FFCP PHASE1:Mm9::chr19:41403600..41403613,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=2562|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr19:41403600..41403613,+|id=chr19:41403600..41403613,+|ontology_enrichment_celltype=CL:0000988!1.42e-30!32;CL:0002032!1.42e-30!32;CL:0000037!1.42e-30!32;CL:0000566!1.42e-30!32;CL:0000837!1.42e-30!32;CL:0002031!7.86e-21!25;CL:0002320!1.33e-20!46;CL:0000134!1.33e-20!46;CL:0000553!1.19e-19!6;CL:0000556!1.19e-19!6;CL:0000049!5.19e-19!19;CL:0000219!3.24e-17!54;CL:0000034!4.97e-15!97;CL:0000063!1.14e-13!66;CL:0000838!2.53e-13!12;CL:0000050!4.54e-13!9;CL:0000542!2.88e-12!13;CL:0000051!2.88e-12!13;CL:0000144!1.58e-11!121;CL:0000012!1.58e-11!121;CL:0000723!9.36e-11!91;CL:0000048!9.36e-11!91;CL:0000414!1.15e-10!11;CL:0000763!3.46e-10!16;CL:0000084!4.62e-10!11;CL:0000827!4.62e-10!11;CL:0000738!2.78e-09!17;CL:0002087!2.78e-09!17;CL:0000839!5.32e-09!13;CL:0000791!3.24e-08!9;CL:0000789!3.24e-08!9;CL:0002420!3.24e-08!9;CL:0002419!3.24e-08!9;CL:0000790!3.24e-08!9;CL:0002371!1.03e-07!118;CL:0000548!8.00e-07!115;CL:0000004!8.00e-07!115;CL:0000255!8.00e-07!115;CL:0002027!8.37e-07!3;CL:0002006!8.37e-07!3;CL:0002024!8.37e-07!3|ontology_enrichment_celltype_v019_2=CL:0000049,1.87e-16,19;CL:0000553,6.10e-14,6;CL:0000556,6.10e-14,6;CL:0000988,3.18e-13,32;CL:0002032,3.18e-13,32;CL:0000037,3.18e-13,32;CL:0000837,3.18e-13,32;CL:0000945,1.63e-10,1;CL:0000236,1.63e-10,1;CL:0000826,1.63e-10,1;CL:0000050,1.67e-09,9;CL:0002320,4.11e-09,46;CL:0000134,4.11e-09,46;CL:0000034,1.44e-08,97;CL:0000219,1.04e-07,54;CL:0000839,9.51e-07,13|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002384!1.33e-20!46;UBERON:0002371!3.46e-10!16;UBERON:0001474!2.80e-07!22;UBERON:0004765!2.80e-07!22;UBERON:0001434!2.80e-07!22|ontology_enrichment_uberon_v019_2=UBERON:0002384,4.11e-09,46|phase1_expression=0,0,0,0,0,0,0,0.516493293766305,0,0,0,0,0.856003649656029,0.0874204024189974,0.333109761815663,0.202475267389826,0,2.36596624018678,1.64537320326887,2.12194825899015,0,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.7813353445238,0,0,0,0,0,0,0,0,0,0,0,0,0,5.5368259999053,0,0.336093799142464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.7972268675888,1.19980546198682,1.14363204365758,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.702213187313235,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.03974115992626,3.35883485576779,1.10559979043539,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr19:41403600..41403613,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=2562 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr19:41403600..41403613,+ | |||
|id=chr19:41403600..41403613,+ | |||
