Personal tools

FFCP PHASE1:Mm9::chr1:182571461..182571505,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 1: Line 1:
{{FFCP
{{FFCP|EntrezGene=72568|HGNC=|MCL_coexpression_id=364|UniProt=Q8C735|association_with_transcript=0bp_to_ENSMUST00000085803,ENSMUST00000085804,NM_001103182,NM_175186,uc007dwj.2,uc007dwk.2,uc007dwl.2,uc007dwm.2,uc011wxp.1_5end|description=CAGE_peak_1_at_Lin9_5end|id=chr1:182571461..182571505,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004177!2.05e-08!29;UBERON:0001048!6.37e-08!147|ontology_enrichment_uberon_v019_2=UBERON:0001048,8.52e-09,134;UBERON:0004177,1.97e-08,29;UBERON:0005057,1.97e-08,29|phase1_expression=7.68714466103011,2.09385244583617,1.36499771816861,1.51232105653415,2.50447864973174,5.87577451691614,6.54115393667472,13.2997023144824,14.0788722151667,15.2141942109296,8.04724450659873,7.09972215058494,13.8672591244277,14.5117868015536,10.6595123781012,21.2599030759317,20.2872944657163,10.7257136221801,13.3001000597567,13.580468857537,9.52484849691981,11.5177503393027,13.8435888243636,6.23970448894286,5.04700418347774,2.8711598205751,2.15380998079537,2.37018355954478,6.65081968097309,3.52842181663903,3.76941868114018,9.52546010189447,8.61090702618398,0,8.95440021228951,11.9688944658114,14.2918549383658,13.393012183581,7.0320181007142,15.7057123192139,8.2352408324342,12.294818729252,15.0508209439658,4.78407908307194,3.34543873024398,3.48738829107195,3.12956537739216,0.436050312760893,0.219686182734472,0.777719596297134,0.979904951377538,1.43752564364972,12.080347636157,10.1550699881588,13.1076581665561,2.82985379639542,3.15186783932632,2.57836046138721,4.45096213891115,4.23192783417626,1.90149421051854,1.69422266034566,1.77858959222228,0.899899717281399,0.988866362566974,2.8419204597844,2.39680088414724,1.92109152660777,9.43575472007147,5.40023753326763,6.09942387919008,2.28520787523043,0.662605622854841,7.34944795289724,7.57179221044067,2.75765635983006,1.10115880999389,2.042997409363,2.15049146558741,3.42904348098504,3.47653045689157,3.12548022334056,1.11673199600552,2.25105044012672,1.83357897332172,2.65165726926301,4.41352210477219,3.16879057903011,4.01348824665875,8.38844317185319,6.37701875143691,1.72084775396277,0.679971333707751,3.2382191498269,5.19821133958135,5.37632264516803,5.19644354487482,9.20323741921512,8.57293815189467,4.59341446863442,5.7745802108439,3.84979432242953,5.09610479413291,0,7.79367747640371,10.1343946190039,12.6381111253696,6.2801133845483,21.2329064590681,3.85949561568544,7.45986905094384,5.78484408793068,5.07354093963329,6.0289056221049,8.58397562090645,5.52933001850572,4.94389935468748,6.50697106139602,14.153768831198,7.44127509758082,13.9130156630048,13.091631834651,1.86391761218122,4.9772735491963,6.0739544975902,6.38642638021478,18.3317140494058,10.1983464268879,17.2815508819368,2.99581278809645,1.83000241127451,7.03664371832041,2.43354048269187,2.04572365864264,1.24672826735736,2.59586020908412,8.1471491080253,9.08170885453679,3.53811861807145,2.31486041475121,12.6216829673823,6.43725892413724,13.1445354757905,11.7549757911858,13.5392633311142,12.6832583082001,12.5560310910037,3.62184719034622,9.7005596819779,16.6413350547681,14.7798944297717,9.86380795924087,12.7901734643775,18.1091126591527,13.7874031393322,10.5488161413801,6.31991868581911,12.0953516343916,15.6289924667576,11.3919174894526,10.0846205791871,12.7844063637321,12.5474709860161,14.1670246858131,12.3413690309903,10.4640275137684,8.85302224618743,8.52386999280337,10.2027106946358,7.88003827579657,4.70199095365963,3.07019973593198,5.70830299756732,2.95254121272818,2.94405927989778,7.30622747892919,2.31293148088659,3.96675849995316,11.0909890278322,12.3085436086032,13.2733485161756,9.88249270654378,7.33847544688072,6.65789691393957,4.74529061544512,5.59976446061637,7.28872105520782,7.16243299348143,5.8489226135736,6.29173586057955,6.48414149624083,5.97423819763102,7.96605184002943,13.8240700257772,11.270773567308,12.8300336542548,11.8311017172252,9.46833568519301,9.04282480876879,5.60918562322488,5.65195420228949,3.94870924549762,5.33614728756868,16.3508203601772,14.9384836286034,18.6635553279429,17.6488305607998,17.8471098216788,13.7497959961967,8.91858026097513,10.2145192868272,7.13859674289012,12.9391385874619,5.58211421502755,9.04909252032226,6.31447194867779,6.63770430031075,1.4473305640901