FFCP PHASE1:Mm9::chr19:32694487..32694521,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=23972|HGNC=|MCL_coexpression_id=8|UniProt=O88428|association_with_transcript=0bp_to_ENSMUST00000025833,NM_011864,uc008hfm.1,uc008hfn.1_5end|description=CAGE_peak_2_at_Papss2_5end|id=chr19:32694487..32694521,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002107!2.52e-11!22;UBERON:0007499!2.52e-11!22;UBERON:0006925!2.52e-11!22;UBERON:0009497!2.52e-11!22;UBERON:0000015!2.52e-11!22;UBERON:0002423!2.52e-11!22;UBERON:0006235!2.52e-11!22;UBERON:0008835!2.52e-11!22;UBERON:0003894!2.52e-11!22;UBERON:0004161!2.52e-11!22;UBERON:0008836!2.52e-11!22;UBERON:0002365!4.76e-11!25;UBERON:0002330!4.76e-11!25;UBERON:0009854!2.12e-10!23;UBERON:0009856!2.12e-10!23;UBERON:0005057!2.28e-08!51;UBERON:0005172!9.15e-08!49;UBERON:0005173!9.15e-08!49;UBERON:0002417!9.15e-08!49;UBERON:0000916!9.15e-08!49;UBERON:0000475!1.31e-07!200|ontology_enrichment_uberon_v019_2=UBERON:0002365,1.25e-14,25;UBERON:0002330,1.25e-14,25;UBERON:0002107,1.29e-14,22;UBERON:0007499,1.29e-14,22;UBERON:0006925,1.29e-14,22;UBERON:0009497,1.29e-14,22;UBERON:0000015,1.29e-14,22;UBERON:0002423,1.29e-14,22;UBERON:0006235,1.29e-14,22;UBERON:0008835,1.29e-14,22;UBERON:0003894,1.29e-14,22;UBERON:0004161,1.29e-14,22;UBERON:0008836,1.29e-14,22;UBERON:0009854,1.09e-13,23;UBERON:0009856,1.09e-13,23;UBERON:0003929,1.74e-09,55;UBERON:0002368,2.91e-09,60;UBERON:0002530,3.90e-09,65;UBERON:0005172,2.07e-08,49;UBERON:0005173,2.07e-08,49;UBERON:0002417,2.07e-08,49;UBERON:0000916,2.07e-08,49;UBERON:0002021,4.17e-08,10;UBERON:0000411,4.17e-08,10;UBERON:0001950,4.17e-08,10;UBERON:0000073,6.01e-08,54;UBERON:0000025,1.21e-07,114;UBERON:0001049,8.16e-07,52;UBERON:0005068,8.16e-07,52;UBERON:0006241,8.16e-07,52;UBERON:0007135,8.16e-07,52|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,19.9851731855014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436050312760893,0,0,0,0,0,0,0,0,0,0,0.404632921719196,0,0,0,0,0,0,0,0,0,0,0,0,1.42825492201902,1.54607978666129,0,0.191690942036473,0,8.8092704799511,5.87361755191863,7.68032666281217,0.131886287730194,0.0914876436024097,0.52091337055676,3.07101298901519,8.4414391504752,6.72312290217964,2.65165726926301,0.854230084794618,0.372798891650601,0,0,0.579728977403356,96.3674742219153,40.1183086887573,63.1452734216246,134.503718411668,185.0351043712,57.8631010942818,0,0,0,0.422530259330042,0,0,0,0,0,0,89.7485294591811,0,1.1875371125186,0,0,0.230615497256059,0.452167921657868,0.705532242814229,1.88499886994513,0,7.66376591675532,0,0,0,0,0,3.51336956413857,1.8850203613211,0,0,0,0,10.1857634795279,13.2675174817402,0.628271760564322,7.99591872884472,4.09144731728529,7.2725815595846,6.65189178577806,0,0.373220911830279,0,0,0,0,0,0.30140963567143,0,0,0,0.517406741478031,0,0.189106080167819,0.351902248327898,0.219195732427575,0,0,0.205782136407943,0,0,0,0,0,0,0,0,0,0.154267112887378,0,0,0.116765342367169,0,0,0.162137619091711,0,0.219550115291051,0.134206