329,4.91e-19,71;UBERON:0003059,4.91e-19,71;UBERON:0007282,4.91e-19,71;UBERON:0004290,4.91e-19,71;UBERON:0009618,4.91e-19,71;UBERON:0007503,7.53e-19,78;UBERON:0007524,8.82e-19,73;UBERON:0003077,1.82e-18,72;UBERON:0007285,1.82e-18,72;UBERON:0001134,1.44e-16,62;UBERON:0002036,1.44e-16,62;UBERON:0003082,1.44e-16,62;UBERON:0000490,2.63e-16,148;UBERON:0000055,1.31e-15,68;UBERON:0002385,1.83e-15,64;UBERON:0001015,1.83e-15,64;UBERON:0000383,1.83e-15,64;UBERON:0000486,2.27e-15,83;UBERON:0004535,3.07e-15,109;UBERON:0001009,3.58e-14,112;UBERON:0004872,1.39e-13,83;UBERON:0007500,1.45e-13,59;UBERON:0001981,1.45e-13,59;UBERON:0004537,1.45e-13,59;UBERON:0006965,1.45e-13,59;UBERON:0005256,4.50e-12,122;UBERON:0001637,1.01e-11,42;UBERON:0003509,1.01e-11,42;UBERON:0004572,1.01e-11,42;UBERON:0003914,1.68e-10,117;UBERON:0003104,6.39e-10,160;UBERON:0009142,6.39e-10,160;UBERON:0004573,2.28e-09,33;UBERON:0004571,2.28e-09,33;UBERON:0002199,2.00e-08,46;UBERON:0002416,2.00e-08,46;UBERON:0002097,3.90e-08,41;UBERON:0002100,1.52e-07,199;UBERON:0000119,6.13e-07,309;UBERON:0000947,7.21e-07,21;UBERON:0010191,7.21e-07,21 | |||
|phase1_expression=10.5373459976923,4.71021152560163,11.1353979235817,7.00513088471913,4.02264984984559,3.48935409640147,2.53299878168311,0.631719873426831,0.522371256399677,1.72013755551056,0.697801167972428,1.09220686065086,0.527533956456907,2.47532705920093,4.30816588446291,2.6893005858071,3.61616716814386,2.92124036154949,2.92759679274304,5.66356867153224,5.30401797235058,2.19418305034661,4.57977579409691,2.46373965131192,4.3939923858181,0,0,0,0,0,0,0,0,0,0,0,2.64240395401362,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32171328579026,1.68152568894461,0.526768169550154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.87613732627923,16.7675214925909,5.88167784480239,7.22878304769133,10.0267582127178,6.37324683427624,9.54343136461319,10.705967146658,5.86115866417221,7.9822583086523,7.02678285545008,0,0,0,0,0,0,0,0.571994910780128,0,3.9752481473341,3.4409383804245,3.12426451446835,2.82653970962005,0.838998872419812,2.47606237746061,1.25396979922086,8.0109195342492,7.82685777910763,18.0749130892922,10.876391561947,7.60272105718513,10.9827925896676,2.57364156242108,0.81014194788176,7.41187744757862,2.91888184414021,6.53146586803269,4.5994991239765,0,2.19842092716489,0,0,0,21.3697939228987,11.7766375848059,14.6974190702673,5.73673241497627,3.90135220418193,2.24271040056923,3.20246987189115,6.90669135568048,4.97937656639626,5.6578482269269,2.28846664358842,2.4217188423189,2.88087962239999,4.92075006850973,0.624320153660641,1.71141546463335,4.63290909710583,9.39475989150119,12.302343771978,12.6405726032024,3.0623125688234,2.57952066354713,1.96318984233954,16.6320400019487,17.308685049499,5.46096817162816,4.31170885089743,1.5150250255866,2.75260743718321,7.75779523355712,17.1201272143527,13.7919508109559,14.2726155961267,9.1880068359617,13.4542226766646,17.0845911054854,11.4443226626163,11.1033705551229,13.0876712132817,11.5938243020533,13.7726473685376,11.6455669246474,22.8976962128817,10.3497847440087,15.5564328705486,4.0411514204703,17.3954700333141,16.1203357164224,7.29110546935097,0,0,0.286804595389004,0,0,0.116193942869518,0,0.252320850875628,0,1.56449532329816,5.14592750554308,2.76269842704961,16.2528774811193,5.77503585335668,0.354920400119532,0,0,0.110293972732394,0,0,0.134831308160164,0,0,0,8.41450642820675,0.8231480226628,2.94017422771084,0,0,0,0,0,6.86271241194102,0,0,0,0,2.93227474779292,2.07986957055916,8.6598805215164,1.97081688457631,36.5141039073405,4.33099343283221,0.925971025153221,4.75635380586496,0,0,0,0,0,0,0.503946384596579,0.425325291727159,1.07470