,4.24932337383191,7.95863929436036,15.3187077855504,14.0888421193406,17.6017686216377,13.4005005953453,9.28370199455454,4.87834119644497,10.8768249433272,8.41565820665345,9.08892181347676,6.882259218061,3.45369963731791,4.19482269886384,7.53956419696361,5.4390568381871,13.277635371514,11.0374698521893,1.44495530989013,1.75817529888305,7.21313759657372,6.5642441073137,11.042787679569,12.4940398174924,10.9865932843727,11.9484398976276,8.02075226696619,11.0399847007645,8.50102473517278,10.2289550268959,8.69633111482352,3.85585579706168,7.52282451603824,5.52003371368491,7.65568708961808,6.92874516484649,1.32745138339963,10.4395673546642,5.74414758233027,6.60117779145643,3.2483208216885,5.53383266299069,4.65170927702798,10.5424781548477,9.9819265947722,7.26884543252377,6.32511651449993,7.21948802737308,1.36175842301515,12.0640933000978,6.07985813778946,5.78709994585299,7.09360934569094,8.38333442729732,5.26556865926787,2.74018454203139,7.74416636610244,9.10877904714427,2.8668691747145,5.93590510589328,16.9537648030701,14.2338502830448,8.47543642422269,8.69946768648825,3.49777003955821,3.15223013417866,12.1318325366475,10.5257302661243,14.6303676622072,17.8950034154456,22.5545475739692,14.6418030852174,14.10820968949,14.8348539463077,15.2019971184866,2.86401185404534,13.2861117304077,13.2157653632452,10.8005340821801,10.0362382086945,8.7345025498471,10.3845546716312,8.67861285116027,3.14107130380836,5.4438288782553,3.10669656543463,23.1114104860518,11.0642244072544,9.43113395605456,10.3059129822345,8.13706887909706,11.6579726588637,11.6183666259296,8.72369378454466,8.703325587334,28.2653421366427,21.6022504693399,18.3286449964343,6.68993210457542,8.73043135901032,15.5904987573354,17.1865627840782,19.6694541233452,19.8322491707949,24.3687719838052,25.8474111867258,26.4437619092849,26.1139819504417,26.9958329649114,22.4173591021968,25.7129184799452,2.26730383615211,17.314904363177,28.1701509753754,14.4380770073107,2.70465431645067,4.129014459926,6.41030684935428,5.14484109789758,3.00943262421218,2.82375921308533,3.68260189205742,1.71868654031819,3.09335728218638,5.48066015816514,3.0215755895588,1.35004500046361,3.60256962579376,2.71885445390523,2.07104124700728,11.0014588439227,24.3405172774629,10.9269507682646,10.2104821168684,8.80375283037526,5.88299227040045,9.33436256766784,8.44743734679466,6.73930340142812,10.1078884705519,9.63221339582911,9.05406438653166,9.08322622457859,10.1799992323742,9.5342878466318,8.09699275181225,9.38663040153329,7.7163688185482,7.82963211526283,11.1871179302142,13.0290315906458,8.5188386956482,12.1602456873134,7.26732083161643,10.540250606517,10.0691383391095,10.7927503994936,8.41823076601097,9.09887562767274,9.53941861818155,9.13489639556141,8.17587203717177,8.59385190656348,9.91595783590182,9.45242393807593,4.49659040288303,6.08222181958062,8.80971321598023,6.50380329034067,7.72069966918304,7.88350641109433|short_description=p1@Lin9}}
|EntrezGene=72568
|HGNC=
|MCL_coexpression_id=364
|UniProt=Q8C735
|association_with_transcript=0bp_to_ENSMUST00000085803,ENSMUST00000085804,NM_001103182,NM_175186,uc007dwj.2,uc007dwk.2,uc007dwl.2,uc007dwm.2,uc011wxp.1_5end
|description=CAGE_peak_1_at_Lin9_5end
|id=chr1:182571461..182571505,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004177!2.05e-08!29;UBERON:0001048!6.37e-08!147
|ontology_enrichment_uberon_v019_2=UBERON:0001048,8.52e-09,134;UBERON:0004177,1.97e-08,29;UBERON:0005057,1.97e-08,29
|phase1_expression=7.68714466103011,2.09385244583617,1.36499771816861,1.51232105653415,2.50447864973174,5.87577451691614,6.54115393667472,13.2997023144824,14.0788722151667,15.2141942109296,8.04724450659873,7.09972215058494,13.8672591244277,14.5117868015536,10.6595123781012,21.2599030759317,20.2872944657163,10.7257136221801,13.3001000597567,13.580468857537,9.52484849691981,11.5177503393027,13.8435888243636,6.23970448894286,5.04700418347774,2.8711598205751,2.15380998079537,2.37018355954478,6.65081968097309,3.52842181663903,3.76941868114018,9.52546010189447,8.61090702618398,0,8.95440021228951,11.9688944658114,14.2918549383658,13.393012183581,7.0320181007142,15.7057123192139,8.2352408324342,12.294818729252,15.0508209439658,4.78407908307194,3.34543873024398,3.48738829107195,3.12956537739216,0.436050312760893,0.219686182734472,0.777719596297134,0.979904951377538,1.43752564364972,12.080347