FFCP PHASE1:Hg19::chr5:140579139..140579161,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=56125|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=8682|TSSclassifier=S|UniProt=B4DSF7|association_with_transcript=-21bp_to_ENST00000536699,uc011daj.1_5end|description=CAGE_peak_2_at_PCDHB11_5end|id=chr5:140579139..140579161,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0008947;5.22e-09;29!UBERON:0001041;4.03e-07;30|ontology_enrichment_disease=DOID:0050687!9.55e-15!143;DOID:305!1.04e-10!106;DOID:162!7.60e-09!235;DOID:14566!2.08e-08!239;DOID:1325!4.47e-07!7;DOID:3904!4.47e-07!7|ontology_enrichment_disease_v019=DOID:1325;1.25e-11;7!DOID:3904;1.25e-11;7!DOID:3905;2.93e-09;9!DOID:5409;3.64e-08;4!DOID:171;1.01e-07;10!DOID:1324;2.20e-07;15!DOID:4231;5.78e-07;2!DOID:1907;5.78e-07;2!DOID:0050615;7.11e-07;16|ontology_enrichment_disease_v019_2=DOID:0050687,3.27e-19,143;DOID:162,5.35e-15,235;DOID:305,1.63e-14,106;DOID:14566,1.82e-14,239;DOID:1325,1.02e-11,7;DOID:3904,1.02e-11,7;DOID:3905,2.05e-09,9;DOID:5409,2.51e-08,4;DOID:171,1.43e-07,10;DOID:1324,1.96e-07,15;DOID:0050686,2.88e-07,137;DOID:4231,3.04e-07,2;DOID:1907,3.04e-07,2;DOID:0050615,6.40e-07,16|ontology_enrichment_uberon=UBERON:0007023!5.45e-20!115;UBERON:0001017!1.94e-13!82;UBERON:0005743!5.69e-13!86;UBERON:0000073!2.11e-12!94;UBERON:0001016!2.11e-12!94;UBERON:0000955!2.72e-12!69;UBERON:0006238!2.72e-12!69;UBERON:0001049!6.38e-11!57;UBERON:0005068!6.38e-11!57;UBERON:0006241!6.38e-11!57;UBERON:0007135!6.38e-11!57;UBERON:0002616!1.46e-09!59;UBERON:0003080!3.27e-09!42;UBERON:0002780!9.86e-09!41;UBERON:0001890!9.86e-09!41;UBERON:0006240!9.86e-09!41;UBERON:0002346!3.84e-08!90;UBERON:0000924!1.46e-07!173;UBERON:0006601!1.46e-07!173;UBERON:0000153!3.35e-07!129;UBERON:0007811!3.35e-07!129;UBERON:0001737!4.55e-07!9;UBERON:0003075!4.75e-07!86;UBERON:0007284!4.75e-07!86;UBERON:0000033!5.20e-07!123|ontology_enrichment_uberon_v019=UBERON:0002346;1.30e-07;4!UBERON:0000923;1.30e-07;4!UBERON:0010316;1.30e-07;4!UBERON:0005291;1.30e-07;4!UBERON:0000007;5.78e-07;2|ontology_enrichment_uberon_v019_2=UBERON:0000007,5.83e-07,2|phase1_expression=0.363356758541113,0.214100523890983,0.563817616383885,1.0007329835313,0,0,0,0,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0.940364164434263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128091319725675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0.361439152384566,0.50133791063589,0.144846518960824,0,0.973269740605272,0,0,0,1.37528029272598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.208994966536811,0.258416759169329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0.302714855289863,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.640672166455702,0,0.300091096084402,0.103052529238439,0.257640540045629,0,1.0126579934476,0.389748020644795,0,0,0.161646056818812,0,0.10075209822764,0,0.193260853163297,0,0,0.487894824518382,0,0.232387885739037,0.207322110030741,0,0,0,0,0,0,0,1.18306800039844,0.505754070234305,1.20505514941741,0.992645754591546,1.52515610864684,0.237270619111097,0.539325232640658,0.588664395376038,1.15424147083917,0,0,0,0,0,0,0,0,0.122988438543114,0,0.109750285408626,0,0,0,0,0,0,0,0.352226082707465,0.144366447761074,0,0,0,1.71697232418975,0,0,0,0,0,0,0,0,0,0,0,0,0.288239906833923,0,0.063497894292169,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.239624855491583,0,0,0,0.205476322550383,0.358121926479791,0,0,0,0,1.52456774533478,0,0.773288812777695,0.335032530668698,0,0,0,0,0,0,0,0,0,0,0.117141414992713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496215615637554,0.306923946576125,0,0.384417447767103,0,0.321707842287215,0,0,0,0,0,0,0.725156697549733,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,1.09883357782012,1.48517099857058,0,0.650060246036521,0,0.193341436584244,0,0,0,0,0,0,0.623224249527161,0,0,0,0,0,0.31481234683064,0,0,0,0,0,0,0,0,0,0,0,0,0.78494864019923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.349934720244983,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0.846694330895531,0,0,0,0,