FFCP PHASE1:Hg19::chr6:13925318..13925342,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=221687|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=28522|TSSclassifier=S|UniProt=C9IZ30,Q8N6D2|association_with_transcript=-81bp_to_ENST00000423553,ENST00000537388,NM_001165033_5end|coexpression_cluster_id=C117|description=CAGE_peak_2_at_RNF182_5end|id=chr6:13925318..13925342,+|ontology_enrichment_celltype=CL:0000128!4.25e-07!7;CL:0000126!4.25e-07!7;CL:0000127!4.25e-07!7;CL:0002453!4.25e-07!7|ontology_enrichment_celltype_v019=CL:0000313;9.88e-08;1!CL:0000222;3.61e-07;1|ontology_enrichment_celltype_v019_2=CL:0000313,9.91e-08,1|ontology_enrichment_development_v019=UBERON:0008947;4.33e-09;29!UBERON:0006215;9.75e-09;3|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:2152;9.88e-08;1|ontology_enrichment_disease_v019_2=DOID:305,1.44e-09,106;DOID:2152,9.91e-08,1|ontology_enrichment_uberon=UBERON:0001049!1.63e-35!57;UBERON:0005068!1.63e-35!57;UBERON:0006241!1.63e-35!57;UBERON:0007135!1.63e-35!57;UBERON:0001017!6.21e-30!82;UBERON:0002616!3.79e-28!59;UBERON:0005743!7.18e-28!86;UBERON:0002346!1.20e-27!90;UBERON:0003075!1.33e-26!86;UBERON:0007284!1.33e-26!86;UBERON:0000955!4.54e-26!69;UBERON:0006238!4.54e-26!69;UBERON:0000073!5.05e-25!94;UBERON:0001016!5.05e-25!94;UBERON:0001893!5.87e-22!34;UBERON:0002020!1.61e-21!34;UBERON:0003528!1.61e-21!34;UBERON:0002791!1.29e-20!33;UBERON:0002780!1.69e-20!41;UBERON:0001890!1.69e-20!41;UBERON:0006240!1.69e-20!41;UBERON:0003080!8.07e-20!42;UBERON:0000956!1.46e-19!25;UBERON:0000203!1.46e-19!25;UBERON:0001869!1.64e-19!32;UBERON:0003076!1.85e-18!15;UBERON:0003057!1.85e-18!15;UBERON:0003056!9.37e-17!61;UBERON:0002619!3.01e-16!22;UBERON:0001950!6.13e-16!20;UBERON:0001737!5.77e-15!9;UBERON:0004733!1.48e-14!12;UBERON:0002028!1.48e-14!12;UBERON:0007277!1.48e-14!12;UBERON:0000153!2.39e-14!129;UBERON:0007811!2.39e-14!129;UBERON:0000033!4.27e-14!123;UBERON:0007023!5.53e-14!115;UBERON:0000924!2.76e-13!173;UBERON:0006601!2.76e-13!173;UBERON:0004732!3.33e-13!13;UBERON:0004121!1.91e-12!169;UBERON:0000064!3.89e-11!219;UBERON:0002680!6.83e-11!9;UBERON:0001895!6.83e-11!9;UBERON:0010092!6.83e-11!9;UBERON:0002298!4.75e-09!8;UBERON:0000477!5.57e-09!286;UBERON:0001557!2.04e-08!19;UBERON:0002021!5.42e-08!5;UBERON:0000063!2.23e-07!97;UBERON:0002037!4.82e-07!6;UBERON:0006215!4.82e-07!6|ontology_enrichment_uberon_v019=UBERON:0001737;3.78e-31;9!UBERON:0001557;3.78e-31;9!UBERON:0001893;1.69e-09;34!UBERON:0001950;1.72e-09;20!UBERON:0002619;1.29e-08;22!UBERON:0004911;9.88e-08;1!UBERON:0000956;1.47e-07;25!UBERON:0000203;1.47e-07;25!UBERON:0002581;3.61e-07;1!UBERON:0002902;3.61e-07;1!UBERON:0002336;3.61e-07;1!UBERON:0011215;3.61e-07;1!UBERON:0001018;3.61e-07;1!UBERON:0002473;3.61e-07;1!UBERON:0005340;3.61e-07;1!UBERON:0003544;3.61e-07;1!UBERON:0005970;3.61e-07;1!UBERON:0009899;3.61e-07;1!UBERON:0002316;3.61e-07;1!UBERON:0001020;3.61e-07;1!UBERON:0007190;3.61e-07;1!UBERON:0002437;3.61e-07;1!UBERON:0001869;5.88e-07;32|ontology_enrichment_uberon_v019_2=UBERON:0001737,4.20e-31,9;UBERON:0001557,2.63e-14,19;UBERON:0000073,5.39e-11,53;UBERON:0002616,5.39e-11,53;UBERON:0001049,2.60e-10,56;UBERON:0005068,2.60e-10,56;UBERON:0006241,2.60e-10,56;UBERON:0007135,2.60e-10,56;UBERON:0000955,1.27e-09,68;UBERON:0006238,1.27e-09,68;UBERON:0001950,1.53e-09,20;UBERON:0001893,1.72e-09,34;UBERON:0001017,2.94e-09,81;UBERON