FFCP PHASE1:Hg19::chr5:89797743..89797759,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C2832|description=CAGE_peak_at_chr5:89797743..89797759,+|id=chr5:89797743..89797759,+|ontology_enrichment_celltype=CL:0000066!4.48e-07!254|ontology_enrichment_celltype_v019=CL:0002322;9.18e-11;5|ontology_enrichment_celltype_v019_2=CL:0002322,9.61e-11,5|ontology_enrichment_development_v019=UBERON:0009117;4.56e-07;10!UBERON:0005564;4.56e-07;10|ontology_enrichment_disease=DOID:14566!2.54e-19!239;DOID:162!1.20e-18!235;DOID:2531!1.19e-09!51;DOID:0060083!1.19e-09!51;DOID:0050687!4.14e-09!143;DOID:1240!4.03e-08!39;DOID:305!4.33e-07!106;DOID:0050686!6.34e-07!137|ontology_enrichment_disease_v019=DOID:1240;7.44e-11;39!DOID:2531;6.94e-10;51!DOID:0060083;6.94e-10;51!DOID:8692;5.66e-09;31|ontology_enrichment_disease_v019_2=DOID:2531,1.44e-14,51;DOID:0060083,1.44e-14,51;DOID:1240,1.49e-12,39;DOID:14566,1.71e-10,239;DOID:162,2.07e-10,235;DOID:8692,7.46e-09,31;DOID:0050686,5.28e-07,137|ontology_enrichment_uberon=UBERON:0001049!6.95e-12!57;UBERON:0005068!6.95e-12!57;UBERON:0006241!6.95e-12!57;UBERON:0007135!6.95e-12!57;UBERON:0003080!3.67e-10!42;UBERON:0002780!7.31e-10!41;UBERON:0001890!7.31e-10!41;UBERON:0006240!7.31e-10!41;UBERON:0001017!1.93e-09!82;UBERON:0002616!3.41e-09!59;UBERON:0002020!6.63e-09!34;UBERON:0003528!6.63e-09!34;UBERON:0002346!6.93e-09!90;UBERON:0000955!1.45e-08!69;UBERON:0006238!1.45e-08!69;UBERON:0003075!1.72e-08!86;UBERON:0007284!1.72e-08!86;UBERON:0005743!1.99e-08!86;UBERON:0000073!3.89e-08!94;UBERON:0001016!3.89e-08!94;UBERON:0001893!5.52e-08!34;UBERON:0002791!8.96e-08!33;UBERON:0001869!9.88e-08!32;UBERON:0003056!4.66e-07!61|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0001049,6.69e-07,56;UBERON:0005068,6.69e-07,56;UBERON:0006241,6.69e-07,56;UBERON:0007135,6.69e-07,56|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0.245733936501509,0.697801167972428,0.218441372130172,0.263766978228454,0,0.331397375727916,0.672325146451775,0,0.730310090387373,0,0,0,0,0,0.547497700291537,0.125542639594803,1.98674854944673,1.14940825229924,1.41679406364623,0,0,0,0.919421224478927,0.30120591877825,0,0.92960640696362,1.84820002233648,0,0,0.401088894940283,0.651032612147555,0,0,0,0.145398238779565,0,0,0.232429036905685,0,0.309706370895104,0,0,0,0,0,0,0.188242339542605,0,0,0,0,0.639337125799041,0,0.199463657621632,0,0.580418477257168,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182664153764634,0,0,0,0,0.400395987036012,0,0,0,0,0,0,1.32171328579026,0,0,0,0.393010762749165,0.205601498999509,0.167186495390678,0,0,0,0,0,0,0,0.128091319725675,0.130059347559878,0,0,0,0.14828656316206,0,0,0.226618685395132,0,0,0,0,0,0,0,0,0,0.236777252044017,0,0.201606743224732,0.534880391567015,0.289648807765598,0,0.670700859703636,0.12786256184353,0,0,0.289693037921647,0,0,0.0945348171640679,0.665188192387692,0.263504357079378,0.327447688744282,0,0.370784442784429,0,0,0,0,0,0,0.198762407366705,0,0,0,0,0.275118041940067,0,0.258416759169329,0,0,0,0.760272105718513,0.976248230192678,0.367663080345869,0.81014194788176,0.17859945656816,1.12264686313085,0.563057402416611,0,0,0.366403487860815,0,0,0.436094052142534,0,0,0.264818361626438,0,0.354668382198357,0,0,0,0,0.269421344139376,0.326923806226917,0,0,0,0.312160076830321,0,0.597794722207204,0.352303495931295,0,0.561803226808994,0,0.122834317311768,0,0,0.494533858557114,0,0,0.168336113954066,0.375355559615893,0,0,0,0,0.226864366320042,0.358779271377724,0,0.211931901159562,0,0.206105058476878,0,0,0.337552664482532,0.0974370051611986,0,0.0920498986422993,0,0,0.10075209822764,0.169560592310488,0,0,0.860413786167011,5.00092195131341,5.69878003782387,3.60201222895507,3.21349270547648,9.33587148239825,6.56959246336494,0,0,0,0,0,0.236613600079688,0.505754070234305,1.20505514941741,0.220587945464788,0.435758888184812,0.949082476444386,0.674156540800822,0.196221465125346,0,0,0,0