FFCP PHASE1:Hg19::chr5:76383909..76383944,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA|HGNC=|TSSclassifier=S|UniProt=|association_with_transcript=4bp_to_ENST00000514288_5end|coexpression_cluster_id=C462|description=CAGE_peak_1_at_ENST00000514288_5end|id=chr5:76383909..76383944,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000990;1.05e-20;8!CL:0002619;2.01e-17;3!CL:0000451;7.60e-17;10!CL:0000235;1.74e-15;6!CL:0000453;8.71e-10;5!CL:0000147;2.12e-09;14!CL:0000148;7.20e-09;10!CL:0000840;8.28e-09;5!CL:0002138;1.23e-08;6!CL:0002567;2.18e-08;3|ontology_enrichment_celltype_v019_2=CL:0000990,1.09e-20,8;CL:0002619,1.85e-17,3;CL:0000451,7.84e-17,10;CL:0000235,1.74e-15,6;CL:0000763,1.49e-10,108;CL:0000049,1.49e-10,108;CL:0000453,8.86e-10,5;CL:0000147,2.40e-09,14;CL:0000557,3.02e-09,67;CL:0002194,5.18e-09,59;CL:0000576,5.18e-09,59;CL:0000040,5.18e-09,59;CL:0000559,5.18e-09,59;CL:0000148,8.08e-09,10;CL:0000541,8.08e-09,10;CL:0000840,8.40e-09,5;CL:0001029,8.40e-09,5;CL:0005020,1.18e-08,6;CL:0002138,1.18e-08,6;CL:0005022,1.18e-08,6;CL:0002009,1.18e-08,61;CL:0002567,2.15e-08,3;CL:0000839,7.50e-08,66;CL:0000766,4.90e-07,72|ontology_enrichment_development_v019=CL:0005022;1.23e-08;6|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!7.65e-15!115;UBERON:0001049!8.12e-11!57;UBERON:0005068!8.12e-11!57;UBERON:0006241!8.12e-11!57;UBERON:0007135!8.12e-11!57;UBERON:0005743!1.25e-10!86;UBERON:0000073!9.33e-10!94;UBERON:0001016!9.33e-10!94;UBERON:0002616!2.26e-09!59;UBERON:0001017!2.70e-09!82;UBERON:0000955!1.87e-08!69;UBERON:0006238!1.87e-08!69;UBERON:0003075!4.86e-08!86;UBERON:0007284!4.86e-08!86;UBERON:0003080!8.87e-08!42;UBERON:0002346!3.12e-07!90;UBERON:0002780!3.58e-07!41;UBERON:0001890!3.58e-07!41;UBERON:0006240!3.58e-07!41|ontology_enrichment_uberon_v019=UBERON:0002418;9.18e-08;3!UBERON:0004755;9.18e-08;3|ontology_enrichment_uberon_v019_2=UBERON:0001434,2.88e-10,100;UBERON:0004765,3.18e-10,90;UBERON:0001474,6.05e-10,82;UBERON:0002405,7.10e-10,93;UBERON:0002193,4.37e-08,108;UBERON:0002371,6.86e-08,76;UBERON:0002418,8.88e-08,3;UBERON:0004755,8.88e-08,3|phase1_expression=0,0.428201047781966,0.140954404095971,0,0,0,5.06599756336621,0,0.261185628199839,0.245733936501509,0,0,0,0.495065411840187,1.32558950291166,0,0,0,0,0.246242116153576,0,0,0.85870796139317,0.136874425072884,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0.587200878669695,0,0,0,5.82180233023803,3.88672399222775,9.78787157009909,0.145398238779565,0,0,0,0.822335776043652,0,0.28769239232215,0,0.236482229888585,0,0,0,0.376484679085209,0,0,0.306083892370903,0.320929027076094,0,0.329851300186716,0,0,0,0,0,0.251248665256743,0,0.434377689410233,0,0.368277635987565,0,0.211255286311942,0,0.209658645508376,0.44931452458598,0.300353785683013,1.12507910687956,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0.283604451492204,0,0,0.458426764241994,0,0,4.54366351116557,3.48259474598534,3.72282289452822,0,0,0,0.198762407366705,0,0,0,0,0,0,1.55050055501597,7.1153252537342,2.00832367658802,0,0,0,0.367663080345869,0,0.17859945656816,0.22452937262617,0.225222960966644,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122834317311768,0.206651562351531,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.609868530647977,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368965315629341,0,0,0,0,0,0,0,0,0,0,0,0,0.380508304469197,0,0,12.5570673104573,0.936017060556951,6.98566462757023,0,0,0,0,0,0,0,0,0,0,0,0.126995788584338,4.20187268114105,5.86087236050235,0,1.13110241973656,0.300343057843917,3.71574362419752,0,0,0,0,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.054170194371,10.5416969741516,0.239624855491583,0,0,0,0,0,0,0,0,0,0.508189248444927,0,0.773288812777695,0,0,0,0,0,0.36807447515742,0,0,0,0,0,0.117141414992713,0,0,0,0,0,0.0868836144680828,0.195801157462741,0,0.206768026122887,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15403067420883,0,0,0.105551628892876,0,0.170093705276516,0.215915916102139,0,0,0,0,0,0,0,0,0,1.31205858279882,0.650756789328606,0.309123034943167,0,0,0,0,0,0,0.154048617114644,0.15350367472613,0,0,0.290033387828457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.372158369359667,0,0,0,0.42793898803392,0,0,0,0.54907405947211,0.117812402345686,0,0,0,0,0,0,0.136499911407986,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0.427296284509893,0.962479855263359,0,0,0,0,0,0,0.191505370132367,1.90506224451495,1.29848776109822,0.561594356226918,0,0,0,0.169291777801603,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,2.93016358543788,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0.398495976502139,0,0,0.102268682502155,0,0,0,0.179021174675609,0,0.0986434056369336,0,0,0,0.556608588971108,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0.221158519862449,0.295547618953547,0.219385397153973,0,0,0.15390051700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| ||
