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FFCP PHASE1:Mm9::chr17:6106908..6106922,+: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=68842|HGNC=|MCL_coexpression_id=230|UniProt=Q3UH13|association_with_transcript=17bp_to_ENSMUST00000149756_5end|description=CAGE_peak_5_at_Tulp4_5end|id=chr17:6106908..6106922,+|ontology_enrichment_celltype=CL:0000393!1.41e-15!39;CL:0000211!1.41e-15!39;CL:0000055!3.07e-13!50;CL:0000540!9.91e-13!33;CL:0000047!9.91e-13!33;CL:0000031!9.91e-13!33;CL:0000404!9.91e-13!33;CL:0002321!4.39e-12!70;CL:0000220!4.39e-12!70;CL:0000221!1.18e-11!44;CL:0000133!1.18e-11!44;CL:0002319!2.22e-11!43;CL:0000117!2.04e-09!23;CL:0000337!2.04e-09!23|ontology_enrichment_celltype_v019_2=CL:0000393,7.54e-19,39;CL:0000211,7.54e-19,39;CL:0000540,3.90e-15,33;CL:0000047,3.90e-15,33;CL:0000031,3.90e-15,33;CL:0000404,3.90e-15,33;CL:0000221,2.97e-13,44;CL:0000133,2.97e-13,44;CL:0002321,5.13e-13,70;CL:0002319,7.26e-13,43;CL:0000117,1.70e-11,23;CL:0000337,1.70e-11,23;CL:0000034,7.07e-08,97;CL:0000723,1.59e-07,91;CL:0000048,1.59e-07,91|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!5.19e-12!75;UBERON:0001016!5.19e-12!75;UBERON:0004121!5.96e-12!102;UBERON:0000924!5.96e-12!102;UBERON:0006601!5.96e-12!102;UBERON:0001017!6.55e-11!73;UBERON:0005743!6.55e-11!73|ontology_enrichment_uberon_v019_2=UBERON:0004121,2.55e-15,95;UBERON:0000924,2.55e-15,95;UBERON:0006601,2.55e-15,95;UBERON:0001016,1.34e-13,75;UBERON:0001017,3.90e-12,73;UBERON:0010371,1.92e-09,73;UBERON:0002346,1.16e-07,64;UBERON:0003075,1.16e-07,64;UBERON:0007284,1.16e-07,64;UBERON:0000073,4.15e-07,54|phase1_expression=1.76163731815273,1.04692622291808,0.909998478779072,0.90739263392049,0,1.17515490338323,1.40167584357315,0,1.68946466582,2.10658073689794,0.171217968225505,0.159544317990673,0,0,0,0,0,0,0.137114433605739,0,1.02051948181284,0.198581902401771,0,0.47997726838022,0.68822784320151,1.14846392823004,0.430761996159075,1.07735616342945,1.14014051673824,0.252030129759931,0.886922042621219,0,0,0,0,0,0.408338712524738,0,0,0,0,0,0,14.4781340671914,16.6258167200004,14.5001934207728,0,0,0.878744730937887,0.194429899074283,0.419959264876088,1.43752564364972,0.335565212115473,1.45072428402269,1.34437519656986,3.08711323243136,2.0057340795713,0.515672092277442,1.41621522601718,1.05798195854407,4.43681982454325,1.69422266034566,0.889294796111139,1.7997994345628,0,0,0.898800331555214,0.768436610643109,1.8664130215526,2.29510095163874,1.05162480675691,2.28520787523043,1.10434270475807,1.71487118900936,1.15014565221884,0.919218786610021,2.20231761998777,2.55374676170375,1.99688493233117,1.58263545276233,1.28082701043374,1.04182674111352,2.51264699101243,2.25105044012672,2.75036845998258,1.47314292736834,0.854230084794618,1.4911955666024,19.4616316866283,9.52201657345497,0.869593466105033,0,1.3599426674155,0.539703191637817,0.649776417447669,0.448026887097336,0.842666520790511,3.06774580640504,1.55871602761721,3.18005617059306,1.26759077799012,5.13305909657271,2.54805239706646,0,0.865964164044856,0.506719730950197,0,0.79928715803342,0.258937883647172,0.148442139064825,0.346970653532272,0.304465478312141,0.461230994512117,0.301445281105245,0.587943535678524,0.125666591329675,1.73036477414062,0.289198713839823,0,0.970601099684455,0.441683036920787,0.484875253135222,0,1.75668478206928,3.77004072264219,1.27728527604296,0.11981512450592,0,0,2.69623150928681,0.915001205637253,1.7591609295801,1.21677024134594,0.255715457330331,1.66230435647648,2.59586020908412,0.611036183101898,0.622034853050465,0.252722758433675,0.420883711772948,0.520481771850815,0.229902104433473,1.0803727788321,0.452114453507145,2.10913147369116,2.69038812598185,2.24884138943349,0.776110112217047,0.646703978798527,1.51284864134255,0.351902248327898,1.09597866213787,0.278047249225598,1.39300866608867,1.02891068203972,0.59710280045548,0,0,0,0.621377317606506,0,0.180062061461015,0.710234206755631,0.393528463494808,0.308534225774757,0.930135779001631,0,1.05088808130453,1.15191894939436,0.656669856316381,1.05389452409612,1.16959989940266,0,0.402619256281115,0.630869845692382,1.13195073617213,0.330418782983798,0.528901133327089,0.426576501070468,0.232236671860439,0.77320476793256,1.00841762311671,0.22237804384487,0.951128130562796,0,0.658795818896044,1.00534083520108,0.994782360205754,0.19496408711912,0,0.216138049874694,0.995706366271836,0.189667900953082,0,0,0,0.387904974335251,0.771494018793