,0,0,0,2.95394953340702,0,0,0.171567810298526,0.658501712451753,0,3.11639814476056,0.555530670951178,0,0,1.44331342025273,0.231860809950154,0,0,0,1.14152491340759,0,0,0,0,0.148631162288728,0,0.671928512795438,0.708875486211932,0.268675568108545,0.871901815541886,0,0,0,0.207328115540772,0.144119953416961,0,0.888970520090367,0.763976851116555,0,0,1.7480673759565,3.30377363628309,0.857479297891735,0.112131084345361,0,0.2933531432838,0,0,4.22651376278,0.26593811658487,0,0,0,0,0.428933980974443,0,0,0,0.355391948742546,1.58390374586686,0,0,0.599837947092342,1.2162378064119,0.502257091432126,0,0,0,0,0.289562613335158,0,0,1.90544744788996,0,0,0.128343036279748,0.254094624222463,0,0,0,0,0,0,0,0.24538298343828,0.500170521059677,0,0.415941723061614,0.535286966391485,0.788512075169673,0,0,0,0,0.664225598535437,0,0.260650843404249,0,0,0,0,0,0,0,0,0,0.153461973288062,0.280660094433074,0.128139149255701,0,0,0,1.23367755042124,0,0.0821271560138091,0.519254429183621,0.348631135379878,0.120859449591622,0.802025881213139,2.1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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C2832 | |||
|description=CAGE_peak_at_chr5:89797743..89797759,+ | |||
|id=chr5:89797743..89797759,+ | |||
|ontology_enrichment_celltype=CL:0000066!4.48e-07!254 | |||
|ontology_enrichment_celltype_v019=CL:0002322;9.18e-11;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,9.61e-11,5 | |||
|ontology_enrichment_development_v019=UBERON:0009117;4.56e-07;10!UBERON:0005564;4.56e-07;10 | |||
|ontology_enrichment_disease=DOID:14566!2.54e-19!239;DOID:162!1.20e-18!235;DOID:2531!1.19e-09!51;DOID:0060083!1.19e-09!51;DOID:0050687!4.14e-09!143;DOID:1240!4.03e-08!39;DOID:305!4.33e-07!106;DOID:0050686!6.34e-07!137 | |||
|ontology_enrichment_disease_v019=DOID:1240;7.44e-11;39!DOID:2531;6.94e-10;51!DOID:0060083;6.94e-10;51!DOID:8692;5.66e-09;31 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,1.44e-14,51;DOID:0060083,1.44e-14,51;DOID:1240,1.49e-12,39;DOID:14566,1.71e-10,239;DOID:162,2.07e-10,235;DOID:8692,7.46e-09,31;DOID:0050686,5.28e-07,137 | |||
|ontology_enrichment_uberon=UBERON:0001049!6.95e-12!57;UBERON:0005068!6.95e-12!57;UBERON:0006241!6.95e-12!57;UBERON:0007135!6.95e-12!57;UBERON:0003080!3.67e-10!42;UBERON:0002780!7.31e-10!41;UBERON:0001890!7.31e-10!41;UBERON:0006240!7.31e-10!41;UBERON:0001017!1.93e-09!82;UBERON:0002616!3.41e-09!59;UBERON:0002020!6.63e-09!34;UBERON:0003528!6.63e-09!34;UBERON:0002346!6.93e-09!90;UBERON:0000955!1.45e-08!69;UBERON:0006238!1.45e-08!69;UBERON:0003075!1.72e-08!86;UBERON:0007284!1.72e-08!86;UBERON:0005743!1.99e-08!86;UBERON:0000073!3.89e-08!94;UBERON:0001016!3.89e-08!94;UBERON:0001893!5.52e-08!34;UBERON:0002791!8.96e-08!33;UBERON:0001869!9.88e-08!32;UBERON:0003056!4.66e-07!61 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,6.69e-07,56;UBERON:0005068,6.69e-07,56;UBERON:0006241,6.69e-07,56;UBERON:0007135,6.69e-07,56 | |||
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| |||
|short_description=p@chr5:89797743..89797759,+ | |||
}} |
Revision as of 16:51, 13 September 2013
Short description: | p@chr5:89797743..89797759, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr5:89797743..89797759, + |
Coexpression cluster: | C2832_iPS_mesothelioma_testicular_teratocarcinoma_H9_HES3GFP_giant |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 9.61e-11 | 5 |
Ontology term | p-value | n |
---|---|---|
neural tube | 6.69e-07 | 56 |
neural rod | 6.69e-07 | 56 |
future spinal cord | 6.69e-07 | 56 |
neural keel | 6.69e-07 | 56 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 1.44e-14 | 51 |
immune system cancer | 1.44e-14 | 51 |
leukemia | 1.49e-12 | 39 |
disease of cellular proliferation | 1.71e-10 | 239 |
cancer | 2.07e-10 | 235 |
myeloid leukemia | 7.46e-09 | 31 |
organ system cancer | 5.28e-07 | 137 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.