636157,10.1550699881588,13.1076581665561,2.82985379639542,3.15186783932632,2.57836046138721,4.45096213891115,4.23192783417626,1.90149421051854,1.69422266034566,1.77858959222228,0.899899717281399,0.988866362566974,2.8419204597844,2.39680088414724,1.92109152660777,9.43575472007147,5.40023753326763,6.09942387919008,2.28520787523043,0.662605622854841,7.34944795289724,7.57179221044067,2.75765635983006,1.10115880999389,2.042997409363,2.15049146558741,3.42904348098504,3.47653045689157,3.12548022334056,1.11673199600552,2.25105044012672,1.83357897332172,2.65165726926301,4.41352210477219,3.16879057903011,4.01348824665875,8.38844317185319,6.37701875143691,1.72084775396277,0.679971333707751,3.2382191498269,5.19821133958135,5.37632264516803,5.19644354487482,9.20323741921512,8.57293815189467,4.59341446863442,5.7745802108439,3.84979432242953,5.09610479413291,0,7.79367747640371,10.1343946190039,12.6381111253696,6.2801133845483,21.2329064590681,3.85949561568544,7.45986905094384,5.78484408793068,5.07354093963329,6.0289056221049,8.58397562090645,5.52933001850572,4.94389935468748,6.50697106139602,14.153768831198,7.44127509758082,13.9130156630048,13.091631834651,1.86391761218122,4.9772735491963,6.0739544975902,6.38642638021478,18.3317140494058,10.1983464268879,17.2815508819368,2.99581278809645,1.83000241127451,7.03664371832041,2.43354048269187,2.04572365864264,1.24672826735736,2.59586020908412,8.1471491080253,9.08170885453679,3.53811861807145,2.31486041475121,12.6216829673823,6.43725892413724,13.1445354757905,11.7549757911858,13.5392633311142,12.6832583082001,12.5560310910037,3.62184719034622,9.7005596819779,16.6413350547681,14.7798944297717,9.86380795924087,12.7901734643775,18.1091126591527,13.7874031393322,10.5488161413801,6.31991868581911,12.0953516343916,15.6289924667576,11.3919174894526,10.0846205791871,12.7844063637321,12.5474709860161,14.1670246858131,12.3413690309903,10.4640275137684,8.85302224618743,8.52386999280337,10.2027106946358,7.88003827579657,4.70199095365963,3.07019973593198,5.70830299756732,2.95254121272818,2.94405927989778,7.30622747892919,2.31293148088659,3.96675849995316,11.0909890278322,12.3085436086032,13.2733485161756,9.88249270654378,7.33847544688072,6.65789691393957,4.74529061544512,5.59976446061637,7.28872105520782,7.16243299348143,5.8489226135736,6.29173586057955,6.48414149624083,5.97423819763102,7.96605184002943,13.8240700257772,11.270773567308,12.8300336542548,11.8311017172252,9.46833568519301,9.04282480876879,5.60918562322488,5.65195420228949,3.94870924549762,5.33614728756868,16.3508203601772,14.9384836286034,18.6635553279429,17.6488305607998,17.8471098216788,13.7497959961967,8.91858026097513,10.2145192868272,7.13859674289012,12.9391385874619,5.58211421502755,9.04909252032226,6.31447194867779,6.63770430031075,1.4473305640901,4.24932337383191,7.95863929436036,15.3187077855504,14.0888421193406,17.6017686216377,13.4005005953453,9.28370199455454,4.87834119644497,10.8768249433272,8.41565820665345,9.08892181347676,6.882259218061,3.45369963731791,4.19482269886384,7.53956419696361,5.4390568381871,13.277635371514,11.0374698521893,1.44495530989013,1.75817529888305,7.21313759657372,6.5642441073137,11.042787679569,12.4940398174924,10.9865932843727,11.9484398976276,8.02075226696619,11.0399847007645,8.50102473517278,10.2289550268959,8.69633111482352,3.85585579706168,7.52282451603824,5.52003371368491,7.65568708961808,6.92874516484649,1.32745138339963,10.4395673546642,5.74414758233027,6.60117779145643,3.2483208216885,5.53383266299069,4.65170927702798,10.5424781548477,9.9819265947722,7.26884543252377,6.32511651449993,7.21948802737308,1.36175842301515,12.0640933000978,6.07985813778946,5.78709994585299,7.09360934569094,8.38333442729732,5.26556865926787,2.74018454203139,7.74416636610244,9.10877904714427,2.8668691747145,5.93590510589328,16.9537648030701,14.2338502830448,8.47543642422269,8.69946768648825,3.49777003955821,3.15223013417866,12.1318325366475,10.5257302661243,14.6303676622072,17.8950034154456,22.5545475739692,14.6418030852174,14.10820968949,14.8348539463077,15.2019971184866,2.86401185404534,13.2861117304077,13.2157653632452,10.8005340821801,10.0362382086945,8.7345025498471,10.3845546716312,8.67861285116027,3.14107130380836,5.4438288782553,3.10669656543463,23.1114104860518,11.0642244072544,9.43113395605456,10.3059129822345,8.13706887909