FFCP PHASE1:Mm9::chr1:60154737..60154768,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=57750|HGNC=|MCL_coexpression_id=101|UniProt=Q9JJA4,Q4V9X1|association_with_transcript=0bp_to_ENSMUST00000027173,NM_021312,uc007bee.2_5end|description=CAGE_peak_2_at_Wdr12_5end|id=chr1:60154737..60154768,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005057!7.54e-10!51;UBERON:0002370!5.53e-09!23;UBERON:0000974!5.53e-09!23;UBERON:0004807!5.53e-09!23;UBERON:0005058!5.53e-09!23;UBERON:0003351!5.53e-09!23;UBERON:0009113!5.53e-09!23;UBERON:0003295!5.53e-09!23;UBERON:0009722!5.53e-09!23;UBERON:0005562!5.53e-09!23;UBERON:0007690!5.53e-09!23;UBERON:0004177!7.08e-09!29;UBERON:0006562!3.65e-08!24;UBERON:0001557!3.65e-08!24;UBERON:0001042!3.65e-08!24;UBERON:0008814!3.65e-08!24;UBERON:0009145!3.65e-08!24;UBERON:0003408!5.58e-08!24;UBERON:0000153!8.64e-08!94;UBERON:0000949!3.64e-07!72;UBERON:0007811!9.42e-07!86|ontology_enrichment_uberon_v019_2=UBERON:0002370,4.82e-09,23;UBERON:0000974,4.82e-09,23;UBERON:0004807,4.82e-09,23;UBERON:0005058,4.82e-09,23;UBERON:0003351,4.82e-09,23;UBERON:0009113,4.82e-09,23;UBERON:0003295,4.82e-09,23;UBERON:0009722,4.82e-09,23;UBERON:0005562,4.82e-09,23;UBERON:0007690,4.82e-09,23;UBERON:0004177,6.26e-09,29;UBERON:0005057,6.26e-09,29;UBERON:0006562,3.21e-08,24;UBERON:0001557,3.21e-08,24;UBERON:0001042,3.21e-08,24;UBERON:0008814,3.21e-08,24;UBERON:0009145,3.21e-08,24;UBERON:0003408,4.92e-08,24;UBERON:0000153,2.16e-07,43;UBERON:0000949,3.38e-07,72|phase1_expression=4.64431656603902,0.348975407639361,0.454999239389536,0.30246421130683,0,2.35030980676646,4.20502753071946,5.81054955487093,19.851209823385,20.8317428426574,35.7845553591305,38.9288135897242,13.1824562047028,8.21751782738576,7.99463428357591,8.70643649776252,4.19737126876888,5.8360500591274,7.54129384831563,7.21462408056651,6.20816018102809,16.5815888505478,17.2391860831697,3.19984845586813,2.52350209173887,2.29692785646008,1.7230479846363,2.15471232685889,1.71021077510736,2.77233142735924,2.43903561720835,6.35030673459631,9.84103660135312,0,10.9763615505484,12.1351291111699,12.8626694445293,0.837063261473815,1.5626706890476,1.57057123192139,0.588231488031014,0,0.485510353031154,8.18329316841252,6.79225439170748,5.87349606917381,0.782391344348039,0.65407546914134,2.41654801007919,0.972149495371417,0.699932108126813,0,5.20126078778983,7.97898356212479,6.04968838456435,2.31533492432352,2.86533439938757,2.57836046138721,3.03474691289397,2.64495489636016,3.80298842103708,2.03306719241479,0,1.3498495759221,0,0.7104801149461,0,1.53687322128622,6.22137673850866,3.37514845829227,6.52007380189284,2.57085885963423,3.09215957332259,4.65465037016825,3.35459148563827,3.67687514644008,5.50579404996943,7.2781782708557,5.9906547969935,2.37395317914349,3.20206752608434,6.77187381723788,5.58365998002762,11.8180148106653,9.32069311438542,3.24091444021034,6.69146899755784,6.33758115806022,14.6151553133045,5.7434385681157,3.47837386442013,2.58127163094416,6.11974200336975,4.85732872474035,9.09686984426737,7.6164570806547,5.47733238513832,9.71452838694929,6.75443611967459,2.47337702157238,4.50698943285378,1.28326477414318,0,0,4.32982082022428,3.04031838570118,3.0331466700887,5.48082622651488,7.50919862576798,5.64080128446334,9.71517829890361,3.95805121805784,5.30415643688935,5.27529241934179,2.93971767839262,3.64433114856059,1.23597483867187,3.90418263683761,6.19227386364912,3.39710384889559,4.85851340