FFCP PHASE1:Mm9::chr18:32109368..32109396,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=574402|HGNC=|MCL_coexpression_id=107|UniProt=Q6NS65|association_with_transcript=-78bp_to_ENSMUST00000064016,NM_001025381,uc008eiw.2_5end|description=CAGE_peak_2_at_Gpr17_5end|id=chr18:32109368..32109396,-|ontology_enrichment_celltype=CL:0000107!2.18e-09!9;CL:0000540!2.52e-07!33;CL:0000047!2.52e-07!33;CL:0000031!2.52e-07!33;CL:0000404!2.52e-07!33|ontology_enrichment_celltype_v019_2=CL:0000107,4.02e-21,9;CL:0000540,1.39e-12,33;CL:0000047,1.39e-12,33;CL:0000031,1.39e-12,33;CL:0000404,1.39e-12,33;CL:0002319,1.20e-11,43;CL:0000221,2.75e-11,44;CL:0000133,2.75e-11,44;CL:0000393,4.47e-10,39;CL:0000211,4.47e-10,39;CL:0002612,8.47e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004121!9.78e-13!102;UBERON:0000924!9.78e-13!102;UBERON:0006601!9.78e-13!102;UBERON:0001017!3.48e-12!73;UBERON:0005743!3.48e-12!73;UBERON:0000073!2.10e-11!75;UBERON:0001016!2.10e-11!75;UBERON:0002346!1.10e-10!71;UBERON:0003075!1.10e-10!71;UBERON:0007284!1.10e-10!71;UBERON:0002410!2.18e-09!9;UBERON:0000010!5.60e-07!11|ontology_enrichment_uberon_v019_2=UBERON:0002410,4.02e-21,9;UBERON:0000010,6.53e-17,11;UBERON:0001017,6.28e-15,73;UBERON:0001016,2.34e-14,75;UBERON:0001948,4.29e-11,5;UBERON:0002315,4.29e-11,5;UBERON:0004121,5.09e-11,95;UBERON:0000924,5.09e-11,95;UBERON:0006601,5.09e-11,95;UBERON:0002240,3.57e-09,6;UBERON:0005174,3.57e-09,6;UBERON:0001137,3.57e-09,6;UBERON:0000011,2.39e-08,3;UBERON:0003076,4.25e-08,12;UBERON:0003057,4.25e-08,12;UBERON:0000013,5.27e-08,3;UBERON:0010313,5.85e-08,3;UBERON:0002342,5.85e-08,3;UBERON:0002005,5.85e-08,3;UBERON:0005428,5.85e-08,3;UBERON:0005062,5.85e-08,3;UBERON:0002346,6.87e-08,64;UBERON:0003075,6.87e-08,64;UBERON:0007284,6.87e-08,64;UBERON:0002257,8.47e-07,3|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404632921719196,0,0.633831403506179,0,0,0,0,0,2.99600110518405,1.53687322128622,0.103689612308478,0.135005938331691,0,6.56997264128748,6.18431914664518,0,0.0958454710182364,0,0,0.638436690425939,0.307213066512487,0.131886287730194,0,0,0,0,1.06958773443767,2.06240009831567,1.28134512719193,1.3047961207771,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0,1.90833859442749,1.21786191324856,1.15307748628029,0.60289056221049,0.470354828542819,0,0,0,0,0.808834249737046,0,0,0,0.292780797011547,1.25668024088073,0,0,0,0,1.19832511523858,0,0.125654352112864,0.521472960576829,1.02286182932132,1.0389402227978,2.27137768294861,0,0,0,0,0.390361328888111,0,0.360124259610698,0.30140963567143,0.136072998302656,0.12811372028485,0.0937017245597288,1.55222022443409,0,0.189106080167819,0.527853372491847,0.219195732427575,0.834141747676794,0,0.823128545631774,0,0,0,0,0,0.234526059981096,0,0,0,0,0.232533944750408,0,0,0,0,0,0,0,0,0.630869845692382,0.720332286654991,0,0,0.426576501070468,0.232236671860439,1.15980715189884,1.4117846723634,1.55664630691409,0.760902504450237,0,0.329397909448022,0.754005626400808,1.1937388322469,0,0.898819408654221,0,0,0,0.114248512609729,0,0.407302655690628,0.193952487167626,0.0701358198903186,0,0,0,0,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0.325929952884052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.642202359951168,2.69586879162067,0,0,4.41711507182759,3.90438744296638,9.47862950024315,7.64700153448166,20.0518806674155,16.4184387857523,3.64329631507405,5.55286130031493,10.6727700045561,0,0,0.534196811001766,0.162886959353576,0,0,0.485561272309963,0,0.188605079755898,0.590603785761546,0.307435147943927,0.258428293168221,0.363533729477506,0,0.316036757935816,0,0,0,0,0,0.214337035031592,0,0,0.164549020602121,0,0,0,0,0,0.161464426695906,0.542816324353403,0.596861720015682,0.164140899745061,0,0.556275906031529,0,0,0,0,0,0,0,0,0,0,2.05618395827738,1.62655573701479,0.756037385752609,1.04544148007234