706,11.6579726588637,11.6183666259296,8.72369378454466,8.703325587334,28.2653421366427,21.6022504693399,18.3286449964343,6.68993210457542,8.73043135901032,15.5904987573354,17.1865627840782,19.6694541233452,19.8322491707949,24.3687719838052,25.8474111867258,26.4437619092849,26.1139819504417,26.9958329649114,22.4173591021968,25.7129184799452,2.26730383615211,17.314904363177,28.1701509753754,14.4380770073107,2.70465431645067,4.129014459926,6.41030684935428,5.14484109789758,3.00943262421218,2.82375921308533,3.68260189205742,1.71868654031819,3.09335728218638,5.48066015816514,3.0215755895588,1.35004500046361,3.60256962579376,2.71885445390523,2.07104124700728,11.0014588439227,24.3405172774629,10.9269507682646,10.2104821168684,8.80375283037526,5.88299227040045,9.33436256766784,8.44743734679466,6.73930340142812,10.1078884705519,9.63221339582911,9.05406438653166,9.08322622457859,10.1799992323742,9.5342878466318,8.09699275181225,9.38663040153329,7.7163688185482,7.82963211526283,11.1871179302142,13.0290315906458,8.5188386956482,12.1602456873134,7.26732083161643,10.540250606517,10.0691383391095,10.7927503994936,8.41823076601097,9.09887562767274,9.53941861818155,9.13489639556141,8.17587203717177,8.59385190656348,9.91595783590182,9.45242393807593,4.49659040288303,6.08222181958062,8.80971321598023,6.50380329034067,7.72069966918304,7.88350641109433
|short_description=p1@Lin9
}}

Revision as of 19:56, 13 September 2013

Short description:p1@Lin9
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Lin9_5end
Coexpression cluster:MCL_coexpression_mm9:364
Association with transcript: 0bp_to_ENSMUST00000085803, ENSMUST00000085804, NM_001103182, NM_175186, uc007dwj.2, uc007dwk.2, uc007dwl.2, uc007dwm.2, uc011wxp.1_5end
EntrezGene:Lin9
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Lin9

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G77.69
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I52.09
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I61.36
CD326+ enterocyte, pool1.CNhs13542.11848-124I31.51
CD326+ enterocyte, pool2.CNhs13197.11849-124I42.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I75.88
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I86.54
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E913.30
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E714.08
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F215.21
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E68.05
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F17.10
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E413.87
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E814.51
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A110.66
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A321.26
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A520.29
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A210.73
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A413.30
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A613.58
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A39.52
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H211.52
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I913.84
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D16.24
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D25.05
GP2+ M cell, pool1.CNhs13228.11845-124H92.87
GP2+ M cell, pool2.CNhs13231.11846-124I12.15
GP2+ M cell, pool3.CNhs13240.11847-124I22.37
Ileum epithelium, pool1.CNhs13199.10252-104B96.65
Ileum epithelium, pool2.CNhs13232.10253-104C13.53
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C83.77
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I39.53
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G68.61
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F58.95
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F611.97
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F714.29
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G813.39
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H17.03
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H315.71
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G98.24
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H212.29
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H415.05
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D84.78
