FFCP PHASE1:Mm9::chr2:11093956..11093977,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=18761|HGNC=|MCL_coexpression_id=21|UniProt=Q8CAV6|association_with_transcript=19bp_to_ENSMUST00000102970_5end|description=CAGE_peak_8_at_Prkcq_5end|id=chr2:11093956..11093977,+|ontology_enrichment_celltype=CL:0000791!3.99e-08!9;CL:0000789!3.99e-08!9;CL:0002420!3.99e-08!9;CL:0002419!3.99e-08!9;CL:0000790!3.99e-08!9;CL:0000624!2.25e-07!8|ontology_enrichment_celltype_v019_2=CL:0000791,3.31e-22,9;CL:0000789,3.31e-22,9;CL:0002420,3.31e-22,9;CL:0002419,3.31e-22,9;CL:0000790,3.31e-22,9;CL:0000624,7.52e-20,8;CL:0000084,8.13e-18,11;CL:0000827,8.13e-18,11;CL:0000838,3.60e-16,12;CL:0000893,4.57e-15,6;CL:0002489,4.57e-15,6;CL:0000898,4.57e-15,6;CL:0000809,4.57e-15,6;CL:0000810,4.57e-15,6;CL:0000895,4.57e-15,6;CL:0000808,4.57e-15,6;CL:0000894,4.57e-15,6;CL:0000806,4.57e-15,6;CL:0000807,4.57e-15,6;CL:0000805,4.57e-15,6;CL:0002425,4.57e-15,6;CL:0002436,4.57e-15,6;CL:0002427,4.57e-15,6;CL:0002428,4.57e-15,6;CL:0002429,4.57e-15,6;CL:0002433,4.57e-15,6;CL:0002431,4.57e-15,6;CL:0002432,4.57e-15,6;CL:0000542,8.90e-15,13;CL:0000051,8.90e-15,13;CL:0002031,8.43e-12,25;CL:0000738,7.54e-11,17;CL:0002087,7.54e-11,17;CL:0000988,1.26e-08,32;CL:0002032,1.26e-08,32;CL:0000037,1.26e-08,32;CL:0000837,1.26e-08,32;CL:0002320,2.23e-07,46;CL:0000134,2.23e-07,46;CL:0000219,9.26e-07,54|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0006562!1.38e-08!24;UBERON:0001557!1.38e-08!24;UBERON:0001042!1.38e-08!24;UBERON:0008814!1.38e-08!24;UBERON:0009145!1.38e-08!24;UBERON:0003408!2.80e-08!24;UBERON:0002370!5.81e-08!23;UBERON:0000974!5.81e-08!23;UBERON:0004807!5.81e-08!23;UBERON:0005058!5.81e-08!23;UBERON:0003351!5.81e-08!23;UBERON:0009113!5.81e-08!23;UBERON:0003295!5.81e-08!23;UBERON:0009722!5.81e-08!23;UBERON:0005562!5.81e-08!23;UBERON:0007690!5.81e-08!23;UBERON:0001004!3.06e-07!42;UBERON:0000065!6.01e-07!41;UBERON:0004177!7.37e-07!29|ontology_enrichment_uberon_v019_2=UBERON:0006562,7.88e-17,24;UBERON:0001557,7.88e-17,24;UBERON:0001042,7.88e-17,24;UBERON:0008814,7.88e-17,24;UBERON:0009145,7.88e-17,24;UBERON:0002370,4.37e-15,23;UBERON:0000974,4.37e-15,23;UBERON:0004807,4.37e-15,23;UBERON:0005058,4.37e-15,23;UBERON:0003351,4.37e-15,23;UBERON:0009113,4.37e-15,23;UBERON:0003295,4.37e-15,23;UBERON:0009722,4.37e-15,23;UBERON:0005562,4.37e-15,23;UBERON:0007690,4.37e-15,23;UBERON:0000072,1.38e-14,27;UBERON:0003408,2.49e-14,24;UBERON:0007811,1.59e-13,36;UBERON:0004177,3.66e-13,29;UBERON:0005057,3.66e-13,29;UBERON:0000077,4.82e-12,35;UBERON:0002193,8.02e-12,48;UBERON:0002405,8.02e-12,48;UBERON:0002390,3.29e-11,45;UBERON:0003061,3.29e-11,45;UBERON:0000153,1.06e-10,43;UBERON:0000065,1.72e-08,41;UBERON:0001004,3.26e-08,42;UBERON:0002368,1.87e-07,60;UBERON:0003929,1.88e-07,55;UBERON:0002384,2.23e-07,46;UBERON:0001948,4.22e-07,5;UBERON:0002315,4.22e-07,5|phase1_expression=0.320297694209588,0,0,0,0,0,0,11.6210991097419,2.81577444303333,3.27690336850791,1.71217968225505,1.51567102091139,16.0928686135333,14.9488888136486,0.666219523631325,0.607425802169478,0.699561878128147,1.26184866143295,1.23402990245165,1.27316895539409,0.340173160604279,0,0,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219686182734472,0.194429899074283