FFCP PHASE1:Hg19::chr5:134369177..134369188,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=|TSSclassifier=S|UniProt=|association_with_transcript=45bp_to_ENST00000505828_5end|description=CAGE_peak_2_at_ENST00000505828_5end|id=chr5:134369177..134369188,+|ontology_enrichment_celltype=CL:0002504!1.95e-07!3;CL:1000279!1.95e-07!3;CL:1000280!1.95e-07!3;CL:0000223!3.27e-07!59|ontology_enrichment_celltype_v019=CL:1000487;9.87e-18;2!CL:0002622;2.19e-12;3!CL:0002504;2.74e-12;3!CL:1000279;2.74e-12;3!CL:1000280;2.74e-12;3|ontology_enrichment_celltype_v019_2=CL:1000487,9.07e-18,2;CL:0002622,2.31e-12,3;CL:0002504,2.89e-12,3;CL:1000279,2.89e-12,3;CL:1000280,2.89e-12,3|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:305!4.03e-09!106;DOID:0050687!3.44e-07!143|ontology_enrichment_disease_v019=DOID:3307;8.77e-67;2!DOID:3095;4.86e-07;22!DOID:2994;4.86e-07;22|ontology_enrichment_disease_v019_2=DOID:3307,7.41e-67,2;DOID:3095,4.79e-07,22;DOID:2994,4.79e-07,22|ontology_enrichment_uberon=UBERON:0001007!6.55e-21!155;UBERON:0001555!6.55e-21!155;UBERON:0007026!6.55e-21!155;UBERON:0004921!1.12e-20!129;UBERON:0004185!1.12e-20!129;UBERON:0004119!8.95e-20!169;UBERON:0000925!8.95e-20!169;UBERON:0006595!8.95e-20!169;UBERON:0000077!6.63e-15!130;UBERON:0003104!6.61e-12!238;UBERON:0009142!6.61e-12!238;UBERON:0000161!1.01e-11!35;UBERON:0003929!3.59e-10!54;UBERON:0000162!3.72e-10!14;UBERON:0001353!3.72e-10!14;UBERON:0000163!3.72e-10!14;UBERON:0006866!3.72e-10!14;UBERON:0000164!3.72e-10!14;UBERON:0000931!3.72e-10!14;UBERON:0001041!9.45e-10!98;UBERON:0004122!2.41e-09!15;UBERON:0000481!3.21e-09!347;UBERON:0005911!1.03e-08!82;UBERON:0001046!1.43e-08!19;UBERON:0001004!1.92e-08!72;UBERON:0002367!3.40e-08!11;UBERON:0010147!3.40e-08!11;UBERON:0009846!3.40e-08!11;UBERON:0003353!3.40e-08!11;UBERON:0004902!3.40e-08!11;UBERON:0003820!3.40e-08!11;UBERON:0009847!3.40e-08!11;UBERON:0000065!1.33e-07!53;UBERON:0000072!2.06e-07!46;UBERON:0003937!2.09e-07!12;UBERON:0005399!2.09e-07!12;UBERON:0001737!3.02e-07!9;UBERON:0000490!5.55e-07!138|ontology_enrichment_uberon_v019=UBERON:0002367;5.10e-13;11!UBERON:0010147;5.10e-13;11!UBERON:0003937;5.08e-12;12!UBERON:0005399;5.08e-12;12!UBERON:0003101;5.40e-07;22!UBERON:0000079;5.40e-07;22|ontology_enrichment_uberon_v019_2=UBERON:0002367,5.10e-13,11;UBERON:0010147,5.10e-13,11;UBERON:0009846,5.10e-13,11;UBERON:0003353,5.10e-13,11;UBERON:0004902,5.10e-13,11;UBERON:0003820,5.10e-13,11;UBERON:0009847,5.10e-13,11;UBERON:0003937,5.08e-12,12;UBERON:0005399,5.08e-12,12;UBERON:0000162,1.90e-10,14;UBERON:0001353,1.90e-10,14;UBERON:0000163,1.90e-10,14;UBERON:0006866,1.90e-10,14;UBERON:0000164,1.90e-10,14;UBERON:0000931,1.90e-10,14;UBERON:0004122,8.10e-10,15;UBERON:0001046,5.94e-08,19;UBERON:0003101,5.40e-07,22;UBERON:0000079,5.40e-07,22|phase1_expression=0,0,0,0,0,0,0,0,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30120591877825,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.264818361626438,0,0,0,0,0,0.311211035399766,0,0,0,0,0,0,0,0,0.117434498643765,0,0,0,0,0,0,0.494533858557114,0,0,0,0,0,0,0,0.300476117813194