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D93.35
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B33.49
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B73.13
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.44
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.22
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.78
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.98
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A212.08
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I910.16
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A113.11
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C12.83
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E13.15
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C52.58
Mouse Granule cells, donor1.CNhs12131.11713-123C34.45
Mouse Granule cells, donor2.CNhs12357.11731-123E34.23
Mouse Granule cells, donor3.CNhs12108.11636-122C71.90
Mouse Meningeal cells, donor1.CNhs12132.11716-123C61.69
Mouse Meningeal cells, donor3.CNhs12109.11639-122D11.78
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.90
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.99
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D22.84
Mouse Microglia, donor1.CNhs12629.11718-123C82.40
Mouse Microglia, donor2.CNhs12634.11736-123E81.92
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D59.44
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F55.40
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D96.10
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F12.29
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.66
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D27.35
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F27.57
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D62.76
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F32.04
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D72.15
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D43.43
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F43.48
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D83.13
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.12
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E52.25
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.83
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D62.65
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F64.41
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E13.17
Mouse Schwann, donor1.CNhs12507.11728-123D94.01
Mouse Schwann, donor2.CNhs12573.11746-123F98.39
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G36.38
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F71.72
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.68
Mouse hepatocyte, donor3.CNhs12615.11637-122C83.24
Mouse hepatocyte, donor6.CNhs13090.11822-124F45.20
Mouse hepatocyte, donor8.CNhs13091.11824-124F65.38
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A75.20
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I79.20
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E38.57
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I84.59
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G65.77
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H13.85
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I85.10
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G17.79
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G210.13
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G312.64
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B66.28
accessory axillary lymph node, adult.CNhs10475.1063-29H921.23
adrenal gland, adult.CNhs10508.49-24D73.86
adrenal gland, embryo E14.CNhs11038.406-44C57.46
adrenal gland, embryo E16.CNhs11004.1254-43D65.78
adrenal gland, embryo E17.CNhs11043.1263-45I15.07
adrenal gland, embryo E18.CNhs11026.1262-18F56.03
adrenal gland, neonate N00.CNhs11191.1311-23C18.58
adrenal gland, neonate N25.CNhs11223.1377-27I35.53
amnion, adult pregnant day17.5.CNhs10488.583-22A84.94
aorta, adult.CNhs10498.46-23H16.51
bone (os femoris), adult.CNhs10483.56-12G214.15
bone (os femoris), neonate N02.CNhs11227.1985-43F57.44
bone (os femoris), neonate N16.CNhs11225.1525-43A613.91
bone (os femoris), neonate N20.CNhs11195.1350-25C313.09
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B24.98
