FFCP PHASE1:Mm9::chr1:138130615..138130628,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=107|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr1:138130615..138130628,-|id=chr1:138130615..138130628,-|ontology_enrichment_celltype=CL:0000107!1.49e-09!9;CL:0002319!5.73e-07!43|ontology_enrichment_celltype_v019_2=CL:0000107,3.06e-41,9;CL:0002319,2.05e-11,43;CL:0000221,4.08e-11,44;CL:0000133,4.08e-11,44;CL:0000540,2.57e-10,33;CL:0000047,2.57e-10,33;CL:0000031,2.57e-10,33;CL:0000404,2.57e-10,33;CL:0000878,7.78e-10,2;CL:0000129,7.78e-10,2;CL:0002321,6.07e-09,70;CL:0000393,1.60e-08,39;CL:0000211,1.60e-08,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002410!1.49e-09!9;UBERON:0000010!5.04e-08!11|ontology_enrichment_uberon_v019_2=UBERON:0002410,3.06e-41,9;UBERON:0000010,1.58e-33,11;UBERON:0000011,3.66e-15,3;UBERON:0000013,7.68e-15,3;UBERON:0010313,2.18e-14,3;UBERON:0002342,2.18e-14,3;UBERON:0002005,2.18e-14,3;UBERON:0005428,2.18e-14,3;UBERON:0005062,2.18e-14,3|phase1_expression=0,0,0,0,0,1.00727563147134,0.467225281191051,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0.992909512008853,0.522399578277871,0.159992422793407,0.22940928106717,0,0.430761996159075,0,0.950117097281869,0.252030129759931,0.221730510655305,0,0,0,0.577703239502549,0.332469290716985,0.408338712524738,0,0,0,0,0,0,0,0,0.183546752161682,0,0.218025156380447,0.219686182734472,0,0.139986421625363,0,0,0,0,0,0,0,0.202316460859598,0,0,0.677689064138264,0,0,0,0,1.49800055259202,3.07374644257244,0.725827286159344,0.675029691658453,0.210324961351382,0.571301968807607,0.662605622854841,0.244981598429908,0.0958454710182364,0,0,0.127687338085188,0,0.263772575460388,0,0,0.279182999001381,0,0.30559649555362,0,0.569486723196412,0,0,0.0755715601067855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.760079596425296,1.01104889002957,0.11418387971906,0,0,0,0,0,0,0,0,0.247194967734374,0,0,0,0.220841518460394,0,0,0,0.209446706813455,0.510914110417183,0,0,0,0,0,0.251308704225729,0,0,0.41557608911912,0.324482526135515,0.101839363850316,0.124406970610093,0,0,0.780722657776222,0,0.180062129805349,0.30140963567143,0,0,0.0937017245597288,0,1.94011193639558,0.567318240503458,1.05570674498369,0.657587197282725,0,0,0,0.398068533636986,0,0,0,0.207125772535502,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102904612379284,0,0,1.49301775374664,0.232236671860439,0.38660238396628,0.201683524623343,0.444756087689741,0.190225626112559,0,0,0,0.198956472041151,0,0,0.432276099749388,1.1948476395262,1.13800740571849,0.571242563048644,0,0,0,0.420814919341911,0.126473074248515,0.147610147979602,0.156998727841375,0,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.651859905768103,0.169745085775188,0.234690248288502,0.502518772325447,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.10160685241134,3.90438744296638,3.87762115919038,5.9742199488138,8.46634961513098,11.0399847007645,6.8817819284732,4.67609372658099,4.74345333535828,0,0,0,0.162886959353576,0.164970122972535,0,0.242780636154981,0,0.188605079755898,0,0,0,0,0,0,0,0,0,0.18006109403131,0.258717367565509,0.857348140126369,0.177340233642274,0,0.164549020602121,0,0,0.42366414172764,0,0,0,0.0603129249281559,0,0