FFCP PHASE1:Hg19::chr6:128239704..128239722,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=387357|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=21569|TSSclassifier=S|UniProt=Q8N1K5|association_with_transcript=-19bp_to_,19bp_to_ENST00000368250,uc003qbi.2,uc010kfb.2_5end|coexpression_cluster_id=C98|description=CAGE_peak_4_at_THEMIS_5end|id=chr6:128239704..128239722,-|ontology_enrichment_celltype=CL:0000791!3.38e-31!18;CL:0000789!3.38e-31!18;CL:0002420!3.38e-31!18;CL:0002419!3.38e-31!18;CL:0000790!3.38e-31!18;CL:0000084!1.67e-25!25;CL:0000827!1.67e-25!25;CL:0000625!7.28e-21!11;CL:0000838!1.14e-16!52;CL:0000542!3.35e-16!53;CL:0000051!3.35e-16!53;CL:0000738!4.26e-16!140;CL:0002087!2.78e-15!119;CL:0002031!3.30e-12!124;CL:0000624!4.93e-11!6;CL:0000037!1.28e-10!172;CL:0000566!1.28e-10!172;CL:0000988!2.40e-09!182;CL:0002032!9.50e-09!165;CL:0000837!9.50e-09!165|ontology_enrichment_celltype_v019=CL:0000791;4.82e-45;18!CL:0000789;4.82e-45;18!CL:0002419;4.82e-45;18!CL:0000625;9.38e-41;11!CL:0000084;1.89e-35;25!CL:0000542;2.16e-11;53!CL:0000226;2.27e-11;3!CL:0000842;2.27e-11;3!CL:0000623;7.77e-11;3!CL:0000624;1.82e-10;6|ontology_enrichment_celltype_v019_2=CL:0000791,4.75e-45,18;CL:0000789,4.75e-45,18;CL:0002420,4.75e-45,18;CL:0002419,4.75e-45,18;CL:0000790,4.75e-45,18;CL:0000625,8.57e-41,11;CL:0000084,2.12e-35,25;CL:0000827,2.12e-35,25;CL:0000838,2.86e-21,52;CL:0000542,8.93e-21,53;CL:0000051,8.93e-21,53;CL:0000226,1.90e-11,3;CL:0000842,1.90e-11,3;CL:0002087,4.15e-11,115;CL:0000623,7.51e-11,3;CL:0000825,7.51e-11,3;CL:0000738,1.67e-10,136;CL:0000624,1.91e-10,6;CL:0000037,2.03e-07,168;CL:0002031,2.13e-07,120;CL:0000988,9.21e-07,177|ontology_enrichment_development_v019=CL:0000790;4.82e-45;18!CL:0000051;2.16e-11;53|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!4.16e-22!115;UBERON:0000178!4.09e-16!15;UBERON:0000179!4.09e-16!15;UBERON:0000463!4.09e-16!15;UBERON:0002390!2.34e-09!102;UBERON:0003061!2.34e-09!102;UBERON:0002193!2.65e-09!112;UBERON:0004177!1.92e-08!7;UBERON:0003408!1.41e-07!10;UBERON:0002370!3.58e-07!4;UBERON:0005058!3.58e-07!4;UBERON:0009113!3.58e-07!4;UBERON:0003295!3.58e-07!4;UBERON:0005562!3.58e-07!4|ontology_enrichment_uberon_v019=UBERON:0000178;2.62e-32;15!UBERON:0000179;2.62e-32;15!UBERON:0000463;2.62e-32;15!UBERON:0002390;1.16e-17;32!UBERON:0002193;2.66e-13;42!UBERON:0001829;1.16e-07;2|ontology_enrichment_uberon_v019_2=UBERON:0000178,2.21e-32,15;UBERON:0000179,2.21e-32,15;UBERON:0000463,2.21e-32,15;UBERON:0001829,1.16e-07,2|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.30297638858328,0.154816123316076,0,0,0,0,0,0,0,0.601633342410425,0.868043482863407,0.223915474239924,3.2389366601898,0,0,0.377875943688809,0,0,0,0.309706370895104,0,0,0.236482229888585,0,0,0,0.188242339542605,0,0,0.306083892370903,0,0,0,0,0,0,0,0,0.251248665256743,0.521482918420201,0,0.605399502633369,0.368277635987565,0,0,0,0,0,0,0,0,0.19891667719909,0,0,0.546138611262131,0,0.426730222566507,0,0,0,0,0,0,0.382273228125229,0,0,0,9.24535919535015,5.10913991573914,11.308082444973,0.334372990781356,0.32592226663359,0,0,0.779873198196215,0.883817722424512,2.43687284041983,1.08321545506006,0.384273959177026,0.130059347559878,1.97325485524411,1.10540007114339,2.60822777161547,5.33831627383417,4.54819407752512,8.36284190439814,4.64568305060021,15.3288197440768,18.8995095015446,23.2778116657943,12.1054857443157,11.7195021694155,12.3558765778289,20.6287913136549,22.01369711856,12.4930726552346,15.8640758869491,14.7803039445788,8.46748321543876,6.15112450302067,8.68946423296794,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.20731549707325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112085143993527,2.1673383622212,3.45004119775228,1.79680250791648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.78950473144085,2.80428461064202,4.69601254335155,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282431402330337,0,0,0,0,4.05958087385735,7.64637207142375,3.98753031021914,4.76463550915578,6.17043409629291,10.3755729790835,8.10047155857172,4.75875105776562,0,0,0,0,0,0.142283686696828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0.19924798825107,4.14425873296722,0,0,0,0,0,0,0,0.0986434056369336,2.3948309234694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0.219385397153973,0,0,0.307801034015188,0,0,0,0,0,0,0,1.02193298195737,0,0,0,0,0,0,0,0,0,0,0,0,0.707660516026713,0,0,0,0,0,0,0,0,0,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=387357 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21569 | |||
