FFCP PHASE1:Hg19::chr6:3028692..3028697,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=W|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C2572|description=CAGE_peak_at_chr6:3028692..3028697,+|id=chr6:3028692..3028697,+|ontology_enrichment_celltype=CL:0000037!7.88e-17!172;CL:0000566!7.88e-17!172;CL:0000988!5.86e-15!182;CL:0002032!1.02e-14!165;CL:0000837!1.02e-14!165;CL:0000763!7.32e-12!112;CL:0000049!7.32e-12!112;CL:0000738!4.28e-11!140;CL:0002087!2.70e-10!119;CL:0002031!2.01e-09!124;CL:0000839!9.31e-08!70;CL:0002194!9.47e-08!63;CL:0000576!9.47e-08!63;CL:0000040!9.47e-08!63;CL:0000559!9.47e-08!63;CL:0002057!1.51e-07!42;CL:0002009!2.51e-07!65;CL:0000557!8.13e-07!71;CL:0000860!9.74e-07!45|ontology_enrichment_celltype_v019=CL:0000784;7.35e-12;3!CL:0002127;3.91e-10;1!CL:0000911;3.91e-10;1!CL:0000814;3.91e-10;1|ontology_enrichment_celltype_v019_2=CL:0000784,6.23e-12,3;CL:0002127,4.09e-10,1;CL:0000914,4.09e-10,1;CL:0000911,4.09e-10,1;CL:0000814,4.09e-10,1;CL:0002042,4.09e-10,1;CL:0002039,4.09e-10,1;CL:0002040,4.09e-10,1;CL:0002041,4.09e-10,1;CL:0000037,8.91e-10,168;CL:0000988,3.87e-09,177;CL:0002032,1.33e-07,161;CL:0000837,1.33e-07,161|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:2531!2.97e-16!51;DOID:0060083!2.97e-16!51;DOID:1036!1.07e-13!8;DOID:1240!7.44e-13!39;DOID:0050686!5.62e-08!137;DOID:0060058!9.77e-08!10|ontology_enrichment_disease_v019=DOID:1036;5.00e-37;8!DOID:2531;1.44e-15;51!DOID:0060083;1.44e-15;51!DOID:1240;2.71e-13;39!DOID:6193;6.04e-10;1!DOID:8692;2.39e-09;31!DOID:0060058;3.59e-08;10|ontology_enrichment_disease_v019_2=DOID:1036,9.38e-37,8;DOID:2531,1.54e-21,51;DOID:0060083,1.54e-21,51;DOID:1240,5.30e-16,39;DOID:6193,5.79e-10,1;DOID:8692,2.96e-09,31;DOID:0060058,3.55e-08,10|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=|phase1_expression=0,0,0,0,0,0,0,0,0,0,0.697801167972428,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0.0787107813136792,0,0,0,0,0,0,3.25362242437267,0.853015394924529,0,0,0,0,0.223915474239924,0.971680998056939,0.257575567634187,0.290796477559129,0.377875943688809,0.242584061187816,0.464858073811369,0,0.309706370895104,0.28769239232215,0,0.236482229888585,0,0,0,0,0.272906150057846,0.898893937780338,0,0.641858054152187,0.639337125799041,0,0,0,0.580418477257168,0.56738522469114,0.622822248995575,0,0,0.217188844705117,0,0.736555271975129,1.89877432464531,0,0,0,0,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.651083453856419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.654895377488563,0,0,0,0,0,1.90792499444274,1.14398982156026,0.371457501329565,0,0,0,0,0,0.275118041940067,0,0,0,0,0,0,0,0,0,0,0,0,1.53316637465883,0,0.183201743930407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117434498643765,0,0,0,0,0,0,0.247266929278557,0,0,0,0.250237039743928,0,0.438977620880838,0.612975591598039,0.300476117813194,0,0,0,0,0,0,0,0,0.168776332241266,0,0,0.0920498986422993,0,0,0,0,0,0,0,0,0,0,0,0.252320850875628,0.36497735907583,0,0,0,0.464367928031979,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.85609409356116,0,0,0,0,0.100528972411631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0.088048434013226,0,0,0,0,0,0,0,0,0,0,0,0,0.1466765716419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,0.502257091432126,0,0,0,0,0,0,0,11.4326846873398,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0.34444334449382,0.182091168006717,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261435451024901,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.42793898803392,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0.136499911407986,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.349934720244983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0.185803175125719,0.144269212976445,0.284567373393656,1.59426272728822,0,0,0,0.324621940274555,0,0,0,0,0,0,0.201799707191048,0,2.06103206853459,0,0,0,0,0,0,0.270455678475983,0.33307196799782,0,0.561421621224659,0,0.121360521749513,0.222886768554957,