FFCP PHASE1:Mm9::chr1:164501625..164501636,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=233|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr1:164501625..164501636,-|id=chr1:164501625..164501636,-|ontology_enrichment_celltype=CL:0000542!1.55e-12!13;CL:0000051!1.55e-12!13;CL:0000838!1.56e-11!12;CL:0000738!7.92e-11!17;CL:0002087!7.92e-11!17;CL:0000791!1.51e-10!9;CL:0000789!1.51e-10!9;CL:0002420!1.51e-10!9;CL:0002419!1.51e-10!9;CL:0000790!1.51e-10!9;CL:0000084!3.39e-10!11;CL:0000827!3.39e-10!11;CL:0000988!8.25e-10!32;CL:0002032!8.25e-10!32;CL:0000037!8.25e-10!32;CL:0000566!8.25e-10!32;CL:0000837!8.25e-10!32;CL:0002031!3.61e-09!25;CL:0000624!4.10e-09!8;CL:0000219!8.21e-07!54|ontology_enrichment_celltype_v019_2=CL:0000838,1.02e-21,12;CL:0000738,1.54e-20,17;CL:0002087,1.54e-20,17;CL:0000791,1.83e-20,9;CL:0000789,1.83e-20,9;CL:0002420,1.83e-20,9;CL:0002419,1.83e-20,9;CL:0000790,1.83e-20,9;CL:0000542,4.84e-20,13;CL:0000051,4.84e-20,13;CL:0000084,9.16e-17,11;CL:0000827,9.16e-17,11;CL:0000624,5.49e-15,8;CL:0002031,7.44e-14,25;CL:0000988,9.83e-11,32;CL:0002032,9.83e-11,32;CL:0000037,9.83e-11,32;CL:0000837,9.83e-11,32;CL:0000625,8.81e-09,1;CL:0000945,2.06e-08,1;CL:0000236,2.06e-08,1;CL:0000826,2.06e-08,1;CL:0000815,2.89e-08,1;CL:0000792,2.89e-08,1;CL:0002320,2.54e-07,46;CL:0000134,2.54e-07,46|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=DOID:0060100,9.09e-11,3;DOID:4045,9.09e-11,3|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0002384,2.54e-07,46|phase1_expression=0,0,0,0,0,0,0,1.03298658753261,6.61706994112834,0.936258105287974,0.171217968225505,0,1.88320802924326,0.437102012094987,0,0,0,0.473193248037357,0.548457734422955,0.84877930359606,0,0.198581902401771,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.51118978442145,0.7813353445238,2.09409497589519,7.64700934440319,2.04913645487534,3.88408282424923,0,0,0,0.782391344348039,0,0.219686182734472,0,0,0,1.51004345451963,3.62681071005672,3.36093799142464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.56276261003168,0.30559649555362,0,0,0,0,0.0755715601067855,0.289864488701678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258937883647172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.292780797011547,0,0,0,0,0.254140454146129,0.149790639404823,0,0,0,0,0,0,0,0,0,0.210441855886474,0.130120442962704,0,0,0,0.204109497453984,0,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0,0.568326998791185,0,0,0,0,0,0,0.232533944750408,0,0,0,0,0.0810688095458557,0,0,0,0,0.205809224758569,0,0,0.213288250535234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167506257441816,0,0,0,0.44292937929755,0,0,0,0,1.50791283939272,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404810701674894,0,0,0,0,0,0.162886959353576,0,0,0.242780636154981,0.302323556964751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178368817602071,0,0.304464949114599,0.704015124191131,0.21183207086382,0,0.16488625294148,0,0,0,0,0,0,0,0.206386867963223,0,0,0,0,0.339956859987711,0.839708713941948,0.829199842826543,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209718688851422,0,0,0,0,0,0,0,0,0,0,0,0,0.201652370273681,0.194915761479505,0.0962118416403295,0,0,0,0,0,0,0.187682475451182,0,0,0,0,0,0,0.171853182343688,0,0,0,0.45032120322422,0.453142408984205,0,0,0,0,0,0,0,0,0,0,0,0,0.188626341386076,0.0936415074698824,0,0,0,0.115884325944855,0,0,0.147198920134397,0,0.177475806159338,0,0.145346416632329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr1:164501625..164501636,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=233 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr1:164501625..164501636,- | |||
|id=chr1:164501625..164501636,- | |||