504,0.632365371242573,0.885660887877613,0.627994911365499,0.370191491765402,0,0.500535317148282,0.393117990226406,0,0.202860121388503,0,0,0,0.162135226775035,0.549122826376163,1.43768206527355,0.372140947668503,0,0,0,0.964887042726734,0.554259570499814,0.37898282354097,0.488894929326078,0.339490171550376,0.234690248288502,0.167506257441816,0.238043640886014,1.75620283072019,1.57635144106191,1.7717175171902,0.956728611944923,0.491589944147214,0.690739927463582,0.578596234326046,0,1.08781136763742,0,0,3.85321415970701,4.21962071731931,2.13115428989678,0.504941854408746,1.26203287766503,1.56175497718655,1.72338718186239,0.716906393857656,0.668396022247182,1.69845918473299,2.83367491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|EntrezGene=68842
|HGNC=
|MCL_coexpression_id=230
|UniProt=Q3UH13
|association_with_transcript=17bp_to_ENSMUST00000149756_5end
|description=CAGE_peak_5_at_Tulp4_5end
|id=chr17:6106908..6106922,+
|ontology_enrichment_celltype=CL:0000393!1.41e-15!39;CL:0000211!1.41e-15!39;CL:0000055!3.07e-13!50;CL:0000540!9.91e-13!33;CL:0000047!9.91e-13!33;CL:0000031!9.91e-13!33;CL:0000404!9.91e-13!33;CL:0002321!4.39e-12!70;CL:0000220!4.39e-12!70;CL:0000221!1.18e-11!44;CL:0000133!1.18e-11!44;CL:0002319!2.22e-11!43;CL:0000117!2.04e-09!23;CL:0000337!2.04e-09!23
|ontology_enrichment_celltype_v019_2=CL:0000393,7.54e-19,39;CL:0000211,7.54e-19,39;CL:0000540,3.90e-15,33;CL:0000047,3.90e-15,33;CL:0000031,3.90e-15,33;CL:0000404,3.90e-15,33;CL:0000221,2.97e-13,44;CL:0000133,2.97e-13,44;CL:0002321,5.13e-13,70;CL:0002319,7.26e-13,43;CL:0000117,1.70e-11,23;CL:0000337,1.70e-11,23;CL:0000034,7.07e-08,97;CL:0000723,1.59e-07,91;CL:0000048,1.59e-07,91
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000073!5.19e-12!75;UBERON:0001016!5.19e-12!75;UBERON:0004121!5.96e-12!102;UBERON:0000924!5.96e-12!102;UBERON:0006601!5.96e-12!102;UBERON:0001017!6.55e-11!73;UBERON:0005743!6.55e-11!73
|ontology_enrichment_uberon_v019_2=UBERON:0004121,2.55e-15,95;UBERON:0000924,2.55e-15,95;UBERON:0006601,2.55e-15,95;UBERON:0001016,1.34e-13,75;UBERON:0001017,3.90e-12,73;UBERON:0010371,1.92e-09,73;UBERON:0002346,1.16e-07,64;UBERON:0003075,1.16e-07,64;UBERON:0007284,1.16e-07,64;UBERON:0000073,4.15e-07,54
|phase1_expression=1.76163731815273,1.04692622291808,0.909998478779072,0.90739263392049,0,1.17515490338323,1.40167584357315,0,1.68946466582,2.10658073689794,0.171217968225505,0.159544317990673,0,0,0,0,0,0,0.137114433605739,0,1.02051948181284,0.198581902401771,0,0.47997726838022,0.68822784320151,1.14846392823004,0.430761996159075,1.07735616342945,1.14014051673824,0.252030129759931,0.886922042621219,0,0,0,0,0,0.408338712524738,0,0,0,0,0,0,14.4781340671914,16.6258167200004,14.5001934207728,0,0,0.878744730937887,0.194429899074283,0.419959264876088,1.43752564364972,0.335565212115473,1.45072428402269,1.34437519656986,3.08711323243136,2.0057340795713,0.515672092277442,1.41621522601718,1.05798195854407,4.43681982454325,1.69422266034566,0.889294796111139,1.7997994345628,0,0,0.898800331555214,0.768436610643109,1.8664130215526,2.29510095163874,1.05162480675691,2.28520787523043,1.10434270475807,1.71487118900936,1.15014565221884,0.919218786610021,2.20231761998777,2.55374676170375,1.99688493233117,1.58263545276233,1.28082701043374,1.04182674111352,2.51264699101243,2.25105044012672,2.75036845998258,1.47314292736834,0.854230084794618,1.4911955666024,19.4616316866283,9.52201657345497,0.869593466105033,0,1.3599426674155,0.539703191637817,0.649776417447669,0.448026887097336,0.842666520790511,3.06774580640504,1.55871602761721,3.18005617059306,1.26759077799012,5.13305909657271,2.54805239706646,0,0.865964164044856,0.506719730950197,0,0.79928715803342,0.258937883647172,0.148442139064825,0.346970653532272,0.304465478312141,0.461230994512117,0.301445281105245,0.587943535678524,0.125666591329675,1.73036477414062,0.289198713839823,0,0.970601099684455,0.441683036920787,0.484875253135222,0,1.75668478206928,3.77004072264219,1.27728527604296,0.11981512450592,0,0,2.69623150928681,0.915001205637253,1.7591609295801,1.21677024134594,0.255715457330331,1.66230435647648,2.59586020908412,0.611036183101898,0.622034853050465,0.252722758433675,0.420883711772948,0.520481771850815,0.229902104433473,1.0803727788321,0.452114453507145,2.10913147369116,2.69038812598185,2.24884138943349,0.776110112217047,0.646703978798527,1.51284864134255,0.351902248327898,1.09597866213787,0.278047249225