418760372,13.6688466566683,0.514523061896422,0,0,0,0,0.128867461322093,0,0,0.190225626112559,0,0,0.251335208800269,0,0,0,0,0.398282546508734,0,0,0,0,0.969762435838129,2.31448205638051,20.4254014911351,125.321015634682,122.773005171955,173.249618146208,232.418859636325,0,0.196558995113203,0,1.01430060694251,5.788251834058,9.42115651591253,14.6725030099913,61.7735214012885,29.3780712111247,89.1362880469598,84.1038541730818,125.127106918939,251.063404679429,265.687569425952,216.134697570788,0,0,0,0,0,0.167506257441816,0.238043640886014,0,0,0,0.159454768657487,0.327726629431476,0,0,0,0,1.96705709207614,1.37968373152366,7.54587772942622,7.2671245687166,0,1.51482556322624,0.315508219416257,0,0,0,0,0,0,0,0,5.78378369559253,0.425820255624806,0.178065603667255,0,0.329940245945071,0,0.242780636154981,0.302323556964751,0.377210159511796,0.590603785761546,0.614870295887855,0.516856586336442,0.363533729477506,0.712994756769443,0.948110273807448,0,0,0,0,0,0,0,0,0,0,0,0,0,0.98931751764888,0.161464426695906,0,0.238744688006273,0,0.291480836629851,5.00648315428376,0.170870880797853,0,0,0,0.136694227721025,0.457556346413045,0,0,0,2.86401185404534,0,0,0,0,0,0.809186078308924,4.05001933054146,0,0,0,0,0,0.165458490457098,0.388902376688095,0.387479470433193,0.168956125490778,0.234714477291508,0.651021924219751,0,0.241584120826006,0.288030006257865,4.4241556887945,0.202725215290164,0.718976700153791,2.07873316764472,3.04345382634718,1.58945083825012,1.20195449519969,2.21534290761866,1.71642964911851,1.67654974641,2.62148081355785,3.8983152295901,2.11666051608725,3.3894301632655,0,0,0,0,0.772758376128762,0,0,0,0,2.25900737046827,4.14292712856459,2.29158205375759,3.60891682921744,3.42541259885321,2.2661816921691,4.72515750162264,6.30449684513909,5.89085131679466,5.1776031175182,0,0,0,0.729320151204882,0,2.75765262675021,1.33348036680969,1.64828045791115,0.962757628775446,0.758091635291392,1.2673964994512,0.754505365544305,1.03005658216871,0.832326981263301,0.976402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| ||
|EntrezGene=23972 | |||
|HGNC= | |||
|MCL_coexpression_id=8 | |||
|UniProt=O88428 | |||
|association_with_transcript=0bp_to_ENSMUST00000025833,NM_011864,uc008hfm.1,uc008hfn.1_5end | |||
|description=CAGE_peak_2_at_Papss2_5end | |||
|id=chr19:32694487..32694521,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!2.52e-11!22;UBERON:0007499!2.52e-11!22;UBERON:0006925!2.52e-11!22;UBERON:0009497!2.52e-11!22;UBERON:0000015!2.52e-11!22;UBERON:0002423!2.52e-11!22;UBERON:0006235!2.52e-11!22;UBERON:0008835!2.52e-11!22;UBERON:0003894!2.52e-11!22;UBERON:0004161!2.52e-11!22;UBERON:0008836!2.52e-11!22;UBERON:0002365!4.76e-11!25;UBERON:0002330!4.76e-11!25;UBERON:0009854!2.12e-10!23;UBERON:0009856!2.12e-10!23;UBERON:0005057!2.28e-08!51;UBERON:0005172!9.15e-08!49;UBERON:0005173!9.15e-08!49;UBERON:0002417!9.15e-08!49;UBERON:0000916!9.15e-08!49;UBERON:0000475!1.31e-07!200 