:0002619,1.15e-08,22;UBERON:0001016,4.12e-08,89;UBERON:0001869,7.22e-08,32;UBERON:0004911,9.91e-08,1;UBERON:0002780,1.02e-07,41;UBERON:0001890,1.02e-07,41;UBERON:0003080,1.02e-07,41;UBERON:0006240,1.02e-07,41;UBERON:0000956,1.33e-07,25;UBERON:0000203,1.33e-07,25;UBERON:0002581,1.85e-07,1;UBERON:0007190,3.02e-07,1;UBERON:0002902,4.60e-07,1;UBERON:0009899,4.60e-07,1;UBERON:0011216,6.02e-07,223;UBERON:0002336,7.40e-07,1;UBERON:0011215,7.40e-07,1;UBERON:0001018,7.40e-07,1;UBERON:0002473,7.40e-07,1;UBERON:0005340,7.40e-07,1;UBERON:0003544,7.40e-07,1;UBERON:0005970,7.40e-07,1;UBERON:0002316,7.40e-07,1;UBERON:0001020,7.40e-07,1;UBERON:0002437,7.40e-07,1|phase1_expression=0,0,0,0,0.446961094427288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369363174230364,0,0.626909442956176,0.572471974262113,0.136874425072884,0.502170558379211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189069634328136,0.221729397462564,0.087834785693126,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35576626268671,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.312160076830321,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974370051611986,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,1.53798840051797,1.85443159085912,0.723033089650446,1.65440959098591,1.08939722046203,2.13543557199987,1.21348177344148,1.17732879075208,0.38474715694639,0,0,0,0,0,0,0,0,0,0.343135620597051,0,0,0,0,0,0,0,0.463721619900307,0,0,0.462985512576611,0,0,0,0,0,0,0,0,0,0,0,0,0,0.088048434013226,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=221687 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28522 | |||
|TSSclassifier=S | |||
|UniProt=C9IZ30,Q8N6D2 | |||
|association_with_transcript=-81bp_to_ENST00000423553,ENST00000537388,NM_001165033_5end | |||
|coexpression_cluster_id=C117 | |||
|description=CAGE_peak_2_at_RNF182_5end | |||
|id=chr6:13925318..13925342,+ | |||
|ontology_enrichment_celltype=CL:0000128!4.25e-07!7;CL:0000126!4.25e-07!7;CL:0000127!4.25e-07!7;CL:0002453!4.25e-07!7 | |||
|ontology_enrichment_celltype_v019=CL:0000313;9.88e-08;1!CL:0000222;3.61e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000313,9.91e-08,1 | |||
|ontology_enrichment_development_v019=UBERON:0008947;4.33e-09;29!UBERON:0006215;9.75e-09;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:2152;9.88e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:305,1.44e-09,106;DOID:2152,9.91e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0001049!1.63e-35!57;UBERON:0005068!1.63e-35!57;UBERON:0006241!1.63e-35!57;UBERON:0007135!1.63e-35!57;UBERON:0001017!6.21e-30!82;UBERON:0002616!3.79e-28!59;UBERON:0005743!7.18e-28!86;UBERON:0002346!1.20e-27!90;UBERON:0003075!1.33e-26!86;UBERON:0007284!1.33e-26!86;UBERON:0000955!4.54e-26!69;UBERON:0006238!4.54e-26!69;UBERON:0000073!5.05e-25!94;UBERON:0001016!5.05e-25!94;UBERON:0001893!5.87e-22!34;UBERON:0002020!1.61e-21!34;UBERON:0003528!1.61e-21!34;UBERON:0002791!1.29e-20!33;UBERON:0002780!1.69e-20!41;UBERON:0001890!1.69e-20!41;UBERON:0006240!1.69e-20!41;UBERON:0003080!8.07e-20!42;UBERON:0000956!1.46e-19!25;UBERON:0000203!1.46e-19!25;UBERON:0001869!1.64e-19!32;UBERON:0003076!1.85e-18!15;UBERON:0003057!1.85e-18!15;UBERON:0003056!9.37e-17!61;UBERON:0002619!3.01e-16!22;UBERON:0001950!6.13e-16!20;UBERON:0001737!5.77e-15!9;UBERON:0004733!1.48e-14!12;UBERON:0002028!1.48e-14!12;UBERON:0007277!1.48e-14!12