|ontology_enrichment_celltype=CL:0000988!1.42e-30!32;CL:0002032!1.42e-30!32;CL:0000037!1.42e-30!32;CL:0000566!1.42e-30!32;CL:0000837!1.42e-30!32;CL:0002031!7.86e-21!25;CL:0002320!1.33e-20!46;CL:0000134!1.33e-20!46;CL:0000553!1.19e-19!6;CL:0000556!1.19e-19!6;CL:0000049!5.19e-19!19;CL:0000219!3.24e-17!54;CL:0000034!4.97e-15!97;CL:0000063!1.14e-13!66;CL:0000838!2.53e-13!12;CL:0000050!4.54e-13!9;CL:0000542!2.88e-12!13;CL:0000051!2.88e-12!13;CL:0000144!1.58e-11!121;CL:0000012!1.58e-11!121;CL:0000723!9.36e-11!91;CL:0000048!9.36e-11!91;CL:0000414!1.15e-10!11;CL:0000763!3.46e-10!16;CL:0000084!4.62e-10!11;CL:0000827!4.62e-10!11;CL:0000738!2.78e-09!17;CL:0002087!2.78e-09!17;CL:0000839!5.32e-09!13;CL:0000791!3.24e-08!9;CL:0000789!3.24e-08!9;CL:0002420!3.24e-08!9;CL:0002419!3.24e-08!9;CL:0000790!3.24e-08!9;CL:0002371!1.03e-07!118;CL:0000548!8.00e-07!115;CL:0000004!8.00e-07!115;CL:0000255!8.00e-07!115;CL:0002027!8.37e-07!3;CL:0002006!8.37e-07!3;CL:0002024!8.37e-07!3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000049,1.87e-16,19;CL:0000553,6.10e-14,6;CL:0000556,6.10e-14,6;CL:0000988,3.18e-13,32;CL:0002032,3.18e-13,32;CL:0000037,3.18e-13,32;CL:0000837,3.18e-13,32;CL:0000945,1.63e-10,1;CL:0000236,1.63e-10,1;CL:0000826,1.63e-10,1;CL:0000050,1.67e-09,9;CL:0002320,4.11e-09,46;CL:0000134,4.11e-09,46;CL:0000034,1.44e-08,97;CL:0000219,1.04e-07,54;CL:0000839,9.51e-07,13 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!1.33e-20!46;UBERON:0002371!3.46e-10!16;UBERON:0001474!2.80e-07!22;UBERON:0004765!2.80e-07!22;UBERON:0001434!2.80e-07!22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,4.11e-09,46 | |||
|phase1_expression=0,0,0,0,0,0,0,0.516493293766305,0,0,0,0,0.856003649656029,0.0874204024189974,0.333109761815663,0.202475267389826,0,2.36596624018678,1.64537320326887,2.12194825899015,0,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.7813353445238,0,0,0,0,0,0,0,0,0,0,0,0,0,5.5368259999053,0,0.336093799142464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.7972268675888,1.19980546198682,1.14363204365758,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.702213187313235,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.03974115992626,3.35883485576779,1.10559979043539,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr19:41403600..41403613,+ | |||
}} |
Revision as of 17:37, 13 September 2013
Short description: | p@chr19:41403600..41403613, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr19:41403600..41403613, + |
Coexpression cluster: | MCL_coexpression_mm9:2562 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
common myeloid progenitor | 1.87e-16 | 19 |
megakaryocyte progenitor cell | 6.10e-14 | 6 |
megakaryocyte | 6.10e-14 | 6 |
hematopoietic cell | 3.18e-13 | 32 |
hematopoietic oligopotent progenitor cell | 3.18e-13 | 32 |
hematopoietic stem cell | 3.18e-13 | 32 |
hematopoietic multipotent progenitor cell | 3.18e-13 | 32 |
lymphocyte of B lineage | 1.63e-10 | 1 |
B cell | 1.63e-10 | 1 |
pro-B cell | 1.63e-10 | 1 |
megakaryocyte-erythroid progenitor cell | 1.67e-09 | 9 |
connective tissue cell | 4.11e-09 | 46 |
mesenchymal cell | 4.11e-09 | 46 |
stem cell | 1.44e-08 | 97 |
motile cell | 1.04e-07 | 54 |
myeloid lineage restricted progenitor cell | 9.51e-07 | 13 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 4.11e-09 | 46 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.