227243418,0.290633938513962,3.06706143332169,0,0,0,0,0,0.126995788584338,0.381988425558278,0,1.71072446022705,1.43958489784653,2.70308752059526,1.14330573052231,5.83081638595876,2.1798003441664,11.4407725880682,39.4278733061222,0,4.22651376278,15.1584726453376,4.16029747645464,3.60090323966999,0,2.1313774321288,6.71996570193294,0,6.58592269424615,2.93162565864362,4.6200953336531,1.58390374586686,5.12446941001296,8.71533458600294,4.09889263846434,0,0,0,16.2944901734276,5.7430967917057,1.42636905040718,14.4781306667579,2.4657158706046,6.26713371339634,0,0,0,0,1.52456774533478,2.60279707715243,2.31986643833309,0.837581326671744,0.637938751653163,0,0,0,2.20844685094452,2.50085260529839,5.15403545029498,7.90289273817067,7.13715955188647,7.7274183366628,8.43418187947535,9.32932909155929,18.1926003244788,6.2083842775503,17.2698655619213,11.2465192810439,6.25562024170197,0.391602314925481,0,0,0,0,0.606255142892519,3.32870879020994,0.30239029332968,17.8637621629519,16.2669691685346,10.6650835884568,14.7360021644056,18.933168215468,12.8683136914886,8.90508398669946,8.17311377154074,10.2985800681614,7.30931688522901,0.519254429183621,5.57809816607804,0.362578348774867,1.40354529212299,0.0920809889358963,7.23331023437022,11.1075612484097,3.67148361886388,2.25599806453706,1.92538342761037,0.784349769176855,0,4.01096189792928,1.13733384070897,0.850468526382578,8.42072072798343,1.54227252690289,1.62567862526312,2.00675909541941,1.01950509218015,0,0.671624264166535,0,0,0.256450125116389,0.984043937099117,8.45983826127188,0.412164046590889,0.54941678891006,0.660075999364704,0,0.650060246036521,3.21367859688319,1.45006077438183,1.69453478826109,1.68854042198743,2.75673144969061,3.54486808065303,2.0302337147992,1.61930592090592,6.23224249527162,0.330569830721956,0.768760269460425,0.127612712494584,0.30347334256665,14.8750575775131,12.5924938732256,2.0911118104818,3.08033580176089,4.7907542728532,6.08953094452551,2.40921484835096,8.30124343103549,10.4204343420707,7.59310619324942,7.81583795087682,2.55897791311334,7.27496279657665,2.86382923133343,3.13979456079692,7.55464321849922,3.56898138656871,4.47687128913608,4.65019707618627,4.75530963519025,3.37006764991185,0.975267478179181,2.68084838594413,1.05650146756755,5.05049672209547,5.65621727814851,1.13008116620243,0.551365343546124,3.98063385144732,6.13831239355268,2.31510213706675,1.31178950409327,9.33387734028438,6.196469961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| |||
|short_description=p6@LOX | |||
}} |
Revision as of 12:52, 13 September 2013
Short description: | p6@LOX |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_LOX_5end |
Coexpression cluster: | C4452_Lens_Mesenchymal_osteoclastoma_Preadipocyte_basal_Fibroblast_epithelioid |
Association with transcript: | -14bp_to_uc011cwk.1_5end |
EntrezGene: | LOX |
HGNC: | 6664 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.28e-30 | 76 |
mesodermal cell | 1.05e-23 | 121 |
muscle precursor cell | 4.81e-19 | 58 |
myoblast | 4.81e-19 | 58 |
multi-potent skeletal muscle stem cell | 4.81e-19 | 58 |
muscle cell | 1.10e-17 | 55 |
multi fate stem cell | 1.22e-16 | 427 |
somatic stem cell | 1.45e-15 | 433 |
electrically responsive cell | 6.79e-15 | 61 |
electrically active cell | 6.79e-15 | 61 |
stem cell | 8.13e-15 | 441 |
smooth muscle cell | 1.05e-14 | 43 |
smooth muscle myoblast | 1.05e-14 | 43 |
vascular associated smooth muscle cell | 1.33e-12 | 32 |
embryonic cell | 2.25e-12 | 250 |
skin fibroblast | 1.72e-11 | 23 |
preadipocyte | 6.65e-08 | 12 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 8.55e-07 | 14 |
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