598,1.39300866608867,1.02891068203972,0.59710280045548,0,0,0,0.621377317606506,0,0.180062061461015,0.710234206755631,0.393528463494808,0.308534225774757,0.930135779001631,0,1.05088808130453,1.15191894939436,0.656669856316381,1.05389452409612,1.16959989940266,0,0.402619256281115,0.630869845692382,1.13195073617213,0.330418782983798,0.528901133327089,0.426576501070468,0.232236671860439,0.77320476793256,1.00841762311671,0.22237804384487,0.951128130562796,0,0.658795818896044,1.00534083520108,0.994782360205754,0.19496408711912,0,0.216138049874694,0.995706366271836,0.189667900953082,0,0,0,0.387904974335251,0.771494018793504,0.632365371242573,0.885660887877613,0.627994911365499,0.370191491765402,0,0.500535317148282,0.393117990226406,0,0.202860121388503,0,0,0,0.162135226775035,0.549122826376163,1.43768206527355,0.372140947668503,0,0,0,0.964887042726734,0.554259570499814,0.37898282354097,0.488894929326078,0.339490171550376,0.234690248288502,0.167506257441816,0.238043640886014,1.75620283072019,1.57635144106191,1.7717175171902,0.956728611944923,0.491589944147214,0.690739927463582,0.578596234326046,0,1.08781136763742,0,0,3.85321415970701,4.21962071731931,2.13115428989678,0.504941854408746,1.26203287766503,1.56175497718655,1.72338718186239,0.716906393857656,0.668396022247182,1.69845918473299,2.83367491172426,1.75353514746787,2.76701444562566,1.28528526568723,0.567760340833074,0,0.977321756121456,0.164970122972535,2.65490276679926,0,0.302323556964751,0.188605079755898,0.295301892880773,0.307435147943927,0.258428293168221,0.363533729477506,0.356497378384721,0.316036757935816,0,0,1.02131881726136,0.36012218806262,0,0,0.532020700926821,0.713475270408282,0.658196082408484,0.913394847343798,0,3.60114520468494,0.661585194164886,1.31909002353184,1.13025098687134,1.20625849856312,1.19372344003136,1.31312719796049,1.1659233465194,6.86073617438886,0,0.206386867963223,0.185194527369712,0.188368457004691,0,0,0,0,0,0,0.474503990371703,0.609958401380546,0.540026704109006,0.418176592028937,0,1.34864346384821,0.909188012978695,0.26175594198403,0.518459893167171,0.621339313086926,0,0.598066184175915,0.330916980914195,0.388902376688095,0.258319646955462,0,1.64300134104056,1.0416350787516,0.314578033277133,0,0.576060012515731,0.316011120628178,0,0.205421914329655,0.25984164595559,0,0,0,0.147689527174577,0.201932899896295,0.228620419965,0,0.292373642219257,0.0962118416403295,0,0.906921534460845,1.77588762699252,1.34570784914214,1.17519231454855,0.579568782096571,0.187682475451182,0.36630324853453,0.857473516316263,1.00314420807073,1.6942555278512,0,0,0.515559547031063,0.685082519770642,0,1.35004500046361,0.900642406448441,0,0,0.415149390336707,1.19707462020309,0.853668028770671,0.729320151204882,0.838452650511929,0.919217542250071,0.888986911206461,0.824140228955577,0.64183841918363,0.758091635291392,0.5069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|short_description=p5@Tulp4
}}

Revision as of 15:05, 13 September 2013

Short description:p5@Tulp4
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_5_at_Tulp4_5end
Coexpression cluster:MCL_coexpression_mm9:230
Association with transcript: 17bp_to_ENSMUST00000149756_5end
EntrezGene:Tulp4
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p5@Tulp4

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.76
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I51.05
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.91
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.91
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I71.18
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I81.40
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E71.69
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F22.11
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.17
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.16
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.14
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.02
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.20
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.48
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.69
GP2+ M cell, pool1.CNhs13228.11845-124H91.15
GP2+ M cell, pool2.CNhs13231.11846-124I10.43
GP2+ M cell, pool3.CNhs13240.11847-124I21.08
Ileum epithelium, pool1.CNhs13199.10252-104B91.14
Ileum epithelium, pool2.CNhs13232.10253-104C10.25
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.89
