FFCP PHASE1:Hg19::chr6:33048134..33048150,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=3115|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=4940|TSSclassifier=S|UniProt=|association_with_transcript=-12bp_to_ENST00000471184,ENST00000488575_5end|description=CAGE_peak_6_at_HLA-DPB1_5end|id=chr6:33048134..33048150,+|ontology_enrichment_celltype=CL:0000055!2.76e-07!180|ontology_enrichment_celltype_v019=CL:0002322;1.30e-09;5!CL:1000507;9.86e-08;10!CL:1000494;9.86e-08;10!CL:0000148;1.39e-07;10!CL:0000669;1.78e-07;4|ontology_enrichment_celltype_v019_2=CL:0002322,1.49e-09,5;CL:1000507,7.82e-08,10;CL:1000494,7.82e-08,10;CL:0000148,9.01e-08,10;CL:0000541,9.01e-08,10;CL:0000669,5.07e-07,4|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!9.52e-16!115;UBERON:0003075!1.08e-12!86;UBERON:0007284!1.08e-12!86;UBERON:0002346!4.79e-12!90;UBERON:0000468!4.91e-12!659;UBERON:0001049!5.66e-11!57;UBERON:0005068!5.66e-11!57;UBERON:0006241!5.66e-11!57;UBERON:0007135!5.66e-11!57;UBERON:0002616!1.28e-10!59;UBERON:0005743!6.56e-10!86;UBERON:0000467!1.25e-09!625;UBERON:0000480!1.75e-09!626;UBERON:0000119!1.89e-09!312;UBERON:0001017!3.75e-09!82;UBERON:0000483!4.80e-09!309;UBERON:0004121!6.38e-09!169;UBERON:0000924!1.17e-08!173;UBERON:0006601!1.17e-08!173;UBERON:0003056!1.18e-08!61;UBERON:0000475!1.25e-08!365;UBERON:0000033!2.01e-08!123;UBERON:0000477!2.07e-08!286;UBERON:0000153!2.15e-08!129;UBERON:0007811!2.15e-08!129;UBERON:0000922!5.47e-08!612;UBERON:0000955!6.72e-08!69;UBERON:0006238!6.72e-08!69;UBERON:0000025!2.40e-07!194;UBERON:0004111!2.59e-07!241;UBERON:0000073!2.84e-07!94;UBERON:0001016!2.84e-07!94;UBERON:0002780!4.61e-07!41;UBERON:0001890!4.61e-07!41;UBERON:0006240!4.61e-07!41;UBERON:0000062!5.66e-07!511|ontology_enrichment_uberon_v019=UBERON:0004733;1.43e-09;12!UBERON:0002028;1.43e-09;12!UBERON:0002298;5.55e-09;6!UBERON:0004732;1.11e-08;13!UBERON:0004211;9.86e-08;10!UBERON:0009773;9.86e-08;10!UBERON:0001231;9.86e-08;10!UBERON:0004810;9.86e-08;10!UBERON:0003891;4.68e-07;4|ontology_enrichment_uberon_v019_2=UBERON:0004733,6.24e-10,12;UBERON:0002028,6.24e-10,12;UBERON:0007277,6.24e-10,12;UBERON:0002298,1.34e-09,6;UBERON:0003076,2.95e-09,15;UBERON:0003057,2.95e-09,15;UBERON:0004732,5.19e-09,13;UBERON:0004810,7.82e-08,10;UBERON:0002346,9.14e-07,86|phase1_expression=0.363356758541113,1.49870366723688,0.563817616383885,0,0,0,0,1.26343974685366,0,0.982935746006035,0.697801167972428,0.436882744260345,0.791300934685361,0.123766352960047,0,0,0.602694528023977,0.730310090387373,0,1.10808952269109,0.204000691244253,0,0.286235987131057,0.547497700291537,0.125542639594803,0,0,0,0,0,0,0,0.6024118375565,0,0,0,0,0,0,0,0,0,0,0.290796477559129,0,0,0,0,0,0.863077176966451,0.512321413058201,0,0,0,0,0.188242339542605,0,0.224723484445085,0,0,0,2.30895910130701,0.398927315243264,0,0,0,0,1.00499466102697,0,0,0.605399502633369,0,0,0,0,0,0,0.300353785683013,0.16072558669708,0,0.19891667719909,0,0,0,0,0.426730222566507,1.60158394814405,0,0,0,0,0,0.764546456250458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34140171940727,1.02290049474824,0.361439152384566,1.00267582127178,0.869079113764942,0.795285947051099,1.45990461090791,0.850813354476611,0.221729397462564,0.43917392846563,0.589405839739707,0,0,0,0,0,0,0,0,0,0.860234595106124,1.04142150482278,0.56530794192401,0,0.550236083880135,0,0,1.06729878806013,0,1.61131726843659,0.760272105718513,0.24406205754817,1.10298924103761,0,0.535798369704479,0.22452937262617,0.450445921933289,0,0,0,0,0,0,0,0.12663051166458,0,0,0,1.68203280042692,0,0,0.933633106199299,0.134710672069688,0.163461903113459,0.605429710579726,1.72852777344,1.40592859100278,0.312160076830321,0,0.298897361103602,0,0.809364721840658,0.280901613404497,0.61246251376468,1.10550885580591,1.23990937410919,0,0.989067717114227,0.910161361938026,0.718618141816238,0.673344455816265,0.375355559615893,0.554128230968366,0.438977620880838,0.919463387397059,0.600952235626387,0,0,0.427114777637135,0.635795703478686,0,0.309157587715317,1.8034837803194,1.11670113798954,0.843881661206331,0.487185025805993,0,0.0920498986422993,0.646584227275248,0.355009592516614,0.705264687593482,1.18692414617341,0,0,0,3.53723747775827,3.04818467139416,2.67246068599892,2.07322110030741,1.26160425437814,1.82488679537915,1.56449532329816,0,1.38134921352