cerebellum, neonate N30.CNhs11135.1395-42I26.07
colon, adult.CNhs10468.36-18H76.39
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C718.33
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D110.20
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D417.28
corpora quadrigemina, adult.CNhs10501.16-22A43.00
corpus striatum, adult.CNhs10487.19-21D81.83
corpus striatum, neonate N00.CNhs11226.630-43F17.04
cortex, adult.CNhs10473.12-14D52.43
cortex, neonate N30.CNhs11107.1392-42F22.05
diencephalon, adult.CNhs10482.20-12F21.25
diencephalon, neonate N30.CNhs11201.1388-42B22.60
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B18.15
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A29.08
epididymis, adult.CNhs10490.58-23B23.54
eyeball, adult.CNhs10484.31-12G42.31
eyeball, embryo E12.CNhs11016.345-16C612.62
eyeball, embryo E14.CNhs10521.399-16E26.44
eyeball, embryo E15.CNhs10593.426-16C913.14
eyeball, embryo E17.CNhs11023.1261-18D411.75
eyeball, neonate N00.CNhs11207.633-15C613.54
eyeball, neonate N01.CNhs11140.1532-43E712.68
eyeball, neonate N02.CNhs11205.1551-44G812.56
eyeball, neonate N16.CNhs11188.777-19A23.62
forelimb, embryo E11.CNhs10596.335-25E29.70
forelimb, embryo E12.CNhs10600.359-14H216.64
forelimb, embryo E13.CNhs10589.384-1E214.78
forelimb, embryo E14.CNhs10577.413-26A89.86
forelimb, embryo E15.CNhs11007.437-20E712.79
forelimb, embryo E17.CNhs10598.1517-43C418.11
forelimb, embryo E18.CNhs11008.1520-43B513.79
gonad, embryo E13.CNhs11044.1564-45I610.55
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C86.32
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D212.10
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D515.63
heart, embryo E11.CNhs10586.331-24E911.39
heart, embryo E12.CNhs11015.353-12F510.08
heart, embryo E13.CNhs11013.376-3I912.78
heart, embryo E14.CNhs10597.403-26D412.55
heart, embryo E15.CNhs11017.431-16C814.17
heart, embryo E16.CNhs11021.457-17C612.34
heart, embryo E17.CNhs11025.479-18E510.46
heart, embryo E18.CNhs11030.1283-20G38.85
heart, neonate N00.CNhs11213.639-21E38.52
heart, neonate N03.CNhs11221.1349-25I210.20
heart, neonate N10.CNhs11118.749-24G17.88
heart, neonate N16.CNhs11209.782-15G14.70
heart, neonate N20.CNhs11127.821-26I63.07
heart, neonate N25.CNhs11196.1351-25D35.71
heart, neonate N30.CNhs11202.1390-42D22.95
hippocampus, adult.CNhs10478.13-16E82.94
hippocampus, neonate N00.CNhs11228.627-43G17.31
intestinal mucosa, adult.CNhs10506.860-29I32.31
intestine, adult.CNhs10496.178-9A33.97
intestine, embryo E12.CNhs11019.1251-16I511.09
intestine, embryo E13.CNhs11010.381-16D512.31
intestine, embryo E15.CNhs10602.976-16D813.27
intestine, embryo E16.CNhs10585.463-22H49.88
intestine, embryo E17.CNhs10582.482-18D37.34
intestine, embryo E18.CNhs10526.1289-20F76.66
intestine, neonate N00.CNhs11126.644-26D14.75
intestine, neonate N01.CNhs11192.1322-23E95.60
intestine, neonate N06.CNhs11102.688-20B87.29
intestine, neonate N07.CNhs11095.720-20F27.16
intestine, neonate N10.CNhs11098.755-23A55.85
intestine, neonate N20.CNhs11187.827-18D16.29
intestine, neonate N25.CNhs11121.1352-25E36.48
intestine, neonate N30.CNhs11131.1384-42G15.97
kidney, embryo E14.CNhs10606.411-4I97.97
kidney, embryo E15.CNhs10997.434-16F813.82
kidney, embryo E16.CNhs10584.464-22A511.27
kidney, embryo E17.CNhs11028.483-18I212.83
kidney, embryo E18.CNhs11001.1288-20C711.83
kidney, neonate N00.CNhs11214.646-21G79.47
kidney, neonate N10.CNhs11206.758-6D59.04
kidney, neonate N20.CNhs11113.832-19I15.61
kidney, neonate N25.CNhs11122.1353-25F35.65
kidney, neonate N30.CNhs11203.1385-42H13.95
liver, adult pregnant day01.CNhs10466.508-5B25.34
liver, embryo E12.CNhs10601.355-15F816.35
liver, embryo E13.CNhs10524.378-3H614.94
liver, embryo E14.CNhs10594.409-16E118.66
liver, embryo E15.CNhs10520.433-16D717.65
liver, embryo E16.CNhs10523.462-17F517.85
liver, embryo E17.CNhs10510.481-18A313.75
liver, embryo E18.CNhs10579.499-43G48.92
liver, neonate N00.CNhs11117.641-24F410.21
liver, neonate N03.CNhs11123.1345-25G27.14
liver, neonate N06.CNhs11101.684-20A812.94
liver, neonate N07.CNhs11103.716-20H25.58
liver, neonate N10.CNhs11115.751-24B99.05
liver, neonate N20.CNhs11220.823-25A36.31
liver, neonate N25.CNhs11198.1368-26H16.64
liver, neonate N30.CNhs11106.1382-42D11.45
lung, adult.CNhs10474.28-22B14.25
lung, embryo E12.CNhs10522.354-16G27.96