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.174919999992391,0,0,0.254253650292766,0.472775363535873,0.344743373241465,0.291604613383254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02193298195737,0.31396051279005,0.332423363800313,2.25595660617181,0.784250137270958,1.00692952185506,2.08729105996604,8.26470210697969,0,0,0,0,0,0,0,0,0,0,0,0,0,0.547364367646998,0,0,0,0,0,0.189559738885464,11.8755501337449,1.34794648816421,0,0,0,0,0,0,0,0,0,0,3.95567874684718,0,0,0,0,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0.135904206073614,0.313808538937,0.203996435272644,0,0,0,0,0,0.262887354279314,0,0,0,0,0,0,0,0,0,0.315132729228895,0.247247575143499,0.202210631562555,0,0.677386656526276,0,0,0,0,0,0,0,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31348033198942,0,0,0,0,0,0,0,0,0,0,0,0,0.9880581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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=W | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C2572 | |||
|description=CAGE_peak_at_chr6:3028692..3028697,+ | |||
|id=chr6:3028692..3028697,+ | |||
|ontology_enrichment_celltype=CL:0000037!7.88e-17!172;CL:0000566!7.88e-17!172;CL:0000988!5.86e-15!182;CL:0002032!1.02e-14!165;CL:0000837!1.02e-14!165;CL:0000763!7.32e-12!112;CL:0000049!7.32e-12!112;CL:0000738!4.28e-11!140;CL:0002087!2.70e-10!119;CL:0002031!2.01e-09!124;CL:0000839!9.31e-08!70;CL:0002194!9.47e-08!63;CL:0000576!9.47e-08!63;CL:0000040!9.47e-08!63;CL:0000559!9.47e-08!63;CL:0002057!1.51e-07!42;CL:0002009!2.51e-07!65;CL:0000557!8.13e-07!71;CL:0000860!9.74e-07!45 | |||
|ontology_enrichment_celltype_v019=CL:0000784;7.35e-12;3!CL:0002127;3.91e-10;1!CL:0000911;3.91e-10;1!CL:0000814;3.91e-10;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000784,6.23e-12,3;CL:0002127,4.09e-10,1;CL:0000914,4.09e-10,1;CL:0000911,4.09e-10,1;CL:0000814,4.09e-10,1;CL:0002042,4.09e-10,1;CL:0002039,4.09e-10,1;CL:0002040,4.09e-10,1;CL:0002041,4.09e-10,1;CL:0000037,8.91e-10,168;CL:0000988,3.87e-09,177;CL:0002032,1.33e-07,161;CL:0000837,1.33e-07,161 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2531!2.97e-16!51;DOID:0060083!2.97e-16!51;DOID:1036!1.07e-13!8;DOID:1240!7.44e-13!39;DOID:0050686!5.62e-08!137;DOID:0060058!9.77e-08!10 | |||
|ontology_enrichment_disease_v019=DOID:1036;5.00e-37;8!DOID:2531;1.44e-15;51!DOID:0060083;1.44e-15;51!DOID:1240;2.71e-13;39!DOID:6193;6.04e-10;1!DOID:8692;2.39e-09;31!DOID:0060058;3.59e-08;10 | |||
|ontology_enrichment_disease_v019_2=DOID:1036,9.38e-37,8;DOID:2531,1.54e-21,51;DOID:0060083,1.54e-21,51;DOID:1240,5.30e-16,39;DOID:6193,5.79e-10,1;DOID:8692,2.96e-09,31;DOID:0060058,3.55e-08,10 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0.697801167972428,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0.0787107813136792,0,0,0,0,0,0,3.25362242437267,0.853015394924529,0,0,0,0,0.223915474239924,0.971680998056939,0.257575567634187,0.290796477559129,0.377875943688809,0.242584061187816,0.464858073811369,0,0.309706370895104,0.28769239232215,0,0.236482229888585,0,0,0,0,0.272906150057846,0.898893937780338,0,0.641858054152187,0.639337125799041,0,0,0,0.580418477257168,0.56738522469114,0.622822248995575,0,0,0.217188844705117,0,0.736555271975129,1.89877432464531,0,0,0,0,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.651083453856419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.654895377488563,0,0,0,0,0,1.90792499444274,1.14398982156026,0.371457501329565,0,0,0,0,0,0.275118041940067,0,0,0,0,0,0,0,0,0,0,0,0,1.53316637465883,0,0.183201743930407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117434498643765,0,0,0,0,0,0,0.247266929278557,0,0,0,0.250237039743928,0,0.438977620880838,0.612975591598039,0.300476117813194,0,0,0,0,0,0,0,0,0.168776332241266,0,0,0.0920498986422993,0,0,0,0,0,0,0,0,0,0,0,0.252320850875628,0.36497735907583,0,0,0,0.464367928031979,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.85609409356116,0,0,0,0,0.100528972411631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