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.41
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D814.48
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D916.63
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B314.50
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.88
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.42
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.34
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I91.45
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A11.34
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C13.09
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E12.01
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C31.42
Mouse Granule cells, donor2.CNhs12357.11731-123E31.06
Mouse Granule cells, donor3.CNhs12108.11636-122C74.44
Mouse Meningeal cells, donor1.CNhs12132.11716-123C61.69
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C71.80
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.90
Mouse Microglia, donor2.CNhs12634.11736-123E80.77
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.87
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F52.30
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.05
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F12.29
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.10
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D21.71
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F21.15
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D32.20
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F32.55
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D72.00
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.58
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.28
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.04
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E42.51
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E52.25
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I62.75
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D61.47
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.85
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E11.49
Mouse Schwann, donor1.CNhs12507.11728-123D919.46
Mouse Schwann, donor2.CNhs12573.11746-123F99.52
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.87
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C41.36
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.54
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.65
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.45
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.84
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I73.07
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E31.56
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I83.18
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.27
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H15.13
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I82.55
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.87
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.51
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.80
accessory axillary lymph node, adult.CNhs10475.1063-29H90.26
adrenal gland, adult.CNhs10508.49-24D70.15
adrenal gland, embryo E14.CNhs11038.406-44C50.35
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.46
adrenal gland, embryo E18.CNhs11026.1262-18F50.30
adrenal gland, neonate N00.CNhs11191.1311-23C10.59
adrenal gland, neonate N25.CNhs11223.1377-27I30.13
amnion, adult pregnant day17.5.CNhs10488.583-22A81.73
aorta, adult.CNhs10498.46-23H10.29
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.97
bone (os femoris), neonate N16.CNhs11225.1525-43A60.44
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B21.76
cerebellum, neonate N30.CNhs11135.1395-42I23.77
colon, adult.CNhs10468.36-18H71.28
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.12
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A42.70
corpus striatum, adult.CNhs10487.19-21D80.92
corpus striatum, neonate N00.CNhs11226.630-43F11.76
cortex, adult.CNhs10473.12-14D51.22
cortex, neonate N30.CNhs11107.1392-42F20.26
diencephalon, adult.CNhs10482.20-12F21.66
diencephalon, neonate N30.CNhs11201.1388-42B22.60
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.61
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.62
epididymis, adult.CNhs10490.58-23B20.25