lung, embryo E14.CNhs10604.404-26F815.32
lung, embryo E15.CNhs11020.432-17C514.09
lung, embryo E16.CNhs10998.458-17B617.60
lung, embryo E17.CNhs10605.480-44A613.40
lung, embryo E18.CNhs10583.1287-20I69.28
lung, neonate N00.CNhs11224.640-42C64.88
lung, neonate N06.CNhs11212.683-20E510.88
lung, neonate N07.CNhs11111.715-19A38.42
lung, neonate N10.CNhs11219.750-23E69.09
lung, neonate N20.CNhs11109.822-18A46.88
lung, neonate N25.CNhs11119.1359-25C73.45
lung, neonate N30.CNhs11133.1394-42H24.19
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A17.54
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A15.44
mammary gland, adult lactating day02.CNhs10480.595-22B613.28
mammary gland, adult pregnant day19.CNhs10476.588-5H211.04
medulla oblongata, adult.CNhs10477.17-12C21.44
medulla oblongata, neonate N30.CNhs11200.1396-42A31.76
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C77.21
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C26.56
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E111.04
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E212.49
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E310.99
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D711.95
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D88.02
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D911.04
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D48.50
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D510.23
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D68.70
olfactory brain, adult.CNhs10489.18-22I93.86
ovary, adult.CNhs10507.91-2I77.52
ovary, embryo E18.CNhs11040.505-44H75.52
ovary, neonate N00.CNhs11217.1299-22I47.66
oviduct, adult pregnant day01.CNhs10500.988-6G66.93
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F410.44
pancreas, embryo E15.CNhs11042.1556-45F25.74
pancreas, embryo E16.CNhs11003.460-26E56.60
pancreas, embryo E17.CNhs10599.1558-45G33.25
pancreas, embryo E18.CNhs10580.1535-43I75.53
pancreas, neonate N00.CNhs11105.645-26G94.65
pancreas, neonate N01.CNhs11138.1531-43D710.54
pancreas, neonate N02.CNhs11139.1539-43D89.98
pancreas, neonate N16.CNhs11136.787-43B67.27
pancreas, neonate N25.CNhs11094.1555-45E26.33
pancreas, neonate N30.CNhs11182.1548-44H57.22
pituitary gland, adult.CNhs10493.21-1G81.36
pituitary gland, embryo E12.CNhs11018.346-16E612.06
pituitary gland, embryo E13.CNhs11009.370-44C76.08
pituitary gland, embryo E14.CNhs11037.398-44A55.79
pituitary gland, embryo E15.CNhs10592.427-16B97.09
pituitary gland, embryo E16.CNhs11036.449-43F68.38
pituitary gland, embryo E17.CNhs11039.1265-44F55.27
pituitary gland, neonate N00.CNhs11190.1308-22E92.74
placenta, adult pregnant day10.CNhs10472.539-13I77.74
placenta, adult pregnant day17.CNhs10464.577-18G39.11
prostate, adult.CNhs10470.859-1F82.87
skin, adult.CNhs10492.30-1C35.94
skin, neonate N00.CNhs11124.650-25G416.95
skin, neonate N03.CNhs11215.662-22H314.23
skin, neonate N06.CNhs11097.693-20I58.48
skin, neonate N10.CNhs11108.762-6C48.70
small intestine, neonate N16.CNhs11114.790-21I13.50
spinal cord, adult.CNhs10505.24-13C93.15
spleen, adult.CNhs10465.25-2G212.13
spleen, embryo E16.CNhs11035.461-43C110.53
spleen, embryo E18.CNhs11011.1271-21F214.63
spleen, neonate N10.CNhs11116.752-24D117.90
spleen, neonate N20.CNhs11112.824-19H122.55
spleen, neonate N25.CNhs11099.1354-25G314.64
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C614.11
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C914.83
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D315.20
stomach, adult.CNhs10503.33-1H62.86
stomach, embryo E12.CNhs10588.356-43E313.29
stomach, embryo E15.CNhs10603.1252-16G813.22
stomach, embryo E16.CNhs11022.459-17D410.80
stomach, embryo E17.CNhs11006.1035-18D510.04
stomach, embryo E18.CNhs10999.1286-20C68.73
stomach, neonate N03.CNhs11193.1340-24B810.38
stomach, neonate N07.CNhs11210.718-18A98.68
stomach, neonate N25.CNhs11104.1355-25E43.14
stomach, neonate N30.CNhs11134.1386-42I15.44
submandibular gland, adult.CNhs10469.59-29C13.11
testis, adult.CNhs10504.57-7G523.11
testis, embryo E13.CNhs11031.389-23F511.06
testis, embryo E15.CNhs11034.443-27C59.43
testis, embryo E16.CNhs11033.470-26G510.31
testis, embryo E17.CNhs11029.486-18I58.14
testis, embryo E18.CNhs11027.503-18G511.66
testis, neonate N00.CNhs11189.1300-22B711.62
testis, neonate N07.CNhs11222.726-26I48.72
