FFCP PHASE1:Hg19::chr5:96294131..96294142,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=4012|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=6656|TSSclassifier=S|UniProt=|association_with_transcript=-12bp_to_ENST00000395770_5end|description=CAGE_peak_15_at_LNPEP_5end|id=chr5:96294131..96294142,+|ontology_enrichment_celltype=CL:0002057!1.81e-26!42;CL:0000860!2.33e-24!45;CL:0002194!1.39e-21!63;CL:0000576!1.39e-21!63;CL:0000040!1.39e-21!63;CL:0000559!1.39e-21!63;CL:0002009!9.49e-21!65;CL:0000839!7.14e-19!70;CL:0000766!8.87e-19!76;CL:0000557!1.57e-18!71;CL:0002087!1.97e-17!119;CL:0002031!1.96e-16!124;CL:0000738!5.62e-15!140;CL:0002032!8.04e-15!165;CL:0000837!8.04e-15!165;CL:0000763!1.29e-14!112;CL:0000049!1.29e-14!112;CL:0000037!6.94e-14!172;CL:0000566!6.94e-14!172;CL:0002393!7.05e-13!9;CL:0002397!7.05e-13!9;CL:0000988!1.12e-12!182;CL:0000875!3.91e-11!3;CL:0002396!3.91e-11!3|ontology_enrichment_celltype_v019=CL:0000945;5.58e-09;24!CL:0000875;1.35e-08;3!CL:0002396;1.35e-08;3|ontology_enrichment_celltype_v019_2=CL:0000945,5.73e-09,24;CL:0000826,5.73e-09,24;CL:0000875,1.40e-08,3;CL:0002396,1.40e-08,3|ontology_enrichment_development_v019=UBERON:0003124;1.07e-23;1!UBERON:0001045;4.59e-23;1|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:0060058;1.37e-20;10|ontology_enrichment_disease_v019_2=DOID:0060058,1.47e-20,10|ontology_enrichment_uberon=UBERON:0002390!2.09e-16!102;UBERON:0003061!2.09e-16!102;UBERON:0002371!7.98e-16!80;UBERON:0002193!8.85e-16!112;UBERON:0001474!2.45e-14!86;UBERON:0002405!7.62e-14!115;UBERON:0004765!2.10e-11!101;UBERON:0001434!2.10e-11!101;UBERON:0003081!5.17e-07!216|ontology_enrichment_uberon_v019=UBERON:0001154;4.59e-23;1!UBERON:0001153;4.59e-23;1!UBERON:0009854;4.59e-23;1!UBERON:0001987;6.50e-07;4!UBERON:0009856;9.36e-07;4|ontology_enrichment_uberon_v019_2=UBERON:0001154,6.40e-23,1;UBERON:0001153,6.40e-23,1;UBERON:0001045,6.40e-23,1;UBERON:0001987,6.50e-07,4;UBERON:0004340,6.50e-07,4|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.786728553697808,0,0,0,0,0,3.17615522379237,2.13253848731132,0,0,0,0,0,0,0,0.145398238779565,0,0.242584061187816,0,0,0,0.863077176966451,0,0.709446689665756,0.344745680736619,0,0,0,0,0.224723484445085,0.306083892370903,0,0,0,0.398927315243264,0.426224750532694,0,0,0,0.251248665256743,0.521482918420201,0.434377689410233,0,0,0.316462387440884,0.211255286311942,0.212604299965044,0.419317291016752,0,0.150176892841506,0,0.285012743741249,0.59675003159727,1.27864907635244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.411202997999018,0,0,0.946895611469467,0,0,0,0,0.270803863765016,0,0.130059347559878,0,0,0,0,0.267540828089713,0,0,0,0,0.506039384039006,0,0,0,0.301150238155546,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0.664789802594326,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.702012795417713,0.297262324577456,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112085143993527,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.33953315142039,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.88287601553558,0,0,0,0,0,0,0.569647187174163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.842391534340376,0,0,0,0,0.1605880751037,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439524537815682,0,0,0,0,0,0,0,0,0,0,0,0,1.10513566212459,0,0,0.246169610922139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.470940769185074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171086837884329,0,0.320362237703084,0,0,0,0,3.28840015628419,0,0,3.5096585163178,0.919036730290385,0.655745261419609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,4.16901139764402,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128915775947154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0,0.129177819672012,0,0,0,0,0,0,0.875576689189638,0.0717222053926763,0,0,0,0,0,0,0,0,0,0.402547587182052,0|short_description=p15@LNPEP}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=4012 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6656 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=-12bp_to_ENST00000395770_5end | |||
|description=CAGE_peak_15_at_LNPEP_5end | |||
|id=chr5:96294131..96294142,+ | |||