;UBERON:0000153!2.39e-14!129;UBERON:0007811!2.39e-14!129;UBERON:0000033!4.27e-14!123;UBERON:0007023!5.53e-14!115;UBERON:0000924!2.76e-13!173;UBERON:0006601!2.76e-13!173;UBERON:0004732!3.33e-13!13;UBERON:0004121!1.91e-12!169;UBERON:0000064!3.89e-11!219;UBERON:0002680!6.83e-11!9;UBERON:0001895!6.83e-11!9;UBERON:0010092!6.83e-11!9;UBERON:0002298!4.75e-09!8;UBERON:0000477!5.57e-09!286;UBERON:0001557!2.04e-08!19;UBERON:0002021!5.42e-08!5;UBERON:0000063!2.23e-07!97;UBERON:0002037!4.82e-07!6;UBERON:0006215!4.82e-07!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;3.78e-31;9!UBERON:0001557;3.78e-31;9!UBERON:0001893;1.69e-09;34!UBERON:0001950;1.72e-09;20!UBERON:0002619;1.29e-08;22!UBERON:0004911;9.88e-08;1!UBERON:0000956;1.47e-07;25!UBERON:0000203;1.47e-07;25!UBERON:0002581;3.61e-07;1!UBERON:0002902;3.61e-07;1!UBERON:0002336;3.61e-07;1!UBERON:0011215;3.61e-07;1!UBERON:0001018;3.61e-07;1!UBERON:0002473;3.61e-07;1!UBERON:0005340;3.61e-07;1!UBERON:0003544;3.61e-07;1!UBERON:0005970;3.61e-07;1!UBERON:0009899;3.61e-07;1!UBERON:0002316;3.61e-07;1!UBERON:0001020;3.61e-07;1!UBERON:0007190;3.61e-07;1!UBERON:0002437;3.61e-07;1!UBERON:0001869;5.88e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,4.20e-31,9;UBERON:0001557,2.63e-14,19;UBERON:0000073,5.39e-11,53;UBERON:0002616,5.39e-11,53;UBERON:0001049,2.60e-10,56;UBERON:0005068,2.60e-10,56;UBERON:0006241,2.60e-10,56;UBERON:0007135,2.60e-10,56;UBERON:0000955,1.27e-09,68;UBERON:0006238,1.27e-09,68;UBERON:0001950,1.53e-09,20;UBERON:0001893,1.72e-09,34;UBERON:0001017,2.94e-09,81;UBERON:0002619,1.15e-08,22;UBERON:0001016,4.12e-08,89;UBERON:0001869,7.22e-08,32;UBERON:0004911,9.91e-08,1;UBERON:0002780,1.02e-07,41;UBERON:0001890,1.02e-07,41;UBERON:0003080,1.02e-07,41;UBERON:0006240,1.02e-07,41;UBERON:0000956,1.33e-07,25;UBERON:0000203,1.33e-07,25;UBERON:0002581,1.85e-07,1;UBERON:0007190,3.02e-07,1;UBERON:0002902,4.60e-07,1;UBERON:0009899,4.60e-07,1;UBERON:0011216,6.02e-07,223;UBERON:0002336,7.40e-07,1;UBERON:0011215,7.40e-07,1;UBERON:0001018,7.40e-07,1;UBERON:0002473,7.40e-07,1;UBERON:0005340,7.40e-07,1;UBERON:0003544,7.40e-07,1;UBERON:0005970,7.40e-07,1;UBERON:0002316,7.40e-07,1;UBERON:0001020,7.40e-07,1;UBERON:0002437,7.40e-07,1 | |||
|phase1_expression=0,0,0,0,0.446961094427288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369363174230364,0,0.626909442956176,0.572471974262113,0.136874425072884,0.502170558379211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189069634328136,0.221729397462564,0.087834785693126,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35576626268671,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.312160076830321,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974370051611986,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,1.53798840051797,1.85443159085912,0.723033089650446,1.65440959098591,1.08939722046203,2.13543557199987,1.21348177344148,1.17732879075208,0.38474715694639,0,0,0,0,0,0,0,0,0,0.343135620597051,0,0,0,0,0,0,0,0.463721619900307,0,0,0.462985512576611,0,0,0,0,0,0,0,0,0,0,0,0,0,0.088048434013226,0,0,0,0.063497894292169,0.763976851116555,0,0,0,0,0,0.112131084345361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.239624855491583,0,0,0,0,0,0,0,0,0,0.76228387266739,0,1.54657762555539,0,0,0,0,0,0,0,0.271265023699736,0,0,0,0,0,0,0,0,0.184369168541703,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177