eyeball, adult.CNhs10484.31-12G40.42
eyeball, embryo E12.CNhs11016.345-16C60.52
eyeball, embryo E14.CNhs10521.399-16E20.23
eyeball, embryo E15.CNhs10593.426-16C91.08
eyeball, embryo E17.CNhs11023.1261-18D40.45
eyeball, neonate N00.CNhs11207.633-15C62.11
eyeball, neonate N01.CNhs11140.1532-43E72.69
eyeball, neonate N02.CNhs11205.1551-44G82.25
eyeball, neonate N16.CNhs11188.777-19A20.78
forelimb, embryo E11.CNhs10596.335-25E20.65
forelimb, embryo E12.CNhs10600.359-14H21.51
forelimb, embryo E13.CNhs10589.384-1E20.35
forelimb, embryo E14.CNhs10577.413-26A81.10
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C41.39
forelimb, embryo E18.CNhs11008.1520-43B51.03
gonad, embryo E13.CNhs11044.1564-45I60.60
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.62
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.71
heart, embryo E15.CNhs11017.431-16C80.39
heart, embryo E16.CNhs11021.457-17C60.31
heart, embryo E17.CNhs11025.479-18E50.93
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E31.05
heart, neonate N03.CNhs11221.1349-25I21.15
heart, neonate N10.CNhs11118.749-24G10.66
heart, neonate N16.CNhs11209.782-15G11.05
heart, neonate N20.CNhs11127.821-26I61.17
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.40
hippocampus, adult.CNhs10478.13-16E80.63
hippocampus, neonate N00.CNhs11228.627-43G11.13
intestinal mucosa, adult.CNhs10506.860-29I30.33
intestine, adult.CNhs10496.178-9A30.53
intestine, embryo E12.CNhs11019.1251-16I50.43
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.77
intestine, embryo E16.CNhs10585.463-22H41.01
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.95
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.66
intestine, neonate N06.CNhs11102.688-20B81.01
intestine, neonate N07.CNhs11095.720-20F20.99
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G11.00
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.00
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.39
kidney, neonate N00.CNhs11214.646-21G70.77
kidney, neonate N10.CNhs11206.758-6D50.63
kidney, neonate N20.CNhs11113.832-19I10.89
kidney, neonate N25.CNhs11122.1353-25F30.63
kidney, neonate N30.CNhs11203.1385-42H10.37
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.50
liver, embryo E13.CNhs10524.378-3H60.39
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.16
liver, neonate N03.CNhs11123.1345-25G20.55
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H20.37
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.96
lung, adult.CNhs10474.28-22B10.55
lung, embryo E12.CNhs10522.354-16G20.38
lung, embryo E14.CNhs10604.404-26F80.49
lung, embryo E15.CNhs11020.432-17C50.34
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A60.17
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C61.76
lung, neonate N06.CNhs11212.683-20E51.58
lung, neonate N07.CNhs11111.715-19A31.77
lung, neonate N10.CNhs11219.750-23E60.96
lung, neonate N20.CNhs11109.822-18A40.49
lung, neonate N25.CNhs11119.1359-25C70.69
lung, neonate N30.CNhs11133.1394-42H20.58
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A11.09
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C23.85
medulla oblongata, neonate N30.CNhs11200.1396-42A34.22
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C72.13
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.50
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E11.26
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.56
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.72
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.72
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.67
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D91.70
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D42.83
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D51.75
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D62.77
olfactory brain, adult.CNhs10489.18-22I91.29
ovary, adult.CNhs10507.91-2I70.57
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.98
oviduct, adult pregnant day01.CNhs10500.988-6G60.16
pancreas, adult.CNhs10486.34-16E42.65
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G81.02
pituitary gland, embryo E12.CNhs11018.346-16E60.36
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.53
pituitary gland, embryo E16.CNhs11036.449-43F60.71
pituitary gland, embryo E17.CNhs11039.1265-44F50.66
pituitary gland, neonate N00.CNhs11190.1308-22E90.91
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G33.60