481,0,0,0,0,0,0,0,0,0,0,0,2.21446636387394,0,0.8231480226628,4.41026134156626,0,0,0.590789906681404,0,0,0.514703430895577,0,1.1240175325762,0,0.277765335475589,1.3032332212413,1.03993478527958,0,0.811512834825538,0.117408694235822,0.721832238805369,3.24089858803628,2.09279567458058,0,0,0.246217006087397,0,0.148631162288728,0.93733833986777,0,0,0,0.581267877027924,0,0.492663237895943,0.176096868026452,0,0.144119953416961,0.37872730027914,0.253991577168676,1.52795370223311,2.34434894420094,1.71072446022705,0.616964956219941,0.600686115687835,1.14330573052231,0.672786506072164,0.43596006883328,0.366691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005,0.112131862580613,0.891060215894309,0.808468755832877,1.08858373948481,0,0.336760265072938,0.286888821570705,0.665320713092027,0,0,0,0,0,0.855690109280065,0.406896178315738,1.33151354837103,0.402547587182052,0|short_description=p6@HLA-DPB1}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=3115 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4940 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=-12bp_to_ENST00000471184,ENST00000488575_5end | |||
|description=CAGE_peak_6_at_HLA-DPB1_5end | |||
|id=chr6:33048134..33048150,+ | |||
|ontology_enrichment_celltype=CL:0000055!2.76e-07!180 | |||
|ontology_enrichment_celltype_v019=CL:0002322;1.30e-09;5!CL:1000507;9.86e-08;10!CL:1000494;9.86e-08;10!CL:0000148;1.39e-07;10!CL:0000669;1.78e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,1.49e-09,5;CL:1000507,7.82e-08,10;CL:1000494,7.82e-08,10;CL:0000148,9.01e-08,10;CL:0000541,9.01e-08,10;CL:0000669,5.07e-07,4 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!9.52e-16!115;UBERON:0003075!1.08e-12!86;UBERON:0007284!1.08e-12!86;UBERON:0002346!4.79e-12!90;UBERON:0000468!4.91e-12!659;UBERON:0001049!5.66e-11!57;UBERON:0005068!5.66e-11!57;UBERON:0006241!5.66e-11!57;UBERON:0007135!5.66e-11!57;UBERON:0002616!1.28e-10!59;UBERON:0005743!6.56e-10!86;UBERON:0000467!1.25e-09!625;UBERON:0000480!1.75e-09!626;UBERON:0000119!1.89e-09!312;UBERON:0001017!3.75e-09!82;UBERON:0000483!4.80e-09!309;UBERON:0004121!6.38e-09!169;UBERON:0000924!1.17e-08!173;UBERON:0006601!1.17e-08!173;UBERON:0003056!1.18e-08!61;UBERON:0000475!1.25e-08!365;UBERON:0000033!2.01e-08!123;UBERON:0000477!2.07e-08!286;UBERON:0000153!2.15e-08!129;UBERON:0007811!2.15e-08!129;UBERON:0000922!5.47e-08!612;UBERON:0000955!6.72e-08!69;UBERON:0006238!6.72e-08!69;UBERON:0000025!2.40e-07!194;UBERON:0004111!2.59e-07!241;UBERON:0000073!2.84e-07!94;UBERON:0001016!2.84e-07!94;UBERON:0002780!4.61e-07!41;UBERON:0001890!4.61e-07!41;UBERON:0006240!4.61e-07!41;UBERON:0000062!5.66e-07!511 | |||
|ontology_enrichment_uberon_v019=UBERON:0004733;1.43e-09;12!UBERON:0002028;1.43e-09;12!UBERON:0002298;5.55e-09;6!UBERON:0004732;1.11e-08;13!UBERON:0004211;9.86e-08;10!UBERON:0009773;9.86e-08;10!UBERON:0001231;9.86e-08;10!UBERON:0004810;9.86e-08;10!UBERON:0003891;4.68e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004733,6.24e-10,12;UBERON:0002028,6.24e-10,12;UBERON:0007277,6.24e-10,12;UBERON:0002298,1.34e-09,6;UBERON:0003076,2.95e-09,15;UBERON:0003057,2.95e-09,15;UBERON:0004732,5.19e-09,13;UBERON:0004810,7.82e-08,10;UBERON:0002346,9.14e-07,86 | |||
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| |||
|short_description=p6@HLA-DPB1 | |||
}} |
Revision as of 20:29, 13 September 2013
Short description: | p6@HLA-DPB1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_HLA-DPB1_5end |
Coexpression cluster: | NA |
Association with transcript: | -12bp_to_ENST00000471184, ENST00000488575_5end |
EntrezGene: | HLA-DPB1 |
HGNC: | 4940 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 1.49e-09 | 5 |
kidney tubule cell | 7.82e-08 | 10 |
nephron tubule epithelial cell | 7.82e-08 | 10 |
melanocyte | 9.01e-08 | 10 |
melanoblast | 9.01e-08 | 10 |
pericyte cell | 5.07e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
segmental subdivision of hindbrain | 6.24e-10 | 12 |
hindbrain | 6.24e-10 | 12 |
presumptive hindbrain | 6.24e-10 | 12 |
brainstem | 1.34e-09 | 6 |
posterior neural tube | 2.95e-09 | 15 |
chordal neural plate | 2.95e-09 | 15 |
segmental subdivision of nervous system | 5.19e-09 | 13 |
nephron tubule epithelium | 7.82e-08 | 10 |
neurectoderm | 9.14e-07 | 86 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.