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0,0,0,0,0,0,0,0,0,0,0,0,0,0.473227200159376,0,0,0.220587945464788,0,0.237270619111097,0.269662616320329,0.196221465125346,0.38474715694639,0,0,0,0,0,0,0,0,0.368965315629341,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0.531876233169741,0,0,0,0,0.285955987316295,0.542621605391443,0,0,0.355391948742546,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173767228936166,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.362578348774867,0,0.0920809889358963,0.68888668898764,0,3.40923478894503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107420244868274,0,0,0,0,0,0.127612712494584,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.15846949099978,0.823611089208164,0.471249609382746,0,0,0,0.48763373908959,0,0,0.409499734223957,2.2624869112594,0,0,0,0,0,0,0,0.30982349809975,0.281695602532241,0,0.0982490410131212,0.35667105148125,0,0,0,0,0.349934720244983,0.0962221127255121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.962479855263359,0,0,0,0,0,0,0,0,0,0,0,0.313359791546046,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.844501632511974,0.19924798825107,0,0,0,0,0,0.0898683511473268,0.716084698702437,0,0.197286811273867,0,0,0,0,0,0,0.0874599999961957,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10893846351899,0.139423744278603,0,0,0,0,0,0,0,0,0,0,0.166211681900156,0,0,0,0,0,0,0,0,0.216388639742091,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20990716048664,0,0.063186579628488,0.150323419414493,0,0,0,0,0,0,0,0.173559738335131,0.0979923974143777,0,0,0,0.774050650312681,0.219267951258557,0.24634637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| ||
|DPIdataset=robustDPI | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC= | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=45bp_to_ENST00000505828_5end | |||
|description=CAGE_peak_2_at_ENST00000505828_5end | |||
|id=chr5:134369177..134369188,+ | |||
|ontology_enrichment_celltype=CL:0002504!1.95e-07!3;CL:1000279!1.95e-07!3;CL:1000280!1.95e-07!3;CL:0000223!3.27e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:1000487;9.87e-18;2!CL:0002622;2.19e-12;3!CL:0002504;2.74e-12;3!CL:1000279;2.74e-12;3!CL:1000280;2.74e-12;3 | |||
|ontology_enrichment_celltype_v019_2=CL:1000487,9.07e-18,2;CL:0002622,2.31e-12,3;CL:0002504,2.89e-12,3;CL:1000279,2.89e-12,3;CL:1000280,2.89e-12,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!4.03e-09!106;DOID:0050687!3.44e-07!143 | |||
|ontology_enrichment_disease_v019=DOID:3307;8.77e-67;2!DOID:3095;4.86e-07;22!DOID:2994;4.86e-07;22 | |||
|ontology_enrichment_disease_v019_2=DOID:3307,7.41e-67,2;DOID:3095,4.79e-07,22;DOID:2994,4.79e-07,22 | |||