.164140899745061,0,0,0,0.206386867963223,0,0,0,0,0,0,0,0.954670618015114,1.89801596148681,0.406638934253697,0.648032044930808,0,0,0.269728692769641,0.495920734352016,0.26175594198403,1.29614973291793,0,0,0.299033092087958,0.165458490457098,0,0,0,0,0.13020438484395,0,0,0.288030006257865,0,0.608175645870493,0.718976700153791,0.25984164595559,0.716106782669926,0.596044064343795,0.120195449519969,0.147689527174577,0.201932899896295,0.15241361331,0,0.0974578807397524,0.0962118416403295,0.350630706544707,0,0,0,0,0,0,0.549454872801795,0,0.501572104035363,0,0,0.572895513439397,0,0.685082519770642,0.755393897389701,0,0,0.453142408984205,0,0.31136204275253,0,0.170733605754134,0,0.209613162627982,0,0,0,0,0.252697211763798,0,0.377252682772152,0,0.0640251524048693,0,0,0.115884325944855,0.192909220463705,0,0,0.342869252385415,0,0,0,0,0.0846146078916765,0.182927972872773,0,0,0,0,0.0985044823755635,0,0.309873682371932,0,0,0,0,0,0,0|short_description=p@chr1:138130615..138130628,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=107 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr1:138130615..138130628,- | |||
|id=chr1:138130615..138130628,- | |||
|ontology_enrichment_celltype=CL:0000107!1.49e-09!9;CL:0002319!5.73e-07!43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000107,3.06e-41,9;CL:0002319,2.05e-11,43;CL:0000221,4.08e-11,44;CL:0000133,4.08e-11,44;CL:0000540,2.57e-10,33;CL:0000047,2.57e-10,33;CL:0000031,2.57e-10,33;CL:0000404,2.57e-10,33;CL:0000878,7.78e-10,2;CL:0000129,7.78e-10,2;CL:0002321,6.07e-09,70;CL:0000393,1.60e-08,39;CL:0000211,1.60e-08,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002410!1.49e-09!9;UBERON:0000010!5.04e-08!11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002410,3.06e-41,9;UBERON:0000010,1.58e-33,11;UBERON:0000011,3.66e-15,3;UBERON:0000013,7.68e-15,3;UBERON:0010313,2.18e-14,3;UBERON:0002342,2.18e-14,3;UBERON:0002005,2.18e-14,3;UBERON:0005428,2.18e-14,3;UBERON:0005062,2.18e-14,3 | |||
|phase1_expression=0,0,0,0,0,1.00727563147134,0.467225281191051,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0.992909512008853,0.522399578277871,0.159992422793407,0.22940928106717,0,0.430761996159075,0,0.950117097281869,0.252030129759931,0.221730510655305,0,0,0,0.577703239502549,0.332469290716985,0.408338712524738,0,0,0,0,0,0,0,0,0.183546752161682,0,0.218025156380447,0.219686182734472,0,0.139986421625363,0,0,0,0,0,0,0,0.202316460859598,0,0,0.677689064138264,0,0,0,0,1.49800055259202,3.07374644257244,0.725827286159344,0.675029691658453,0.210324961351382,0.571301968807607,0.662605622854841,0.244981598429908,0.0958454710182364,0,0,0.127687338085188,0,0.263772575460388,0,0,0.279182999001381,0,0.30559649555362,0,0.569486723196412,0,0,0.0755715601067855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.760079596425296,1.01104889002957,0.11418387971906,0,0,0,0,0,0,0,0,0.247194967734374,0,0,0,0.220841518460394,0,0,0,0.209446706813455,0.510914110417183,0,0,0,0,0,0.251308704225729,0,0,0.41557608911912,0.324482526135515,0.101839363850316,0.124406970610093,0,0,0.780722657776222,0,0.180062129805349,0.30140963567143,0,0,0.0937017245597288,0,1.94011193639558,0.567318240503458,1.05570674498369,0.657587197282