612866,5.33362778448744,5.59175283654366,7.90508151931177,8.16842156572475,2.04365644166873,6.58983184782562,5.39912457894067,9.40319680340679,12.1330417917906,5.49000723382352,7.16229807043327,9.38651329038293,9.46147192122223,9.55825004973976,9.08551073179443,3.86989582631202,4.97627882440372,2.52722758433675,3.57751155007006,10.1493945510909,10.8053989083732,7.20248519221397,11.1521565198429,4.89862793889561,7.30248205623644,5.99691037182265,4.13925393182425,8.40715172438085,7.94245536704841,6.51019159406611,5.91828477554452,10.0097009721215,5.57203466435466,8.23128545631774,9.35461054046918,6.31991868581911,6.69104558498259,7.38825098428541,5.17814431338755,8.20841209933837,7.02242039697958,5.91861838963026,4.9191057936851,6.17068451549513,6.74348439776183,5.90201483079162,4.08678698285093,3.78487654801005,5.74586124276833,3.40489000092594,3.94739966048397,3.95190207523891,3.75777972529041,9.04246778825747,8.54108282748061,1.32167513193519,5.02456076660734,8.53153002140936,8.82499353069666,9.40732467651281,7.05892336181699,7.56085349072559,4.75564065281398,3.32170343081158,4.11747386810027,3.51869292320377,2.98434708061726,3.31438948102504,2.69645822596266,3.02593269824572,2.19055400579804,7.2073802362171,8.79713547094912,9.01661885384643,8.34970444165788,7.37019451236978,4.48869247298039,3.92066530170395,6.4948465111025,6.12295038581362,3.57851775373222,12.1545577105731,11.5123122944105,15.1350426237166,8.31989815823959,8.52012509831712,11.8176808278684,11.2035374783825,5.4662266115654,6.16113861745134,9.33508804839477,1.43768206527355,5.58211421502755,6.86482880852033,8.33510297225469,6.81710171383266,6.27176577772377,3.8798169934987,8.90609635321278,5.86673915191293,8.99648954608497,6.33663670378956,5.52770649557992,4.04674189506223,1.75620283072019,3.31033802623001,1.99318220683897,5.74037167166954,3.60499292374624,3.28101465545202,3.61622646453779,4.52373851817817,1.08781136763742,4.42587845717133,6.34654516500885,10.1146871692309,9.96299336033727,10.6557714494839,7.57412781613119,8.83423014365519,8.98009111882268,4.52389135238878,6.4521575447189,6.46116154838943,3.67999490025482,8.09621403349789,4.9683495844923,7.90575555893047,6.42642632843614,5.96148357874728,4.62970569534864,4.56083486190013,6.76377504187395,5.30980553359851,9.46844481004428,7.86041248108353,6.60117779145643,4.13422650033082,7.68587869859819,5.16856586336442,7.27067458955011,6.41695281092498,10.7452497698177,8.4334886859999,6.18813259489121,5.10659408630682,7.56256594931503,3.75140182969988,6.00143698088458,4.96552654198366,4.99432689285798,4.11372551505302,1.522324745573,5.16277757740163,3.60114520468494,1.7642271844397,2.63818004706368,3.87514624070173,5.00597276903694,4.8942661041286,8.042904087508,2.91480836629851,8.52956389248344,5.98048082792484,6.81076664278634,8.14855920426731,6.40452753815949,6.69801715833023,7.32090154260872,3.39956859987711,3.49878630809145,3.73139929271944,1.90934123603023,7.43389584915668,7.72613975082025,7.66837919834789,8.15444354456428,4.80397640241591,4.18079473792944,3.63675205191478,3.14107130380836,2.20345454596048,1.86401793926078,0,7.47582730219894,8.76929999422617,7.38914515707381,6.58715099736429,7.43406952159424,2.8165737274981,5.33837977860195,2.9360616439199,2.65742532908607,1.44015003128933,14.8525226695244,11.5553372715394,10.681939545142,14.9408946424464,12.7108953923912,15.4971456729387,11.7791540529569,12.7012993370136,14.0