|ontology_enrichment_uberon=UBERON:0001007!6.55e-21!155;UBERON:0001555!6.55e-21!155;UBERON:0007026!6.55e-21!155;UBERON:0004921!1.12e-20!129;UBERON:0004185!1.12e-20!129;UBERON:0004119!8.95e-20!169;UBERON:0000925!8.95e-20!169;UBERON:0006595!8.95e-20!169;UBERON:0000077!6.63e-15!130;UBERON:0003104!6.61e-12!238;UBERON:0009142!6.61e-12!238;UBERON:0000161!1.01e-11!35;UBERON:0003929!3.59e-10!54;UBERON:0000162!3.72e-10!14;UBERON:0001353!3.72e-10!14;UBERON:0000163!3.72e-10!14;UBERON:0006866!3.72e-10!14;UBERON:0000164!3.72e-10!14;UBERON:0000931!3.72e-10!14;UBERON:0001041!9.45e-10!98;UBERON:0004122!2.41e-09!15;UBERON:0000481!3.21e-09!347;UBERON:0005911!1.03e-08!82;UBERON:0001046!1.43e-08!19;UBERON:0001004!1.92e-08!72;UBERON:0002367!3.40e-08!11;UBERON:0010147!3.40e-08!11;UBERON:0009846!3.40e-08!11;UBERON:0003353!3.40e-08!11;UBERON:0004902!3.40e-08!11;UBERON:0003820!3.40e-08!11;UBERON:0009847!3.40e-08!11;UBERON:0000065!1.33e-07!53;UBERON:0000072!2.06e-07!46;UBERON:0003937!2.09e-07!12;UBERON:0005399!2.09e-07!12;UBERON:0001737!3.02e-07!9;UBERON:0000490!5.55e-07!138 | |||
|ontology_enrichment_uberon_v019=UBERON:0002367;5.10e-13;11!UBERON:0010147;5.10e-13;11!UBERON:0003937;5.08e-12;12!UBERON:0005399;5.08e-12;12!UBERON:0003101;5.40e-07;22!UBERON:0000079;5.40e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002367,5.10e-13,11;UBERON:0010147,5.10e-13,11;UBERON:0009846,5.10e-13,11;UBERON:0003353,5.10e-13,11;UBERON:0004902,5.10e-13,11;UBERON:0003820,5.10e-13,11;UBERON:0009847,5.10e-13,11;UBERON:0003937,5.08e-12,12;UBERON:0005399,5.08e-12,12;UBERON:0000162,1.90e-10,14;UBERON:0001353,1.90e-10,14;UBERON:0000163,1.90e-10,14;UBERON:0006866,1.90e-10,14;UBERON:0000164,1.90e-10,14;UBERON:0000931,1.90e-10,14;UBERON:0004122,8.10e-10,15;UBERON:0001046,5.94e-08,19;UBERON:0003101,5.40e-07,22;UBERON:0000079,5.40e-07,22 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30120591877825,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.264818361626438,0,0,0,0,0,0.311211035399766,0,0,0,0,0,0,0,0,0.117434498643765,0,0,0,0,0,0,0.494533858557114,0,0,0,0,0,0,0,0.300476117813194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0,0,0,0,0,0,0,0,0,0,0,0,0,0.473227200159376,0,0,0.220587945464788,0,0.237270619111097,0.269662616320329,0.196221465125346,0.38474715694639,0,0,0,0,0,0,0,0,0.368965315629341,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0.531876233169741,0,0,0,0,0.285955987316295,0.542621605391443,0,0,0.355391948742546,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173767228936166,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.362578348774867,0,0.0920809889358963,0.68888668898764,0,3.40923478894503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107420244868274,0,0,0,0,0,0.127612712494584,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.15846949099978,0.823611089208164,0.471249609382746,0,0,0,0.48763373908959,0,0,0.409499734223957,2.2624869112594,0,0,0,0,0,0,0,0.30982349809975,0.281695602532241,0,0.0982490410131212,0.35667105148125,0,0,0,0,0.349934720244983,0.0962221127255121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.962479855263359,0,0,0,0,0,0,0,0,0,0,0,0.313359791546046,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.844501632511974,0.19924798825107,0,0,0,0,0,0.0898683511473268,0.716084698702437,0,0.197286811273867,0,0,0,0,0,0,0.0874599999961957,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10893846351899,0.139423744278603,0,0,0,0,0,0,0,0,0,0,0.166211681900156,0,0,0,0,0,0,0,0,0.216388639742091,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