|ontology_enrichment_celltype=CL:0002057!1.81e-26!42;CL:0000860!2.33e-24!45;CL:0002194!1.39e-21!63;CL:0000576!1.39e-21!63;CL:0000040!1.39e-21!63;CL:0000559!1.39e-21!63;CL:0002009!9.49e-21!65;CL:0000839!7.14e-19!70;CL:0000766!8.87e-19!76;CL:0000557!1.57e-18!71;CL:0002087!1.97e-17!119;CL:0002031!1.96e-16!124;CL:0000738!5.62e-15!140;CL:0002032!8.04e-15!165;CL:0000837!8.04e-15!165;CL:0000763!1.29e-14!112;CL:0000049!1.29e-14!112;CL:0000037!6.94e-14!172;CL:0000566!6.94e-14!172;CL:0002393!7.05e-13!9;CL:0002397!7.05e-13!9;CL:0000988!1.12e-12!182;CL:0000875!3.91e-11!3;CL:0002396!3.91e-11!3 | |||
|ontology_enrichment_celltype_v019=CL:0000945;5.58e-09;24!CL:0000875;1.35e-08;3!CL:0002396;1.35e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,5.73e-09,24;CL:0000826,5.73e-09,24;CL:0000875,1.40e-08,3;CL:0002396,1.40e-08,3 | |||
|ontology_enrichment_development_v019=UBERON:0003124;1.07e-23;1!UBERON:0001045;4.59e-23;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060058;1.37e-20;10 | |||
|ontology_enrichment_disease_v019_2=DOID:0060058,1.47e-20,10 | |||
|ontology_enrichment_uberon=UBERON:0002390!2.09e-16!102;UBERON:0003061!2.09e-16!102;UBERON:0002371!7.98e-16!80;UBERON:0002193!8.85e-16!112;UBERON:0001474!2.45e-14!86;UBERON:0002405!7.62e-14!115;UBERON:0004765!2.10e-11!101;UBERON:0001434!2.10e-11!101;UBERON:0003081!5.17e-07!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0001154;4.59e-23;1!UBERON:0001153;4.59e-23;1!UBERON:0009854;4.59e-23;1!UBERON:0001987;6.50e-07;4!UBERON:0009856;9.36e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001154,6.40e-23,1;UBERON:0001153,6.40e-23,1;UBERON:0001045,6.40e-23,1;UBERON:0001987,6.50e-07,4;UBERON:0004340,6.50e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.786728553697808,0,0,0,0,0,3.17615522379237,2.13253848731132,0,0,0,0,0,0,0,0.145398238779565,0,0.242584061187816,0,0,0,0.863077176966451,0,0.709446689665756,0.344745680736619,0,0,0,0,0.224723484445085,0.306083892370903,0,0,0,0.398927315243264,0.426224750532694,0,0,0,0.251248665256743,0.521482918420201,0.434377689410233,0,0,0.316462387440884,0.211255286311942,0.212604299965044,0.419317291016752,0,0.150176892841506,0,0.285012743741249,0.59675003159727,1.27864907635244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.411202997999018,0,0,0.946895611469467,0,0,0,0,0.270803863765016,0,0.130059347559878,0,0,0,0,0.267540828089713,0,0,0,0,0.506039384039006,0,0,0,0.301150238155546,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0.664789802594326,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.702012795417713,0.297262324577456,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112085143993527,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.33953315142039,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.88287601553558,0,0,0,0,0,0,0.569647187174163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.842391534340376,0,0,0,0,0.1605880751037,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439524537815682,0,0,0,0,0,0,0,0,0,0,0,0,1.10513566212459,0,0,0.246169610922139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.470940769185074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171086837884329,0,0.320362237703084,0,0,0,0,3.28840015628419,0,0,3.5096585163178,0.919036730290385,0.655745261419609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,4.16901139764402,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128915775947154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0,0.129177819672012,0,0,0,0,0,0,0.875576689189638,0.0717222053926763,0,0,0,0,0,0,0,0,0,0.402547587182052,0 | |||
|short_description=p15@LNPEP | |||
}} |
Revision as of 17:02, 13 September 2013
Short description: | p15@LNPEP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_15_at_LNPEP_5end |
Coexpression cluster: | NA |
Association with transcript: | -12bp_to_ENST00000395770_5end |
EntrezGene: | LNPEP |
HGNC: | 6656 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 5.73e-09 | 24 |
pro-B cell | 5.73e-09 | 24 |
non-classical monocyte | 1.40e-08 | 3 |
CD14-low, CD16-positive monocyte | 1.40e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
vermiform appendix | 6.40e-23 | 1 |
caecum | 6.40e-23 | 1 |
midgut | 6.40e-23 | 1 |
placenta | 6.50e-07 | 4 |
allantois | 6.50e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 1.47e-20 | 10 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.