343365427925,12.65032990473,13.3090564380629,13.1568138998666,17.3181314952593,19.1678119577773,3.17422537061296,9.98936790183291,12.1113706422792,7.89057696911169,2.70465431645067,3.19060208267009,5.86085197655248,4.71610433973945,2.50786052017682,8.471277639256,6.90487854760765,8.02053718815155,7.38968684077857,8.22099023724771,11.3309084608455,8.10027000278167,9.45674526770863,9.5159905886683,9.83744592328458,12.0393323197645,11.1726964552289,10.0732827394939,8.265628380322,6.49800804146745,5.33146174505041,6.00066165064361,4.12070114477788,2.88827288632634,5.81203587056734,4.81610669791456,7.1678009726709,5.24392441831341,6.33849008808206,5.68611142660571,5.71552429539688,6.72129090480162,5.78727661391115,5.76920261124629,8.39033844766065,5.14303878578123,7.45398385869217,6.43777712857767,7.26732083161643,6.30532848782715,7.61531471025089,8.41468675214754,6.57674278594607,5.56796866768033,3.36685362994643,5.81311588808453,6.10727790728493,6.95692773388472,4.49316839439301,6.36591816237767,3.49734809113124,5.84829021113521,3.43793686477277,0.956441660344217,2.8676884485537,5.56482805489012|short_description=p2@Wdr12}} | ||
|EntrezGene=57750 | |||
|HGNC= | |||
|MCL_coexpression_id=101 | |||
|UniProt=Q9JJA4,Q4V9X1 | |||
|association_with_transcript=0bp_to_ENSMUST00000027173,NM_021312,uc007bee.2_5end | |||
|description=CAGE_peak_2_at_Wdr12_5end | |||
|id=chr1:60154737..60154768,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005057!7.54e-10!51;UBERON:0002370!5.53e-09!23;UBERON:0000974!5.53e-09!23;UBERON:0004807!5.53e-09!23;UBERON:0005058!5.53e-09!23;UBERON:0003351!5.53e-09!23;UBERON:0009113!5.53e-09!23;UBERON:0003295!5.53e-09!23;UBERON:0009722!5.53e-09!23;UBERON:0005562!5.53e-09!23;UBERON:0007690!5.53e-09!23;UBERON:0004177!7.08e-09!29;UBERON:0006562!3.65e-08!24;UBERON:0001557!3.65e-08!24;UBERON:0001042!3.65e-08!24;UBERON:0008814!3.65e-08!24;UBERON:0009145!3.65e-08!24;UBERON:0003408!5.58e-08!24;UBERON:0000153!8.64e-08!94;UBERON:0000949!3.64e-07!72;UBERON:0007811!9.42e-07!86 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,4.82e-09,23;UBERON:0000974,4.82e-09,23;UBERON:0004807,4.82e-09,23;UBERON:0005058,4.82e-09,23;UBERON:0003351,4.82e-09,23;UBERON:0009113,4.82e-09,23;UBERON:0003295,4.82e-09,23;UBERON:0009722,4.82e-09,23;UBERON:0005562,4.82e-09,23;UBERON:0007690,4.82e-09,23;UBERON:0004177,6.26e-09,29;UBERON:0005057,6.26e-09,29;UBERON:0006562,3.21e-08,24;UBERON:0001557,3.21e-08,24;UBERON:0001042,3.21e-08,24;UBERON:0008814,3.21e-08,24;UBERON:0009145,3.21e-08,24;UBERON:0003408,4.92e-08,24;UBERON:0000153,2.16e-07,43;UBERON:0000949,3.38e-07,72 | |||
|phase1_expression=4.64431656603902,0.348975407639361,0.454999239389536,0.30246421130683,0,2.35030980676646,4.20502753071946,5.81054955487093,19.851209823385,20.8317428426574,35.7845553591305,38.9288135897242,13.1824562047028,8.21751782738576,7.99463428357591,8.70643649776252,4.19737126876888,5.8360500591274,7.54129384831563,7.21462408056651,6.20816018102809,16.5815888505478,17.2391860831697,3.19984845586813,2.52350209173887,2.29692785646008,1.7230479846363,2.15471232685889,1.71021077510736,2.77233142735924,2.43903561720835,6.35030673459631,9.84103660135312,0,10.9763615505484,12.1351291111699,12.8626694445293,0.837063261473815,1.5626706890476,1.57057123192139,0.588231488031014,0,0.485510353031154,8.18329316841252,6.79225439170748,5.87349606917381,0.782391344348039,0.65407546914134,2.41654801007919,0.972149