,0.436725127492355,1.07891477107857,1.48776220305605,0,0,0,0,0,0.165458490457098,0,0,0,0,0,0,0,0,0,0,0.205421914329655,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.3885110557024,1.84130094602871,5.15605962095457,2.23409137046794,0.685082519770642,0.755393897389701,0.675022500231806,0.900642406448441,0.906284817968409,0,0.31136204275253,0.399024873401031,0.170733605754134,0,0.419226325255965,0.551530525350042,0.44449345560323,0.824140228955577,0.320919209591815,0,0.50695859978048,0,0.561849044819294,0.576226371643824,0.229741875822453,0.952587382566147,0.463537303779422,0,0,0.294397840268795,1.02860775715625,0.532427418478012,0.238436189947321,0.145346416632329,0.188218760830661,0.423073039458382,0.182927972872773,0.526139422875686,0.407412341537585,1.68342681497322,0.237270036248348,0.394017929502254,0,0.154936841185966,0.771626443924566,0.749431733813838,0.467863216890817,0.214871054048298,0.382576664137687,0.661774257358546,1.39120701372253|short_description=p2@Gpr17}} | ||
|EntrezGene=574402 | |||
|HGNC= | |||
|MCL_coexpression_id=107 | |||
|UniProt=Q6NS65 | |||
|association_with_transcript=-78bp_to_ENSMUST00000064016,NM_001025381,uc008eiw.2_5end | |||
|description=CAGE_peak_2_at_Gpr17_5end | |||
|id=chr18:32109368..32109396,- | |||
|ontology_enrichment_celltype=CL:0000107!2.18e-09!9;CL:0000540!2.52e-07!33;CL:0000047!2.52e-07!33;CL:0000031!2.52e-07!33;CL:0000404!2.52e-07!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000107,4.02e-21,9;CL:0000540,1.39e-12,33;CL:0000047,1.39e-12,33;CL:0000031,1.39e-12,33;CL:0000404,1.39e-12,33;CL:0002319,1.20e-11,43;CL:0000221,2.75e-11,44;CL:0000133,2.75e-11,44;CL:0000393,4.47e-10,39;CL:0000211,4.47e-10,39;CL:0002612,8.47e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!9.78e-13!102;UBERON:0000924!9.78e-13!102;UBERON:0006601!9.78e-13!102;UBERON:0001017!3.48e-12!73;UBERON:0005743!3.48e-12!73;UBERON:0000073!2.10e-11!75;UBERON:0001016!2.10e-11!75;UBERON:0002346!1.10e-10!71;UBERON:0003075!1.10e-10!71;UBERON:0007284!1.10e-10!71;UBERON:0002410!2.18e-09!9;UBERON:0000010!5.60e-07!11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002410,4.02e-21,9;UBERON:0000010,6.53e-17,11;UBERON:0001017,6.28e-15,73;UBERON:0001016,2.34e-14,75;UBERON:0001948,4.29e-11,5;UBERON:0002315,4.29e-11,5;UBERON:0004121,5.09e-11,95;UBERON:0000924,5.09e-11,95;UBERON:0006601,5.09e-11,95;UBERON:0002240,3.57e-09,6;UBERON:0005174,3.57e-09,6;UBERON:0001137,3.57e-09,6;UBERON:0000011,2.39e-08,3;UBERON:0003076,4.25e-08,12;UBERON:0003057,4.25e-08,12;UBERON:0000013,5.27e-08,3;UBERON:0010313,5.85e-08,3;UBERON:0002342,5.85e-08,3;UBERON:0002005,5.85e-08,3;UBERON:0005428,5.85e-08,3;UBERON:0005062,5.85e-08,3;UBERON:0002346,6.87e-08,64;UBERON:0003075,6.87e-08,64;UBERON:0007284,6.87e-08,64;UBERON:0002257,8.47e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404632921719196,0,0.633831403506179,0,0,0,0,0,2.99600110518405,1.53687322128622,0.103689612308478,0.135005938331691,0,6.56997264128748,6.18431914664518,0,0.0958454710182364,0,0,0.638436690425939,0.307213066512487,0.131886287730194,0,0,0,0,1.06958773443767,2.06240009831567,1.28134512719193,1.3047961207771,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0,1.90833859442749,1.21786191324856,1.15307748628029,0.60289056221049,0.470354828542819,0,0,0,0,0.808834249737046,0,0,0,0.292780797011547,1.25668024088073,0,0,0,0,1.19832511523858,0,0.125654352112864,0.521472960576829,1.02286182932132,1.0389402227978,2.27137768294861,0,0,0,0,0.390361328888111,0,0.360124259610698,0.30140963567143,0.136072998302656,0.12811372028485,0.0937017245597288,1.55222022443409,0,0.189106080167819,0.527853372491847,0.219195732427575,0.834141747676794,0,0.823128545631774,0,0,0,0,0,0.234526059981096,0,0,0,0,0.232533944750408,0,0,0,0,0,0,0,0,0.630869845692382,0.720332286654991,0,0,0.426576501070468,0