0.088048434013226,0,0,0,0,0,0,0,0,0,0,0,0,0.1466765716419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,0.502257091432126,0,0,0,0,0,0,0,11.4326846873398,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0.34444334449382,0.182091168006717,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261435451024901,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.42793898803392,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0.136499911407986,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.349934720244983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0.185803175125719,0.144269212976445,0.284567373393656,1.59426272728822,0,0,0,0.324621940274555,0,0,0,0,0,0,0.201799707191048,0,2.06103206853459,0,0,0,0,0,0,0.270455678475983,0.33307196799782,0,0.561421621224659,0,0.121360521749513,0.222886768554957,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.174919999992391,0,0,0.254253650292766,0.472775363535873,0.344743373241465,0.291604613383254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02193298195737,0.31396051279005,0.332423363800313,2.25595660617181,0.784250137270958,1.00692952185506,2.08729105996604,8.26470210697969,0,0,0,0,0,0,0,0,0,0,0,0,0,0.547364367646998,0,0,0,0,0,0.189559738885464,11.8755501337449,1.34794648816421,0,0,0,0,0,0,0,0,0,0,3.95567874684718,0,0,0,0,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0.135904206073614,0.313808538937,0.203996435272644,0,0,0,0,0,0.262887354279314,0,0,0,0,0,0,0,0,0,0.315132729228895,0.247247575143499,0.202210631562555,0,0.677386656526276,0,0,0,0,0,0,0,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31348033198942,0,0,0,0,0,0,0,0,0,0,0,0,0.988058159489721,1.46151118057075,0,0,0,0,0,0,0,0,0,0,0,0,0.138348634936231,0,0.303298235083296,0,0.235265819698172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192619830407303,0.214441591374926,0,0,0,5.13947079463582,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0.265729680626726,0,0,0,0,0,0,0,0,0,0,0,0.127894371303652,0,0.157265941855896,0.218419276384028,0,0,0.123935764259002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0981477185010256,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0634158101939068,0,0,0,0,0,0,0,0,0,0,0,0,0.0679697329768317,0,0,1.00108261702862,0,0,0,0,0,0,0,0.158013611732727,0,0.173858272302579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11294608203896,0,0.150962843566674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143339583151451,0,0.0679914901909147,0,0,0,0,0,0.126166424835079,0,0.253397002022874,0,0,0,0,2.5006970412019,1.60778478093707,0,0.103432995861895,0,0,0.0645889098360061,0.248298857183432,0,0,0,0.217716747896961,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr6:3028692..3028697,+ | |||
}} |
Revision as of 20:00, 13 September 2013
Short description: | p@chr6:3028692..3028697, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr6:3028692..3028697, + |
Coexpression cluster: | C2572_NK_chronic_embryonic_lymphoma_epithelioid_acute_adult |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
plasmacytoid dendritic cell | 6.23e-12 | 3 |
innate effector T cell | 4.09e-10 | 1 |
immature NK T cell | 4.09e-10 | 1 |
effector T cell | 4.09e-10 | 1 |
mature NK T cell | 4.09e-10 | 1 |
immature NK T cell stage IV | 4.09e-10 | 1 |
immature NK T cell stage I | 4.09e-10 | 1 |
immature NK T cell stage II | 4.09e-10 | 1 |
immature NK T cell stage III | 4.09e-10 | 1 |
hematopoietic stem cell | 8.91e-10 | 168 |
hematopoietic cell | 3.87e-09 | 177 |
hematopoietic oligopotent progenitor cell | 1.33e-07 | 161 |
hematopoietic multipotent progenitor cell | 1.33e-07 | 161 |
Ontology term | p-value | n |
---|---|---|
chronic leukemia | 9.38e-37 | 8 |
hematologic cancer | 1.54e-21 | 51 |
immune system cancer | 1.54e-21 | 51 |
leukemia | 5.30e-16 | 39 |
epithelioid sarcoma | 5.79e-10 | 1 |
myeloid leukemia | 2.96e-09 | 31 |
lymphoma | 3.55e-08 | 10 |
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