,0.139986421625363,0,0,15.2326049822382,10.4189077734164,0,0.286533439938757,0,0,0.528990979272033,0,0,0,0,0,0,0,0.384218305321555,0.103689612308478,0,0,1.14260393761521,1.10434270475807,0,0,0,0,0.638436690425939,0.307213066512487,0.131886287730194,0.0914876436024097,0,0.558365998002762,0,0.30559649555362,0.883885756421003,1.42371680799103,1.3047961207771,0.151452386666368,1.13357340160178,1.44932244350839,1.72084775396277,0,0,0,0,0.561777680527007,0,0,0,1.26759077799012,0,0,0,0,0,0,0.79928715803342,5.43769555659061,0.148442139064825,0,0,0.230615497256059,0,0,0.251333182659351,0.247194967734374,0.433798070759735,0,1.29413479957927,0.883366073841574,0.969750506270444,0,0.292780797011547,0.41889341362691,0,0.599075622529601,0,0.127070227073065,0.449371918214468,0.457500602818626,0.125654352112864,0,0.255715457330331,1.0389402227978,0.973447578406546,0,0.746441823660558,0,0.420883711772948,0.260240885925407,0.459804208866946,0.720248519221397,0.150704817835715,0.0680364991513279,0.384341160854549,0.468508622798644,1.81092359517311,0,0.189106080167819,0,0,0,0,0.205782136407943,0,0,0,0,0.207125772535502,0,0,0,0.196764231747404,0,0,0,0.116765342367169,0,0.164167464079095,0.324275238183423,0.146199987425332,0,0.268412837520744,0.210289948564127,0,0.330418782983798,0.264450566663544,0,0.232236671860439,0,0.201683524623343,0,0,0,0.164698954724011,0.502670417600539,0.397912944082302,0,0,0,0,0.189667900953082,0.228497025219458,0,0.407302655690628,0.387904974335251,0.280543279561274,0.885311519739602,0.295220295959204,1.41298855057237,0.493588655687202,0.592905254174298,0.333690211432188,0.393117990226406,0,0.202860121388503,0,1.01850340712568,0.287696137450811,0.162135226775035,0.549122826376163,0,0,0.624075346229121,0.252578877947112,0.179397413521912,0.482443521363367,0.923765950833023,0,0.488894929326078,0,0,0,0.238043640886014,0.390267295715598,0.630540576424764,0.221464689648775,0.797273843287435,0.81931657357869,0.518054945597687,0.867894351489069,0,0,0,0.275936746304732,0.80275294993896,1.28932855251423,0,2.7771801992481,0.94652465824877,0,0.215423397732799,0,0,0,0,0.292255857911312,0,0,0,0.35613120733451,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0.316036757935816,0,1.03135543248187,1.02131881726136,0.18006109403131,0,0,0,0,0.164549020602121,0,0,0,0,0.65954501176592,0,0.301564624640779,0.119372344003136,0.820704498725306,0,0.741701208042039,1.19609616558497,0,0,0,0.820165366326151,0.228778173206523,0.509935289981566,0,0.138199973804424,0.954670618015114,0.158167996790568,0,0,0,0,0.269728692769641,0,0.26175594198403,0,0.621339313086926,0,0,0,0.194451188344048,0.258319646955462,0,0,0,0.209718688851422,0,0,1.89606672376907,0.810900861160657,1.1298205288131,0.389762468933385,0.358053391334963,0.198681354781265,0.480781798079875,1.03382669022204,0.302899349844443,1.37172251979,0.604957110821043,2.53390489923356,1.53938946624527,2.68816875017609,1.81384306892169,0,0,0,0.386379188064381,0.375364950902364,0,0.214368379079066,0,0.564751842617067,0,0,0.68741272937475,0,0,1.35004500046361,0,0,0.51776031175182,0,0,0,0,0,0,0.666740183404846,0,0.320919209591815,0.758091635291392,0,0.188626341386076,0.280924522409647,0.448176066834085,0.287177344778066,0.952587382566147,0.231768651889711,0.578727661391115,0,0.588795680537589,0.685738504770831,0.354951612318675,0.238436189947321,0.581385666529314,0.470546902076653,0.25384382367503,0.365855945745545,0.526139422875686,0.407412341537585,0,0.474540072496697,0.591026894253381,0.409231043169689,0.309873682371932,0.192906610981141,0,0.701794825336225,0.644613162144895,0.956441660344217,0.661774257358546,0.927471342481686|short_description=p8@Prkcq}} | ||