.232236671860439,1.15980715189884,1.4117846723634,1.55664630691409,0.760902504450237,0,0.329397909448022,0.754005626400808,1.1937388322469,0,0.898819408654221,0,0,0,0.114248512609729,0,0.407302655690628,0.193952487167626,0.0701358198903186,0,0,0,0,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0.325929952884052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.642202359951168,2.69586879162067,0,0,4.41711507182759,3.90438744296638,9.47862950024315,7.64700153448166,20.0518806674155,16.4184387857523,3.64329631507405,5.55286130031493,10.6727700045561,0,0,0.534196811001766,0.162886959353576,0,0,0.485561272309963,0,0.188605079755898,0.590603785761546,0.307435147943927,0.258428293168221,0.363533729477506,0,0.316036757935816,0,0,0,0,0,0.214337035031592,0,0,0.164549020602121,0,0,0,0,0,0.161464426695906,0.542816324353403,0.596861720015682,0.164140899745061,0,0.556275906031529,0,0,0,0,0,0,0,0,0,0,2.05618395827738,1.62655573701479,0.756037385752609,1.04544148007234,0.436725127492355,1.07891477107857,1.48776220305605,0,0,0,0,0,0.165458490457098,0,0,0,0,0,0,0,0,0,0,0.205421914329655,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.3885110557024,1.84130094602871,5.15605962095457,2.23409137046794,0.685082519770642,0.755393897389701,0.675022500231806,0.900642406448441,0.906284817968409,0,0.31136204275253,0.399024873401031,0.170733605754134,0,0.419226325255965,0.551530525350042,0.44449345560323,0.824140228955577,0.320919209591815,0,0.50695859978048,0,0.561849044819294,0.576226371643824,0.229741875822453,0.952587382566147,0.463537303779422,0,0,0.294397840268795,1.02860775715625,0.532427418478012,0.238436189947321,0.145346416632329,0.188218760830661,0.423073039458382,0.182927972872773,0.526139422875686,0.407412341537585,1.68342681497322,0.237270036248348,0.394017929502254,0,0.154936841185966,0.771626443924566,0.749431733813838,0.467863216890817,0.214871054048298,0.382576664137687,0.661774257358546,1.39120701372253 | |||
|short_description=p2@Gpr17 | |||
}} |
Revision as of 15:53, 13 September 2013
Short description: | p2@Gpr17 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Gpr17_5end |
Coexpression cluster: | MCL_coexpression_mm9:107 |
Association with transcript: | -78bp_to_ENSMUST00000064016, NM_001025381, uc008eiw.2_5end |
EntrezGene: | Gpr17 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
autonomic neuron | 4.02e-21 | 9 |
neuron | 1.39e-12 | 33 |
neuronal stem cell | 1.39e-12 | 33 |
neuroblast | 1.39e-12 | 33 |
electrically signaling cell | 1.39e-12 | 33 |
neural cell | 1.20e-11 | 43 |
ectodermal cell | 2.75e-11 | 44 |
neurectodermal cell | 2.75e-11 | 44 |
electrically responsive cell | 4.47e-10 | 39 |
electrically active cell | 4.47e-10 | 39 |
neuron of the ventral spinal cord | 8.47e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
autonomic nervous system | 4.02e-21 | 9 |
peripheral nervous system | 6.53e-17 | 11 |
central nervous system | 6.28e-15 | 73 |
nervous system | 2.34e-14 | 75 |
regional part of spinal cord | 4.29e-11 | 5 |
gray matter of spinal cord | 4.29e-11 | 5 |
ectoderm-derived structure | 5.09e-11 | 95 |
ectoderm | 5.09e-11 | 95 |
presumptive ectoderm | 5.09e-11 | 95 |
spinal cord | 3.57e-09 | 6 |
dorsal region element | 3.57e-09 | 6 |
dorsum | 3.57e-09 | 6 |
parasympathetic nervous system | 2.39e-08 | 3 |
posterior neural tube | 4.25e-08 | 12 |
chordal neural plate | 4.25e-08 | 12 |
sympathetic nervous system | 5.27e-08 | 3 |
neural crest-derived structure | 5.85e-08 | 3 |
neural crest | 5.85e-08 | 3 |
enteric nervous system | 5.85e-08 | 3 |
vagal neural crest | 5.85e-08 | 3 |
neural fold | 5.85e-08 | 3 |
neurectoderm | 6.87e-08 | 64 |
neural plate | 6.87e-08 | 64 |
presumptive neural plate | 6.87e-08 | 64 |
ventral horn of spinal cord | 8.47e-07 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.