|ontology_enrichment_celltype=CL:0000542!1.55e-12!13;CL:0000051!1.55e-12!13;CL:0000838!1.56e-11!12;CL:0000738!7.92e-11!17;CL:0002087!7.92e-11!17;CL:0000791!1.51e-10!9;CL:0000789!1.51e-10!9;CL:0002420!1.51e-10!9;CL:0002419!1.51e-10!9;CL:0000790!1.51e-10!9;CL:0000084!3.39e-10!11;CL:0000827!3.39e-10!11;CL:0000988!8.25e-10!32;CL:0002032!8.25e-10!32;CL:0000037!8.25e-10!32;CL:0000566!8.25e-10!32;CL:0000837!8.25e-10!32;CL:0002031!3.61e-09!25;CL:0000624!4.10e-09!8;CL:0000219!8.21e-07!54 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,1.02e-21,12;CL:0000738,1.54e-20,17;CL:0002087,1.54e-20,17;CL:0000791,1.83e-20,9;CL:0000789,1.83e-20,9;CL:0002420,1.83e-20,9;CL:0002419,1.83e-20,9;CL:0000790,1.83e-20,9;CL:0000542,4.84e-20,13;CL:0000051,4.84e-20,13;CL:0000084,9.16e-17,11;CL:0000827,9.16e-17,11;CL:0000624,5.49e-15,8;CL:0002031,7.44e-14,25;CL:0000988,9.83e-11,32;CL:0002032,9.83e-11,32;CL:0000037,9.83e-11,32;CL:0000837,9.83e-11,32;CL:0000625,8.81e-09,1;CL:0000945,2.06e-08,1;CL:0000236,2.06e-08,1;CL:0000826,2.06e-08,1;CL:0000815,2.89e-08,1;CL:0000792,2.89e-08,1;CL:0002320,2.54e-07,46;CL:0000134,2.54e-07,46 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,9.09e-11,3;DOID:4045,9.09e-11,3 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,2.54e-07,46 | |||
|phase1_expression=0,0,0,0,0,0,0,1.03298658753261,6.61706994112834,0.936258105287974,0.171217968225505,0,1.88320802924326,0.437102012094987,0,0,0,0.473193248037357,0.548457734422955,0.84877930359606,0,0.198581902401771,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.51118978442145,0.7813353445238,2.09409497589519,7.64700934440319,2.04913645487534,3.88408282424923,0,0,0,0.782391344348039,0,0.219686182734472,0,0,0,1.51004345451963,3.62681071005672,3.36093799142464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.56276261003168,0.30559649555362,0,0,0,0,0.0755715601067855,0.289864488701678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258937883647172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.292780797011547,0,0,0,0,0.254140454146129,0.149790639404823,0,0,0,0,0,0,0,0,0,0.210441855886474,0.130120442962704,0,0,0,0.204109497453984,0,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0,0.568326998791185,0,0,0,0,0,0,0.232533944750408,0,0,0,0,0.0810688095458557,0,0,0,0,0.205809224758569,0,0,0.213288250535234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167506257441816,0,0,0,0.44292937929755,0,0,0,0,1.50791283939272,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404810701674894,0,0,0,0,0,0.162886959353576,0,0,0.242780636154981,0.302323556964751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178368817602071,0,0.304464949114599,0.704015124191131,0.21183207086382,0,0.16488625294148,0,0,0,0,0,0,0,0.206386867963223,0,0,0,0,0.339956859987711,0.839708713941948,0.829199842826543,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209718688851422,0,0,0,0,0,0,0,0,0,0,0,0,0.201652370273681,0.194915761479505,0.0962118416403295,0,0,0,0,0,0,0.187682475451182,0,0,0,0,0,0,0.171853182343688,0,0,0,0.45032120322422,0.453142408984205,0,0,0,0,0,0,0,0,0,0,0,0,0.188626341386076,0.0936415074698824,0,0,0,0.115884325944855,0,0,0.147198920134397,0,0.177475806159338,0,0.145346416632329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr1:164501625..164501636,- | |||
}} |
Revision as of 19:27, 13 September 2013
Short description: | p@chr1:164501625..164501636, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:164501625..164501636, - |
Coexpression cluster: | MCL_coexpression_mm9:233 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 1.02e-21 | 12 |
leukocyte | 1.54e-20 | 17 |
nongranular leukocyte | 1.54e-20 | 17 |
mature alpha-beta T cell | 1.83e-20 | 9 |
alpha-beta T cell | 1.83e-20 | 9 |
immature T cell | 1.83e-20 | 9 |
mature T cell | 1.83e-20 | 9 |
immature alpha-beta T cell | 1.83e-20 | 9 |
lymphocyte | 4.84e-20 | 13 |
common lymphoid progenitor | 4.84e-20 | 13 |
T cell | 9.16e-17 | 11 |
pro-T cell | 9.16e-17 | 11 |
CD4-positive, alpha-beta T cell | 5.49e-15 | 8 |
hematopoietic lineage restricted progenitor cell | 7.44e-14 | 25 |
hematopoietic cell | 9.83e-11 | 32 |
hematopoietic oligopotent progenitor cell | 9.83e-11 | 32 |
hematopoietic stem cell | 9.83e-11 | 32 |
hematopoietic multipotent progenitor cell | 9.83e-11 | 32 |
CD8-positive, alpha-beta T cell | 8.81e-09 | 1 |
lymphocyte of B lineage | 2.06e-08 | 1 |
B cell | 2.06e-08 | 1 |
pro-B cell | 2.06e-08 | 1 |
regulatory T cell | 2.89e-08 | 1 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 2.89e-08 | 1 |
connective tissue cell | 2.54e-07 | 46 |
mesenchymal cell | 2.54e-07 | 46 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 2.54e-07 | 46 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 9.09e-11 | 3 |
muscle cancer | 9.09e-11 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.