725,0,0,0,0.398068533636986,0,0,0,0.207125772535502,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102904612379284,0,0,1.49301775374664,0.232236671860439,0.38660238396628,0.201683524623343,0.444756087689741,0.190225626112559,0,0,0,0.198956472041151,0,0,0.432276099749388,1.1948476395262,1.13800740571849,0.571242563048644,0,0,0,0.420814919341911,0.126473074248515,0.147610147979602,0.156998727841375,0,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.651859905768103,0.169745085775188,0.234690248288502,0.502518772325447,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.10160685241134,3.90438744296638,3.87762115919038,5.9742199488138,8.46634961513098,11.0399847007645,6.8817819284732,4.67609372658099,4.74345333535828,0,0,0,0.162886959353576,0.164970122972535,0,0.242780636154981,0,0.188605079755898,0,0,0,0,0,0,0,0,0,0.18006109403131,0.258717367565509,0.857348140126369,0.177340233642274,0,0.164549020602121,0,0,0.42366414172764,0,0,0,0.0603129249281559,0,0.164140899745061,0,0,0,0.206386867963223,0,0,0,0,0,0,0,0.954670618015114,1.89801596148681,0.406638934253697,0.648032044930808,0,0,0.269728692769641,0.495920734352016,0.26175594198403,1.29614973291793,0,0,0.299033092087958,0.165458490457098,0,0,0,0,0.13020438484395,0,0,0.288030006257865,0,0.608175645870493,0.718976700153791,0.25984164595559,0.716106782669926,0.596044064343795,0.120195449519969,0.147689527174577,0.201932899896295,0.15241361331,0,0.0974578807397524,0.0962118416403295,0.350630706544707,0,0,0,0,0,0,0.549454872801795,0,0.501572104035363,0,0,0.572895513439397,0,0.685082519770642,0.755393897389701,0,0,0.453142408984205,0,0.31136204275253,0,0.170733605754134,0,0.209613162627982,0,0,0,0,0.252697211763798,0,0.377252682772152,0,0.0640251524048693,0,0,0.115884325944855,0.192909220463705,0,0,0.342869252385415,0,0,0,0,0.0846146078916765,0.182927972872773,0,0,0,0,0.0985044823755635,0,0.309873682371932,0,0,0,0,0,0,0 | |||
|short_description=p@chr1:138130615..138130628,- | |||
}} |
Revision as of 19:03, 13 September 2013
Short description: | p@chr1:138130615..138130628, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:138130615..138130628, - |
Coexpression cluster: | MCL_coexpression_mm9:107 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
autonomic neuron | 3.06e-41 | 9 |
neural cell | 2.05e-11 | 43 |
ectodermal cell | 4.08e-11 | 44 |
neurectodermal cell | 4.08e-11 | 44 |
neuron | 2.57e-10 | 33 |
neuronal stem cell | 2.57e-10 | 33 |
neuroblast | 2.57e-10 | 33 |
electrically signaling cell | 2.57e-10 | 33 |
central nervous system macrophage | 7.78e-10 | 2 |
microglial cell | 7.78e-10 | 2 |
embryonic cell | 6.07e-09 | 70 |
electrically responsive cell | 1.60e-08 | 39 |
electrically active cell | 1.60e-08 | 39 |
Ontology term | p-value | n |
---|---|---|
autonomic nervous system | 3.06e-41 | 9 |
peripheral nervous system | 1.58e-33 | 11 |
parasympathetic nervous system | 3.66e-15 | 3 |
sympathetic nervous system | 7.68e-15 | 3 |
neural crest-derived structure | 2.18e-14 | 3 |
neural crest | 2.18e-14 | 3 |
enteric nervous system | 2.18e-14 | 3 |
vagal neural crest | 2.18e-14 | 3 |
neural fold | 2.18e-14 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.