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002365,1.25e-14,25;UBERON:0002330,1.25e-14,25;UBERON:0002107,1.29e-14,22;UBERON:0007499,1.29e-14,22;UBERON:0006925,1.29e-14,22;UBERON:0009497,1.29e-14,22;UBERON:0000015,1.29e-14,22;UBERON:0002423,1.29e-14,22;UBERON:0006235,1.29e-14,22;UBERON:0008835,1.29e-14,22;UBERON:0003894,1.29e-14,22;UBERON:0004161,1.29e-14,22;UBERON:0008836,1.29e-14,22;UBERON:0009854,1.09e-13,23;UBERON:0009856,1.09e-13,23;UBERON:0003929,1.74e-09,55;UBERON:0002368,2.91e-09,60;UBERON:0002530,3.90e-09,65;UBERON:0005172,2.07e-08,49;UBERON:0005173,2.07e-08,49;UBERON:0002417,2.07e-08,49;UBERON:0000916,2.07e-08,49;UBERON:0002021,4.17e-08,10;UBERON:0000411,4.17e-08,10;UBERON:0001950,4.17e-08,10;UBERON:0000073,6.01e-08,54;UBERON:0000025,1.21e-07,114;UBERON:0001049,8.16e-07,52;UBERON:0005068,8.16e-07,52;UBERON:0006241,8.16e-07,52;UBERON:0007135,8.16e-07,52 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,19.9851731855014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436050312760893,0,0,0,0,0,0,0,0,0,0,0.404632921719196,0,0,0,0,0,0,0,0,0,0,0,0,1.42825492201902,1.54607978666129,0,0.191690942036473,0,8.8092704799511,5.87361755191863,7.68032666281217,0.131886287730194,0.0914876436024097,0.52091337055676,3.07101298901519,8.4414391504752,6.72312290217964,2.65165726926301,0.854230084794618,0.372798891650601,0,0,0.579728977403356,96.3674742219153,40.1183086887573,63.1452734216246,134.503718411668,185.0351043712,57.8631010942818,0,0,0,0.422530259330042,0,0,0,0,0,0,89.7485294591811,0,1.1875371125186,0,0,0.230615497256059,0.452167921657868,0.705532242814229,1.88499886994513,0,7.66376591675532,0,0,0,0,0,3.51336956413857,1.8850203613211,0,0,0,0,10.1857634795279,13.2675174817402,0.628271760564322,7.99591872884472,4.09144731728529,7.2725815595846,6.65189178577806,0,0.373220911830279,0,0,0,0,0,0.30140963567143,0,0,0,0.517406741478031,0,0.189106080167819,0.351902248327898,0.219195732427575,0,0,0.205782136407943,0,0,0,0,0,0,0,0,0,0.154267112887378,0,0,0.116765342367169,0,0,0.162137619091711,0,0.219550115291051,0.134206418760372,13.6688466566683,0.514523061896422,0,0,0,0,0.128867461322093,0,0,0.190225626112559,0,0,0.251335208800269,0,0,0,0,0.398282546508734,0,0,0,0,0.969762435838129,2.31448205638051,20.4254014911351,125.321015634682,122.773005171955,173.249618146208,232.418859636325,0,0.196558995113203,0,1.01430060694251,5.788251834058,9.42115651591253,14.6725030099913,61.7735214012885,29.3780712111247,89.1362880469598,84.1038541730818,125.127106918939,251.063404679429,265.687569425952,216.134697570788,0,0,0,0,0,0.167506257441816,0.238043640886014,0,0,0,0.159454768657487,0.327726629431476,0,0,0,0,1.96705709207614,1.37968373152366,7.54587772942622,7.2671245687166,0,1.51482556322624,0.315508219416257,0,0,0,0,0,0,0,0,5.78378369559253,0.425820255624806,0.178065603667255,0,0.329940245945071,0,0.242780636154981,0.302323556964751,0.377210159511796,0.590603785761546,0.614870295887855,0.516856586336442,0.363533729477506,0.712994756769443,0.948110273807448,0,0,0,0,0,0,0,0,0,0,0,