0,0,0,0.201799707191048,0,0,0,0,0,0,0,0,0,1.99843180798692,0,0,2.3441308683503,0,0,0.284136146806413,0,0,0.307160702099232,0,0.422008249231538,2.11486539543521,0,1.68900326502395,1.9924798825107,0.276283915531148,0.251932747854276,0.102268682502155,0,0,0,0.537063524026827,0,0.690503839458535,0,1.11136990144637,0.969332746095218,0.463840490809256,0,0,0.0874599999961957,0.724999575434793,0,2.54253650292766,1.18193840883968,0.689486746482929,2.33283690706603,1.90987494426621,0.885741385813839,0.60298219312704,0,0.995213339381022,0.295547618953547,0.219385397153973,4.35753854075961,0.41827123283581,1.23120413606075,1.59518878185802,0,0.987334088507493,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0.635746315921515,0,1.632328081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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=56125 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8682 | |||
|TSSclassifier=S | |||
|UniProt=B4DSF7 | |||
|association_with_transcript=-21bp_to_ENST00000536699,uc011daj.1_5end | |||
|description=CAGE_peak_2_at_PCDHB11_5end | |||
|id=chr5:140579139..140579161,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0008947;5.22e-09;29!UBERON:0001041;4.03e-07;30 | |||
|ontology_enrichment_disease=DOID:0050687!9.55e-15!143;DOID:305!1.04e-10!106;DOID:162!7.60e-09!235;DOID:14566!2.08e-08!239;DOID:1325!4.47e-07!7;DOID:3904!4.47e-07!7 | |||
|ontology_enrichment_disease_v019=DOID:1325;1.25e-11;7!DOID:3904;1.25e-11;7!DOID:3905;2.93e-09;9!DOID:5409;3.64e-08;4!DOID:171;1.01e-07;10!DOID:1324;2.20e-07;15!DOID:4231;5.78e-07;2!DOID:1907;5.78e-07;2!DOID:0050615;7.11e-07;16 | |||
|ontology_enrichment_disease_v019_2=DOID:0050687,3.27e-19,143;DOID:162,5.35e-15,235;DOID:305,1.63e-14,106;DOID:14566,1.82e-14,239;DOID:1325,1.02e-11,7;DOID:3904,1.02e-11,7;DOID:3905,2.05e-09,9;DOID:5409,2.51e-08,4;DOID:171,1.43e-07,10;DOID:1324,1.96e-07,15;DOID:0050686,2.88e-07,137;DOID:4231,3.04e-07,2;DOID:1907,3.04e-07,2;DOID:0050615,6.40e-07,16 | |||
|ontology_enrichment_uberon=UBERON:0007023!5.45e-20!115;UBERON:0001017!1.94e-13!82;UBERON:0005743!5.69e-13!86;UBERON:0000073!2.11e-12!94;UBERON:0001016!2.11e-12!94;UBERON:0000955!2.72e-12!69;UBERON:0006238!2.72e-12!69;UBERON:0001049!6.38e-11!57;UBERON:0005068!6.38e-11!57;UBERON:0006241!6.38e-11!57;UBERON:0007135!6.38e-11!57;UBERON:0002616!1.46e-09!59;UBERON:0003080!3.27e-09!42;UBERON:0002780!9.86e-09!41;UBERON:0001890!9.86e-09!41;UBERON:0006240!9.86e-09!41;UBERON:0002346!3.84e-08!90;UBERON:0000924!1.46e-07!173;UBERON:0006601!1.46e-07!173;UBERON:0000153!3.35e-07!129;UBERON:0007811!3.35e-07!129;UBERON:0001737!4.55e-07!9;UBERON:0003075!4.75e-07!86;UBERON:0007284!4.75e-07!86;UBERON:0000033!5.20e-07!123 | |||
|ontology_enrichment_uberon_v019=UBERON:0002346;1.30e-07;4!UBERON:0000923;1.30e-07;4!UBERON:0010316;1.30e-07;4!UBERON:0005291;1.30e-07;4!UBERON:0000007;5.78e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000007,5.83e-07,2 | |||
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| |||
|short_description=p2@PCDHB11 | |||
}} |
Revision as of 13:35, 13 September 2013
Short description: | p2@PCDHB11 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_PCDHB11_5end |
Coexpression cluster: | NA |
Association with transcript: | -21bp_to_ENST00000536699, uc011daj.1_5end |
EntrezGene: | PCDHB11 |
HGNC: | 8682 |
UniProt: | B4DSF7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pituitary gland | 5.83e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
cell type cancer | 3.27e-19 | 143 |
cancer | 5.35e-15 | 235 |
carcinoma | 1.63e-14 | 106 |
disease of cellular proliferation | 1.82e-14 | 239 |
bronchus cancer | 1.02e-11 | 7 |
bronchogenic carcinoma | 1.02e-11 | 7 |
lung carcinoma | 2.05e-09 | 9 |
lung small cell carcinoma | 2.51e-08 | 4 |
neuroectodermal tumor | 1.43e-07 | 10 |
lung cancer | 1.96e-07 | 15 |
organ system cancer | 2.88e-07 | 137 |
histiocytoma | 3.04e-07 | 2 |
malignant fibroxanthoma | 3.04e-07 | 2 |
respiratory system cancer | 6.40e-07 | 16 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.