495371417,0.699932108126813,0,5.20126078778983,7.97898356212479,6.04968838456435,2.31533492432352,2.86533439938757,2.57836046138721,3.03474691289397,2.64495489636016,3.80298842103708,2.03306719241479,0,1.3498495759221,0,0.7104801149461,0,1.53687322128622,6.22137673850866,3.37514845829227,6.52007380189284,2.57085885963423,3.09215957332259,4.65465037016825,3.35459148563827,3.67687514644008,5.50579404996943,7.2781782708557,5.9906547969935,2.37395317914349,3.20206752608434,6.77187381723788,5.58365998002762,11.8180148106653,9.32069311438542,3.24091444021034,6.69146899755784,6.33758115806022,14.6151553133045,5.7434385681157,3.47837386442013,2.58127163094416,6.11974200336975,4.85732872474035,9.09686984426737,7.6164570806547,5.47733238513832,9.71452838694929,6.75443611967459,2.47337702157238,4.50698943285378,1.28326477414318,0,0,4.32982082022428,3.04031838570118,3.0331466700887,5.48082622651488,7.50919862576798,5.64080128446334,9.71517829890361,3.95805121805784,5.30415643688935,5.27529241934179,2.93971767839262,3.64433114856059,1.23597483867187,3.90418263683761,6.19227386364912,3.39710384889559,4.85851340612866,5.33362778448744,5.59175283654366,7.90508151931177,8.16842156572475,2.04365644166873,6.58983184782562,5.39912457894067,9.40319680340679,12.1330417917906,5.49000723382352,7.16229807043327,9.38651329038293,9.46147192122223,9.55825004973976,9.08551073179443,3.86989582631202,4.97627882440372,2.52722758433675,3.57751155007006,10.1493945510909,10.8053989083732,7.20248519221397,11.1521565198429,4.89862793889561,7.30248205623644,5.99691037182265,4.13925393182425,8.40715172438085,7.94245536704841,6.51019159406611,5.91828477554452,10.0097009721215,5.57203466435466,8.23128545631774,9.35461054046918,6.31991868581911,6.69104558498259,7.38825098428541,5.17814431338755,8.20841209933837,7.02242039697958,5.91861838963026,4.9191057936851,6.17068451549513,6.74348439776183,5.90201483079162,4.08678698285093,3.78487654801005,5.74586124276833,3.40489000092594,3.94739966048397,3.95190207523891,3.75777972529041,9.04246778825747,8.54108282748061,1.32167513193519,5.02456076660734,8.53153002140936,8.82499353069666,9.40732467651281,7.05892336181699,7.56085349072559,4.75564065281398,3.32170343081158,4.11747386810027,3.51869292320377,2.98434708061726,3.31438948102504,2.69645822596266,3.02593269824572,2.19055400579804,7.2073802362171,8.79713547094912,9.01661885384643,8.34970444165788,7.37019451236978,4.48869247298039,3.92066530170395,6.4948465111025,6.12295038581362,3.57851775373222,12.1545577105731,11.5123122944105,15.1350426237166,8.31989815823959,8.52012509831712,11.8176808278684,11.2035374783825,5.4662266115654,6.16113861745134,9.33508804839477,1.43768206527355,5.58211421502755,6.86482880852033,8.33510297225469,6.81710171383266,6.27176577772377,3.8798169934987,8.90609635321278,5.86673915191293,8.99648954608497,6.33663670378956,5.52770649557992,4.04674189506223,1.75620283072019,3.31033802623001,1.99318220683897,5.74037167166954,3.60499292374624,3.28101465545202,3.61622646453779,4.52373851817817,1.08781136763742,4.42587845717133,6.34654516500885,10.1146871692309,9.96299336033727,10.6557714494839,7.57412781613119,8.83423014365519,8.98009111882268,4.52389135238878,6.4521575447189,6.46116154838943,3.67999490025482,8.09621403349789,4.9683495844923,7.90575555893047,6.42642632843614,5.96148357874728,4.62970569534864,4.56083486190013,6.76377504187395,5.30980553359851,9.46844481004428,7.86