testis, neonate N10.CNhs11204.763-44D98.70
testis, neonate N20.CNhs11110.839-18H328.27
testis, neonate N30.CNhs11130.1391-42E221.60
thymus, adult.CNhs10471.38-12B518.33
thymus, embryo E14.CNhs11041.402-44I46.69
thymus, embryo E15.CNhs11005.430-45I28.73
thymus, embryo E16.CNhs11002.456-26C515.59
thymus, embryo E17.CNhs10581.478-18C117.19
thymus, embryo E18.CNhs10595.1273-19G419.67
thymus, neonate N02.CNhs11181.1541-43F819.83
thymus, neonate N03.CNhs11137.2104-43C724.37
thymus, neonate N06.CNhs11197.681-26C425.85
thymus, neonate N07.CNhs11211.713-19D326.44
thymus, neonate N10.CNhs11194.748-24E426.11
thymus, neonate N20.CNhs11186.820-7A227.00
thymus, neonate N25.CNhs11125.1362-25G722.42
thymus, neonate N30.CNhs11132.1393-42G225.71
tongue, adult.CNhs10499.32-1B42.27
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H317.31
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F728.17
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G514.44
urinary bladder, adult.CNhs10481.879-12E42.70
uterus, adult pregnant day19.CNhs10497.590-15F54.13
uterus, adult.CNhs10509.92-27E56.41
vagina, adult.CNhs10502.89-27D55.14
vesicular gland, adult.CNhs10491.51-27F83.01
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A12.82
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A23.68
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A31.72
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D73.09
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A45.48
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A53.02
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A61.35
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A73.60
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A82.72
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A92.07
whole body, embryo E11.CNhs11014.324-5I811.00
whole body, embryo E12.CNhs10587.857-27C924.34
whole body, embryo E13.CNhs10512.372-23H210.93
whole body, embryo E14.5.CNhs10578.420-27D210.21
whole body, embryo E14.CNhs10519.395-14B18.80
whole body, embryo E16.CNhs10514.453-14F25.88
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G59.33
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G58.45
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G56.74
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G510.11
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G59.63
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G59.05
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G59.08
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G510.18
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G59.53
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G58.10
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G59.39
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G57.72
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G57.83
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G511.19
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G513.03
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G58.52
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G512.16
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G57.27
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G510.54
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G510.07
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G510.79
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G58.42
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G59.10
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G59.54
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G59.13
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G58.18
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G58.59
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G59.92
whole body, embryo E17.5.CNhs10513.490-9F99.45
whole body, embryo E17.CNhs10517.475-3I54.50
whole body, embryo E18.CNhs10516.493-3B36.08
whole body, neonate N00.CNhs10525.657-19C28.81
whole body, neonate N01.CNhs10576.659-23C66.50
whole body, neonate N06.CNhs10515.692-21D17.72
whole body, neonate N10.CNhs10518.761-6B47.88





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
primordium8.52e-09134
hemopoietic organ1.97e-0829
immune organ1.97e-0829







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr1:182571461..182571505,%2B&oldid=2968685"