561725313127,0.164254312027618,0,0.348631135379878,0,0,0,0,0,0,0,0.15403067420883,0,0,0,0,0,0,0,0,0,0,1.66215201785745,0,0,0,0,0,0,0,0,0,0,0,0,0.096670718292122,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.421258456238981,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.476463550915578,0.822724546172388,0,0,0,0.427296284509893,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.4098700508785,0,0,0,0,0,0,0,0,0,0.281338832821026,0,0,0,0,0,0,0.102268682502155,0,0,0,0,0,0,0,0,0,1.20598527610407,0,0,0,0,0,0,0,0.344743373241465,2.33283690706603,0,0,0,1.52581736317083,1.10579259931225,0.886642856860642,0,19.2821080428613,0,0,0,0,0,0,0,0,0,0,0,0,0.451191321234361,0.588187602953219,0.335643173951685,0.37950746544837,3.49660473756833,0,0,0,0,0,0,0,0,0,0,1.01101699471016,0,0.702793337176017,0,0,6.5550702474205,0,0,0,0.126373159256976,0.300646838828985,0,0,0,0,0,0,0,0,0,0,0,0,2.41890828222713,4.60462697642969,1.47807822695777,0,0,0.225980740780532,0,0,1.39283751102933,0,0,0,0,0,0,0,0,0,25.4549557386139,0,0.104602846312333,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.817220436669454,0,0.137539436597234,0,0,0,0.850493793212345,0,0,0.157363764404994,0,0,0.191915197319445,0,0,0,0,0,0,0,0.328370082997356,0,0,0,0,0.517131825446202,0.26446520348538,0,0,0.106787412567695,0,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0.250381861413,0.573409195690071,0.221858103073705,0.745156835296601,0,0,0,0.285465333544967,0,1.40500471742064,0,0.149254802886874,0,0,0.189403005275089,0,0,0.228840068396924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26184898228651,0,0,0,0,0,0,0,0.308801447160972,0,0,0,0,0,0,0,0.691292180758654,0,0,0,0,0,0,0,0,0,0.567515953566836,0,0,0,0,0,0,0,0,0.850299680406731,0,0,0,0.0788617450012534,0,0,0.3062454773532,0.834979926253974,1.41696576325585,0.319267718114302,0.41023272848151,0.252071696221718,1.24483054435592,0.484426936895553,0,0,0,0,0,0,0.690359926060101,0,0,0,0,0,0,0,1.48582686160468,0.781078098613847,0.413373593002368,1.58539525484767,0,0,0,0.351742488719241,0,0,0,0,0,0,0,0,1.63127359144396,1.71009211263408,0,1.22354542081276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118332000730565,0,0.423387050190929,0,0,0,29.4179785628194,0,0,0,0,0,0,0.467878926924211,0.198950775161368,0.118920090777569,0.11294608203896,0,0.150962843566674,0,0,0,0,0,0.392616934229891,0.594092800654172,0.8453114551668,0.169927114687817,0,0,0,0,0,0,0,0,0.573358332605805,0.157771562193185,1.22384682343646,0.436350690340377,0,0.371995018166751,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0.829169439458779,0,0,0,0.258355639344024,0.0620747142958579,0,0,0,0,0,0,0,0,0,0.213454691755431,0,0,0,0,0,0,0,0 | |||
|short_description=p2@RNF182 | |||
}} |
Revision as of 18:22, 13 September 2013
Short description: | p2@RNF182 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_RNF182_5end |
Coexpression cluster: | C117_serous_clear_kidney_neuroectodermal_mesothelioma_endometrial_Intestinal |
Association with transcript: | -81bp_to_ENST00000423553, ENST00000537388, NM_001165033_5end |
EntrezGene: | RNF182 |
HGNC: | 28522 |
UniProt: | C9IZ30Q8N6D2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
serous secreting cell | 9.91e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 1.44e-09 | 106 |
ovary epithelial cancer | 9.91e-08 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.