041248108353,6.60117779145643,4.13422650033082,7.68587869859819,5.16856586336442,7.27067458955011,6.41695281092498,10.7452497698177,8.4334886859999,6.18813259489121,5.10659408630682,7.56256594931503,3.75140182969988,6.00143698088458,4.96552654198366,4.99432689285798,4.11372551505302,1.522324745573,5.16277757740163,3.60114520468494,1.7642271844397,2.63818004706368,3.87514624070173,5.00597276903694,4.8942661041286,8.042904087508,2.91480836629851,8.52956389248344,5.98048082792484,6.81076664278634,8.14855920426731,6.40452753815949,6.69801715833023,7.32090154260872,3.39956859987711,3.49878630809145,3.73139929271944,1.90934123603023,7.43389584915668,7.72613975082025,7.66837919834789,8.15444354456428,4.80397640241591,4.18079473792944,3.63675205191478,3.14107130380836,2.20345454596048,1.86401793926078,0,7.47582730219894,8.76929999422617,7.38914515707381,6.58715099736429,7.43406952159424,2.8165737274981,5.33837977860195,2.9360616439199,2.65742532908607,1.44015003128933,14.8525226695244,11.5553372715394,10.681939545142,14.9408946424464,12.7108953923912,15.4971456729387,11.7791540529569,12.7012993370136,14.0343365427925,12.65032990473,13.3090564380629,13.1568138998666,17.3181314952593,19.1678119577773,3.17422537061296,9.98936790183291,12.1113706422792,7.89057696911169,2.70465431645067,3.19060208267009,5.86085197655248,4.71610433973945,2.50786052017682,8.471277639256,6.90487854760765,8.02053718815155,7.38968684077857,8.22099023724771,11.3309084608455,8.10027000278167,9.45674526770863,9.5159905886683,9.83744592328458,12.0393323197645,11.1726964552289,10.0732827394939,8.265628380322,6.49800804146745,5.33146174505041,6.00066165064361,4.12070114477788,2.88827288632634,5.81203587056734,4.81610669791456,7.1678009726709,5.24392441831341,6.33849008808206,5.68611142660571,5.71552429539688,6.72129090480162,5.78727661391115,5.76920261124629,8.39033844766065,5.14303878578123,7.45398385869217,6.43777712857767,7.26732083161643,6.30532848782715,7.61531471025089,8.41468675214754,6.57674278594607,5.56796866768033,3.36685362994643,5.81311588808453,6.10727790728493,6.95692773388472,4.49316839439301,6.36591816237767,3.49734809113124,5.84829021113521,3.43793686477277,0.956441660344217,2.8676884485537,5.56482805489012 | |||
|short_description=p2@Wdr12 | |||
}} |
Revision as of 20:38, 13 September 2013
Short description: | p2@Wdr12 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Wdr12_5end |
Coexpression cluster: | MCL_coexpression_mm9:101 |
Association with transcript: | 0bp_to_ENSMUST00000027173, NM_021312, uc007bee.2_5end |
EntrezGene: | Wdr12 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
thymus | 4.82e-09 | 23 |
neck | 4.82e-09 | 23 |
respiratory system epithelium | 4.82e-09 | 23 |
hemolymphoid system gland | 4.82e-09 | 23 |
pharyngeal epithelium | 4.82e-09 | 23 |
thymic region | 4.82e-09 | 23 |
pharyngeal gland | 4.82e-09 | 23 |
entire pharyngeal arch endoderm | 4.82e-09 | 23 |
thymus primordium | 4.82e-09 | 23 |
early pharyngeal endoderm | 4.82e-09 | 23 |
hemopoietic organ | 6.26e-09 | 29 |
immune organ | 6.26e-09 | 29 |
pharynx | 3.21e-08 | 24 |
upper respiratory tract | 3.21e-08 | 24 |
chordate pharynx | 3.21e-08 | 24 |
pharyngeal arch system | 3.21e-08 | 24 |
pharyngeal region of foregut | 3.21e-08 | 24 |
gland of gut | 4.92e-08 | 24 |
anterior region of body | 2.16e-07 | 43 |
endocrine system | 3.38e-07 | 72 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.