prostate, adult.CNhs10470.859-1F80.66
skin, adult.CNhs10492.30-1C31.32
skin, neonate N00.CNhs11124.650-25G41.13
skin, neonate N03.CNhs11215.662-22H31.21
skin, neonate N06.CNhs11097.693-20I51.19
skin, neonate N10.CNhs11108.762-6C41.31
small intestine, neonate N16.CNhs11114.790-21I11.17
spinal cord, adult.CNhs10505.24-13C96.86
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.19
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.47
stomach, embryo E15.CNhs10603.1252-16G80.61
stomach, embryo E16.CNhs11022.459-17D40.54
stomach, embryo E17.CNhs11006.1035-18D50.42
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B81.35
stomach, neonate N07.CNhs11210.718-18A90.91
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.52
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.60
testis, embryo E15.CNhs11034.443-27C50.33
testis, embryo E16.CNhs11033.470-26G50.39
testis, embryo E17.CNhs11029.486-18I50.26
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B71.64
testis, neonate N07.CNhs11222.726-26I41.04
testis, neonate N10.CNhs11204.763-44D90.31
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.58
thymus, adult.CNhs10471.38-12B50.32
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.21
thymus, embryo E16.CNhs11002.456-26C50.26
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.15
thymus, neonate N06.CNhs11197.681-26C40.20
thymus, neonate N07.CNhs11211.713-19D30.23
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.29
thymus, neonate N25.CNhs11125.1362-25G70.10
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.91
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H31.78
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F71.35
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G51.18
urinary bladder, adult.CNhs10481.879-12E40.58
uterus, adult pregnant day19.CNhs10497.590-15F50.19
uterus, adult.CNhs10509.92-27E50.37
vagina, adult.CNhs10502.89-27D50.86
vesicular gland, adult.CNhs10491.51-27F81.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A11.69
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.52
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.69
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A61.35
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.90
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.42
whole body, embryo E12.CNhs10587.857-27C91.20
whole body, embryo E13.CNhs10512.372-23H20.85
whole body, embryo E14.5.CNhs10578.420-27D20.73
whole body, embryo E14.CNhs10519.395-14B10.84
whole body, embryo E16.CNhs10514.453-14F20.92
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.37
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.80
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.39
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.35
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.72
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.10
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.79
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.54
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.30
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.08
whole body, embryo E17.5.CNhs10513.490-9F90.77
whole body, embryo E17.CNhs10517.475-3I51.50
whole body, embryo E18.CNhs10516.493-3B30.23
whole body, neonate N00.CNhs10525.657-19C20.86
whole body, neonate N01.CNhs10576.659-23C61.34
whole body, neonate N06.CNhs10515.692-21D10.00
whole body, neonate N10.CNhs10518.761-6B41.39





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
electrically responsive cell7.54e-1939
electrically active cell7.54e-1939
neuron3.90e-1533
neuronal stem cell3.90e-1533
neuroblast3.90e-1533
electrically signaling cell3.90e-1533
ectodermal cell2.97e-1344
neurectodermal cell2.97e-1344
embryonic cell5.13e-1370
neural cell7.26e-1343
CNS neuron (sensu Vertebrata)1.70e-1123
neuroblast (sensu Vertebrata)1.70e-1123
stem cell7.07e-0897
somatic stem cell1.59e-0791
multi fate stem cell1.59e-0791

Uber anatomy
Ontology termp-valuen
ectoderm-derived structure2.55e-1595
ectoderm2.55e-1595
presumptive ectoderm2.55e-1595
nervous system1.34e-1375
central nervous system3.90e-1273
ecto-epithelium1.92e-0973
neurectoderm1.16e-0764
neural plate1.16e-0764
presumptive neural plate1.16e-0764
regional part of nervous system4.15e-0754







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

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