|DPIdataset=robustDPI | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=4bp_to_ENST00000514288_5end | |||
|coexpression_cluster_id=C462 | |||
|description=CAGE_peak_1_at_ENST00000514288_5end | |||
|id=chr5:76383909..76383944,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000990;1.05e-20;8!CL:0002619;2.01e-17;3!CL:0000451;7.60e-17;10!CL:0000235;1.74e-15;6!CL:0000453;8.71e-10;5!CL:0000147;2.12e-09;14!CL:0000148;7.20e-09;10!CL:0000840;8.28e-09;5!CL:0002138;1.23e-08;6!CL:0002567;2.18e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000990,1.09e-20,8;CL:0002619,1.85e-17,3;CL:0000451,7.84e-17,10;CL:0000235,1.74e-15,6;CL:0000763,1.49e-10,108;CL:0000049,1.49e-10,108;CL:0000453,8.86e-10,5;CL:0000147,2.40e-09,14;CL:0000557,3.02e-09,67;CL:0002194,5.18e-09,59;CL:0000576,5.18e-09,59;CL:0000040,5.18e-09,59;CL:0000559,5.18e-09,59;CL:0000148,8.08e-09,10;CL:0000541,8.08e-09,10;CL:0000840,8.40e-09,5;CL:0001029,8.40e-09,5;CL:0005020,1.18e-08,6;CL:0002138,1.18e-08,6;CL:0005022,1.18e-08,6;CL:0002009,1.18e-08,61;CL:0002567,2.15e-08,3;CL:0000839,7.50e-08,66;CL:0000766,4.90e-07,72 | |||
|ontology_enrichment_development_v019=CL:0005022;1.23e-08;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!7.65e-15!115;UBERON:0001049!8.12e-11!57;UBERON:0005068!8.12e-11!57;UBERON:0006241!8.12e-11!57;UBERON:0007135!8.12e-11!57;UBERON:0005743!1.25e-10!86;UBERON:0000073!9.33e-10!94;UBERON:0001016!9.33e-10!94;UBERON:0002616!2.26e-09!59;UBERON:0001017!2.70e-09!82;UBERON:0000955!1.87e-08!69;UBERON:0006238!1.87e-08!69;UBERON:0003075!4.86e-08!86;UBERON:0007284!4.86e-08!86;UBERON:0003080!8.87e-08!42;UBERON:0002346!3.12e-07!90;UBERON:0002780!3.58e-07!41;UBERON:0001890!3.58e-07!41;UBERON:0006240!3.58e-07!41 | |||
|ontology_enrichment_uberon_v019=UBERON:0002418;9.18e-08;3!UBERON:0004755;9.18e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001434,2.88e-10,100;UBERON:0004765,3.18e-10,90;UBERON:0001474,6.05e-10,82;UBERON:0002405,7.10e-10,93;UBERON:0002193,4.37e-08,108;UBERON:0002371,6.86e-08,76;UBERON:0002418,8.88e-08,3;UBERON:0004755,8.88e-08,3 | |||
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| |||
|short_description=p1@ENST00000514288 | |||
}} |
Revision as of 16:29, 13 September 2013
Short description: | p1@ENST00000514288 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_ENST00000514288_5end |
Coexpression cluster: | C462_CD14_Monocytederived_Macrophage_Hepatic_Dendritic_lung_adipose |
Association with transcript: | 4bp_to_ENST00000514288_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
conventional dendritic cell | 1.09e-20 | 8 |
adult endothelial progenitor cell | 1.85e-17 | 3 |
dendritic cell | 7.84e-17 | 10 |
macrophage | 1.74e-15 | 6 |
myeloid cell | 1.49e-10 | 108 |
common myeloid progenitor | 1.49e-10 | 108 |
Langerhans cell | 8.86e-10 | 5 |
pigment cell | 2.40e-09 | 14 |
granulocyte monocyte progenitor cell | 3.02e-09 | 67 |
monopoietic cell | 5.18e-09 | 59 |
monocyte | 5.18e-09 | 59 |
monoblast | 5.18e-09 | 59 |
promonocyte | 5.18e-09 | 59 |
melanocyte | 8.08e-09 | 10 |
melanoblast | 8.08e-09 | 10 |
immature conventional dendritic cell | 8.40e-09 | 5 |
common dendritic progenitor | 8.40e-09 | 5 |
lymphangioblast | 1.18e-08 | 6 |
endothelial cell of lymphatic vessel | 1.18e-08 | 6 |
vascular lymphangioblast | 1.18e-08 | 6 |
macrophage dendritic cell progenitor | 1.18e-08 | 61 |
light melanocyte | 2.15e-08 | 3 |
myeloid lineage restricted progenitor cell | 7.50e-08 | 66 |
myeloid leukocyte | 4.90e-07 | 72 |
Ontology term | p-value | n |
---|---|---|
skeletal system | 2.88e-10 | 100 |
skeletal element | 3.18e-10 | 90 |
bone element | 6.05e-10 | 82 |
immune system | 7.10e-10 | 93 |
hemolymphoid system | 4.37e-08 | 108 |
bone marrow | 6.86e-08 | 76 |
cartilage tissue | 8.88e-08 | 3 |
skeletal tissue | 8.88e-08 | 3 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.