0,0,0.98931751764888,0.161464426695906,0,0.238744688006273,0,0.291480836629851,5.00648315428376,0.170870880797853,0,0,0,0.136694227721025,0.457556346413045,0,0,0,2.86401185404534,0,0,0,0,0,0.809186078308924,4.05001933054146,0,0,0,0,0,0.165458490457098,0.388902376688095,0.387479470433193,0.168956125490778,0.234714477291508,0.651021924219751,0,0.241584120826006,0.288030006257865,4.4241556887945,0.202725215290164,0.718976700153791,2.07873316764472,3.04345382634718,1.58945083825012,1.20195449519969,2.21534290761866,1.71642964911851,1.67654974641,2.62148081355785,3.8983152295901,2.11666051608725,3.3894301632655,0,0,0,0,0.772758376128762,0,0,0,0,2.25900737046827,4.14292712856459,2.29158205375759,3.60891682921744,3.42541259885321,2.2661816921691,4.72515750162264,6.30449684513909,5.89085131679466,5.1776031175182,0,0,0,0.729320151204882,0,2.75765262675021,1.33348036680969,1.64828045791115,0.962757628775446,0.758091635291392,1.2673964994512,0.754505365544305,1.03005658216871,0.832326981263301,0.976402972245426,0,1.0429589335037,1.54327376370964,1.23625770240992,1.91358596174717,2.74295401908332,1.06485483695602,1.1921809497366,0.726732083161643,0.752875043322645,1.60767754994185,1.64635175585495,1.05227884575137,1.22223702461276,0,0.949080144993393,0.394017929502254,2.86461730218783,1.08455788830176,1.35034627686799,0.249810577937946,1.87145286756327,6.01638951335235,0.382576664137687,0.220591419119515,0.231867835620421 | |||
|short_description=p2@Papss2 | |||
}} |
Revision as of 17:23, 13 September 2013
Short description: | p2@Papss2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Papss2_5end |
Coexpression cluster: | MCL_coexpression_mm9:8 |
Association with transcript: | 0bp_to_ENSMUST00000025833, NM_011864, uc008hfm.1, uc008hfn.1_5end |
EntrezGene: | Papss2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
exocrine gland | 1.25e-14 | 25 |
exocrine system | 1.25e-14 | 25 |
liver | 1.29e-14 | 22 |
epithelial sac | 1.29e-14 | 22 |
digestive gland | 1.29e-14 | 22 |
epithelium of foregut-midgut junction | 1.29e-14 | 22 |
anatomical boundary | 1.29e-14 | 22 |
hepatobiliary system | 1.29e-14 | 22 |
foregut-midgut junction | 1.29e-14 | 22 |
hepatic diverticulum | 1.29e-14 | 22 |
liver primordium | 1.29e-14 | 22 |
septum transversum | 1.29e-14 | 22 |
liver bud | 1.29e-14 | 22 |
digestive tract diverticulum | 1.09e-13 | 23 |
sac | 1.09e-13 | 23 |
gut epithelium | 1.74e-09 | 55 |
endocrine gland | 2.91e-09 | 60 |
gland | 3.90e-09 | 65 |
abdomen element | 2.07e-08 | 49 |
abdominal segment element | 2.07e-08 | 49 |
abdominal segment of trunk | 2.07e-08 | 49 |
abdomen | 2.07e-08 | 49 |
occipital lobe | 4.17e-08 | 10 |
visual cortex | 4.17e-08 | 10 |
neocortex | 4.17e-08 | 10 |
regional part of nervous system | 6.01e-08 | 54 |
tube | 1.21e-07 | 114 |
neural tube | 8.16e-07 | 52 |
neural rod | 8.16e-07 | 52 |
future spinal cord | 8.16e-07 | 52 |
neural keel | 8.16e-07 | 52 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.