|TSSclassifier=S | |||
|UniProt=Q8N1K5 | |||
|association_with_transcript=-19bp_to_,19bp_to_ENST00000368250,uc003qbi.2,uc010kfb.2_5end | |||
|coexpression_cluster_id=C98 | |||
|description=CAGE_peak_4_at_THEMIS_5end | |||
|id=chr6:128239704..128239722,- | |||
|ontology_enrichment_celltype=CL:0000791!3.38e-31!18;CL:0000789!3.38e-31!18;CL:0002420!3.38e-31!18;CL:0002419!3.38e-31!18;CL:0000790!3.38e-31!18;CL:0000084!1.67e-25!25;CL:0000827!1.67e-25!25;CL:0000625!7.28e-21!11;CL:0000838!1.14e-16!52;CL:0000542!3.35e-16!53;CL:0000051!3.35e-16!53;CL:0000738!4.26e-16!140;CL:0002087!2.78e-15!119;CL:0002031!3.30e-12!124;CL:0000624!4.93e-11!6;CL:0000037!1.28e-10!172;CL:0000566!1.28e-10!172;CL:0000988!2.40e-09!182;CL:0002032!9.50e-09!165;CL:0000837!9.50e-09!165 | |||
|ontology_enrichment_celltype_v019=CL:0000791;4.82e-45;18!CL:0000789;4.82e-45;18!CL:0002419;4.82e-45;18!CL:0000625;9.38e-41;11!CL:0000084;1.89e-35;25!CL:0000542;2.16e-11;53!CL:0000226;2.27e-11;3!CL:0000842;2.27e-11;3!CL:0000623;7.77e-11;3!CL:0000624;1.82e-10;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,4.75e-45,18;CL:0000789,4.75e-45,18;CL:0002420,4.75e-45,18;CL:0002419,4.75e-45,18;CL:0000790,4.75e-45,18;CL:0000625,8.57e-41,11;CL:0000084,2.12e-35,25;CL:0000827,2.12e-35,25;CL:0000838,2.86e-21,52;CL:0000542,8.93e-21,53;CL:0000051,8.93e-21,53;CL:0000226,1.90e-11,3;CL:0000842,1.90e-11,3;CL:0002087,4.15e-11,115;CL:0000623,7.51e-11,3;CL:0000825,7.51e-11,3;CL:0000738,1.67e-10,136;CL:0000624,1.91e-10,6;CL:0000037,2.03e-07,168;CL:0002031,2.13e-07,120;CL:0000988,9.21e-07,177 | |||
|ontology_enrichment_development_v019=CL:0000790;4.82e-45;18!CL:0000051;2.16e-11;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.16e-22!115;UBERON:0000178!4.09e-16!15;UBERON:0000179!4.09e-16!15;UBERON:0000463!4.09e-16!15;UBERON:0002390!2.34e-09!102;UBERON:0003061!2.34e-09!102;UBERON:0002193!2.65e-09!112;UBERON:0004177!1.92e-08!7;UBERON:0003408!1.41e-07!10;UBERON:0002370!3.58e-07!4;UBERON:0005058!3.58e-07!4;UBERON:0009113!3.58e-07!4;UBERON:0003295!3.58e-07!4;UBERON:0005562!3.58e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.62e-32;15!UBERON:0000179;2.62e-32;15!UBERON:0000463;2.62e-32;15!UBERON:0002390;1.16e-17;32!UBERON:0002193;2.66e-13;42!UBERON:0001829;1.16e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,2.21e-32,15;UBERON:0000179,2.21e-32,15;UBERON:0000463,2.21e-32,15;UBERON:0001829,1.16e-07,2 | |||
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|short_description=p4@THEMIS | |||
}} |
Revision as of 17:52, 13 September 2013
Short description: | p4@THEMIS |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_THEMIS_5end |
Coexpression cluster: | C98_CD8_Natural_Basophils_blood_CD4_Peripheral_Whole |
Association with transcript: | -19bp_to_, 19bp_to_ENST00000368250, uc003qbi.2, uc010kfb.2_5end |
EntrezGene: | THEMIS |
HGNC: | 21569 |
UniProt: | Q8N1K5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 4.75e-45 | 18 |
alpha-beta T cell | 4.75e-45 | 18 |
immature T cell | 4.75e-45 | 18 |
mature T cell | 4.75e-45 | 18 |
immature alpha-beta T cell | 4.75e-45 | 18 |
CD8-positive, alpha-beta T cell | 8.57e-41 | 11 |
T cell | 2.12e-35 | 25 |
pro-T cell | 2.12e-35 | 25 |
lymphoid lineage restricted progenitor cell | 2.86e-21 | 52 |
lymphocyte | 8.93e-21 | 53 |
common lymphoid progenitor | 8.93e-21 | 53 |
single nucleate cell | 1.90e-11 | 3 |
mononuclear cell | 1.90e-11 | 3 |
nongranular leukocyte | 4.15e-11 | 115 |
natural killer cell | 7.51e-11 | 3 |
pro-NK cell | 7.51e-11 | 3 |
leukocyte | 1.67e-10 | 136 |
CD4-positive, alpha-beta T cell | 1.91e-10 | 6 |
hematopoietic stem cell | 2.03e-07 | 168 |
hematopoietic lineage restricted progenitor cell | 2.13e-07 | 120 |
hematopoietic cell | 9.21e-07 | 177 |
Ontology term | p-value | n |
---|---|---|
blood | 2.21e-32 | 15 |
haemolymphatic fluid | 2.21e-32 | 15 |
organism substance | 2.21e-32 | 15 |
major salivary gland | 1.16e-07 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.