FFCP PHASE1:Mm9::chr19:11715293..11715298,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=170813|HGNC=|MCL_coexpression_id=130|UniProt=Q920C4,Q53ZU3,Q3TYT4|association_with_transcript=25bp_to_ENSMUST00000112984,NM_133246,uc008gsp.1,uc008gsq.1,uc008gsr.1_5end|description=CAGE_peak_5_at_Ms4a3_5end|id=chr19:11715293..11715298,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000049,6.08e-12,19;CL:0000557,4.32e-09,7;CL:0000988,6.04e-07,32;CL:0002032,6.04e-07,32;CL:0000037,6.04e-07,32;CL:0000837,6.04e-07,32;CL:0000355,6.87e-07,9|ontology_enrichment_disease=DOID:0060100!3.87e-08!3;DOID:4045!3.87e-08!3|ontology_enrichment_disease_v019_2=DOID:0060100,1.49e-19,3;DOID:4045,1.49e-19,3;DOID:0050686,4.42e-10,6|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0002204,2.76e-09,32;UBERON:0001134,6.87e-07,9;UBERON:0002036,6.87e-07,9;UBERON:0002385,6.87e-07,9;UBERON:0000486,6.87e-07,9;UBERON:0007503,6.87e-07,9;UBERON:0001015,6.87e-07,9;UBERON:0002329,6.87e-07,9;UBERON:0003082,6.87e-07,9;UBERON:0003059,6.87e-07,9;UBERON:0007282,6.87e-07,9;UBERON:0004290,6.87e-07,9;UBERON:0009618,6.87e-07,9|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.51118978442145,7.0320181007142,4.18818995179039,5.29408339227913,4.09827290975067,3.39857247121808,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.461230994512117,0,0,0,0,0,2.65383165584962,0,0,0.484875253135222,0,0,0,0,1.55759661857696,4.79922184794726,5.71816021828791,0,0,0,0,0,0,0,0,0.497627882440372,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.91549231119264,10.5512641917033,14.2081749697796,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224862112384854,0,0.241177159752417,1.2731292589071,0.575392274901621,0.486405680325106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.504941854408746,0,0,0,0,0,0,0,0,0,0,0,0.178065603667255,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.683483523191411,0,0.370389054739423,0,0,0.228778173206523,0.339956859987711,0,0.552799895217695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0.222246727801615,0,0,0,0.25347929989024,0,0.187283014939765,0,0,0,0,0,0,0,0,0,0,0,0.0941093804153306,0,0,0,0.135804113845862,0,0,0.0985044823755635,0,0,0.192906610981141,0,0.233931608445408,0,0,0.220591419119515,0.231867835620421|short_description=p5@Ms4a3}} | ||
|EntrezGene=170813 | |||
|HGNC= | |||
|MCL_coexpression_id=130 | |||
|UniProt=Q920C4,Q53ZU3,Q3TYT4 | |||
|association_with_transcript=25bp_to_ENSMUST00000112984,NM_133246,uc008gsp.1,uc008gsq.1,uc008gsr.1_5end | |||
|description=CAGE_peak_5_at_Ms4a3_5end | |||
|id=chr19:11715293..11715298,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000049,6.08e-12,19;CL:0000557,4.32e-09,7;CL:0000988,6.04e-07,32;CL:0002032,6.04e-07,32;CL:0000037,6.04e-07,32;CL:0000837,6.04e-07,32;CL:0000355,6.87e-07,9 | |||
|ontology_enrichment_disease=DOID:0060100!3.87e-08!3;DOID:4045!3.87e-08!3 | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,1.49e-19,3;DOID:4045,1.49e-19,3;DOID:0050686,4.42e-10,6 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002204,2.76e-09,32;UBERON:0001134,6.87e-07,9;UBERON:0002036,6.87e-07,9;UBERON:0002385,6.87e-07,9;UBERON:0000486,6.87e-07,9;UBERON:0007503,6.87e-07,9;UBERON:0001015,6.87e-07,9;UBERON:0002329,6.87e-07,9;UBERON:0003082,6.87e-07,9;UBERON:0003059,6.87e-07,9;UBERON:0007282,6.87e-07,9;UBERON:0004290,6.87e-07,9;UBERON:0009618,6.87e-07,9 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.51118978442145,7.0320181007142,4.18818995179039,5.29408339227913,4.09827290975067,3.39857247121808,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.461230994512117,0,0,0,0,0,2.65383165584962,0,0,0.484875253135222,0,0,0,0,1.55759661857696,4.79922184794726,5.71816021828791,0,0,0,0,0,0,0,0,0.497627882440372,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.91549231119264,10.5512641917033,14.2081749697796,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224862112384854,0,0.241177159752417,1.2731292589071,0.575392274901621,0.486405680325106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.504941854408746,0,0,0,0,0,0,0,0,0,0,0,0.178065603667255,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.683483523191411,0,0.370389054739423,0,0,0.228778173206523,0.339956859987711,0,0.552799895217695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0.222246727801615,0,0,0,0.25347929989024,0,0.187283014939765,0,0,0,0,0,0,0,0,0,0,0,0.0941093804153306,0,0,0,0.135804113845862,0,0,0.0985044823755635,0,0,0.192906610981141,0,0.233931608445408,0,0,0.220591419119515,0.231867835620421 | |||
|short_description=p5@Ms4a3 | |||
}} |
Revision as of 17:04, 13 September 2013
Short description: | p5@Ms4a3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Ms4a3_5end |
Coexpression cluster: | MCL_coexpression_mm9:130 |
Association with transcript: | 25bp_to_ENSMUST00000112984, NM_133246, uc008gsp.1, uc008gsq.1, uc008gsr.1_5end |
EntrezGene: | Ms4a3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
common myeloid progenitor | 6.08e-12 | 19 |
granulocyte monocyte progenitor cell | 4.32e-09 | 7 |
hematopoietic cell | 6.04e-07 | 32 |
hematopoietic oligopotent progenitor cell | 6.04e-07 | 32 |
hematopoietic stem cell | 6.04e-07 | 32 |
hematopoietic multipotent progenitor cell | 6.04e-07 | 32 |
multi-potent skeletal muscle stem cell | 6.87e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system | 2.76e-09 | 32 |
skeletal muscle tissue | 6.87e-07 | 9 |
striated muscle tissue | 6.87e-07 | 9 |
muscle tissue | 6.87e-07 | 9 |
multilaminar epithelium | 6.87e-07 | 9 |
epithelial vesicle | 6.87e-07 | 9 |
musculature | 6.87e-07 | 9 |
somite | 6.87e-07 | 9 |
myotome | 6.87e-07 | 9 |
presomitic mesoderm | 6.87e-07 | 9 |
presumptive segmental plate | 6.87e-07 | 9 |
dermomyotome | 6.87e-07 | 9 |
trunk paraxial mesoderm | 6.87e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 1.49e-19 | 3 |
muscle cancer | 1.49e-19 | 3 |
organ system cancer | 4.42e-10 | 6 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.