20990716048664,0,0.063186579628488,0.150323419414493,0,0,0,0,0,0,0,0.173559738335131,0.0979923974143777,0,0,0,0.774050650312681,0.219267951258557,0.246346371159628,0,0,0,0,0,0,0,0,0.213452994739353,0,0,0.114536596165916,0.686379991447858,0,0,0.235694034616795,0,0,0.203996435272644,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.551482276150566,0.247247575143499,0.202210631562555,0.0984274815147488,0,0,0,0,0,0,0,0,0,0,0,0,0.633602019116439,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.468334905806882,0,0,0,0,0,0.251567901752575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398095888698616,0,0,0,0,0,0,0,0,0,0,0,0.308801447160972,0.877136198314828,0.176689145945881,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139879507719444,0,0,0,0,0,0.169732529954025,0,0,0,0,0,0,0,0.918736432059601,0,0,0,0,0,0,0,0,0,0,0.183428598521679,0.115525666150338,0,0,0.397832444232549,0,0,0,0,0.163771917510097,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227662191351298,0,0,0,0,0,0,0,0.156986185701028,0,0,0,0,0,0,0,0,0,4.81026818838152,0,0,0.691259661814092,0.430227358820278,0,0,0,0,0,0,0,0,0,0.647428837187895,0.205325613712494,0,0,0,0,0,0,0,0.150962843566674,0.0771741581079447,0,0,0.245148321753905,0,0,0,0,0,0,0,0,0.178553938605658,0.352894871715692,0.0802413666891683,0,0,0,0,0,0,0.5290268405154,0.371995018166751,0.924351257262837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217716747896961,0,0.0673520530145875,0.502055437748735,0.332660356546013,0,0,3.8614456457388,0.0898252021065869,0,0,0.406896178315738,0.665756774185513,0,0 | |||
|short_description=p2@ENST00000505828 | |||
}} |
Revision as of 13:15, 13 September 2013
Short description: | p2@ENST00000505828 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_ENST00000505828_5end |
Coexpression cluster: | NA |
Association with transcript: | 45bp_to_ENST00000505828_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of prostate | 9.07e-18 | 2 |
prostate stromal cell | 2.31e-12 | 3 |
enteric smooth muscle cell | 2.89e-12 | 3 |
smooth muscle cell of large intestine | 2.89e-12 | 3 |
smooth muscle cell of colon | 2.89e-12 | 3 |
Ontology term | p-value | n |
---|---|---|
prostate gland | 5.10e-13 | 11 |
male accessory sex gland | 5.10e-13 | 11 |
embryonic cloacal epithelium | 5.10e-13 | 11 |
epithelium of hindgut | 5.10e-13 | 11 |
urogenital sinus epithelium | 5.10e-13 | 11 |
prostate bud | 5.10e-13 | 11 |
prostate field | 5.10e-13 | 11 |
sex gland | 5.08e-12 | 12 |
male reproductive gland | 5.08e-12 | 12 |
cloaca | 1.90e-10 | 14 |
anal region | 1.90e-10 | 14 |
embryonic cloaca | 1.90e-10 | 14 |
terminal part of digestive tract | 1.90e-10 | 14 |
primitive urogenital sinus | 1.90e-10 | 14 |
proctodeum | 1.90e-10 | 14 |
genitourinary system | 8.10e-10 | 15 |
hindgut | 5.94e-08 | 19 |
male organism | 5.40e-07 | 22 |
male reproductive system | 5.40e-07 | 22 |
Ontology term | p-value | n |
---|---|---|
teratoma | 7.41e-67 | 2 |
germ cell and embryonal cancer | 4.79e-07 | 22 |
germ cell cancer | 4.79e-07 | 22 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.