|EntrezGene=18761 | |||
|HGNC= | |||
|MCL_coexpression_id=21 | |||
|UniProt=Q8CAV6 | |||
|association_with_transcript=19bp_to_ENSMUST00000102970_5end | |||
|description=CAGE_peak_8_at_Prkcq_5end | |||
|id=chr2:11093956..11093977,+ | |||
|ontology_enrichment_celltype=CL:0000791!3.99e-08!9;CL:0000789!3.99e-08!9;CL:0002420!3.99e-08!9;CL:0002419!3.99e-08!9;CL:0000790!3.99e-08!9;CL:0000624!2.25e-07!8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,3.31e-22,9;CL:0000789,3.31e-22,9;CL:0002420,3.31e-22,9;CL:0002419,3.31e-22,9;CL:0000790,3.31e-22,9;CL:0000624,7.52e-20,8;CL:0000084,8.13e-18,11;CL:0000827,8.13e-18,11;CL:0000838,3.60e-16,12;CL:0000893,4.57e-15,6;CL:0002489,4.57e-15,6;CL:0000898,4.57e-15,6;CL:0000809,4.57e-15,6;CL:0000810,4.57e-15,6;CL:0000895,4.57e-15,6;CL:0000808,4.57e-15,6;CL:0000894,4.57e-15,6;CL:0000806,4.57e-15,6;CL:0000807,4.57e-15,6;CL:0000805,4.57e-15,6;CL:0002425,4.57e-15,6;CL:0002436,4.57e-15,6;CL:0002427,4.57e-15,6;CL:0002428,4.57e-15,6;CL:0002429,4.57e-15,6;CL:0002433,4.57e-15,6;CL:0002431,4.57e-15,6;CL:0002432,4.57e-15,6;CL:0000542,8.90e-15,13;CL:0000051,8.90e-15,13;CL:0002031,8.43e-12,25;CL:0000738,7.54e-11,17;CL:0002087,7.54e-11,17;CL:0000988,1.26e-08,32;CL:0002032,1.26e-08,32;CL:0000037,1.26e-08,32;CL:0000837,1.26e-08,32;CL:0002320,2.23e-07,46;CL:0000134,2.23e-07,46;CL:0000219,9.26e-07,54 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0006562!1.38e-08!24;UBERON:0001557!1.38e-08!24;UBERON:0001042!1.38e-08!24;UBERON:0008814!1.38e-08!24;UBERON:0009145!1.38e-08!24;UBERON:0003408!2.80e-08!24;UBERON:0002370!5.81e-08!23;UBERON:0000974!5.81e-08!23;UBERON:0004807!5.81e-08!23;UBERON:0005058!5.81e-08!23;UBERON:0003351!5.81e-08!23;UBERON:0009113!5.81e-08!23;UBERON:0003295!5.81e-08!23;UBERON:0009722!5.81e-08!23;UBERON:0005562!5.81e-08!23;UBERON:0007690!5.81e-08!23;UBERON:0001004!3.06e-07!42;UBERON:0000065!6.01e-07!41;UBERON:0004177!7.37e-07!29 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006562,7.88e-17,24;UBERON:0001557,7.88e-17,24;UBERON:0001042,7.88e-17,24;UBERON:0008814,7.88e-17,24;UBERON:0009145,7.88e-17,24;UBERON:0002370,4.37e-15,23;UBERON:0000974,4.37e-15,23;UBERON:0004807,4.37e-15,23;UBERON:0005058,4.37e-15,23;UBERON:0003351,4.37e-15,23;UBERON:0009113,4.37e-15,23;UBERON:0003295,4.37e-15,23;UBERON:0009722,4.37e-15,23;UBERON:0005562,4.37e-15,23;UBERON:0007690,4.37e-15,23;UBERON:0000072,1.38e-14,27;UBERON:0003408,2.49e-14,24;UBERON:0007811,1.59e-13,36;UBERON:0004177,3.66e-13,29;UBERON:0005057,3.66e-13,29;UBERON:0000077,4.82e-12,35;UBERON:0002193,8.02e-12,48;UBERON:0002405,8.02e-12,48;UBERON:0002390,3.29e-11,45;UBERON:0003061,3.29e-11,45;UBERON:0000153,1.06e-10,43;UBERON:0000065,1.72e-08,41;UBERON:0001004,3.26e-08,42;UBERON:0002368,1.87e-07,60;UBERON:0003929,1.88e-07,55;UBERON:0002384,2.23e-07,46;UBERON:0001948,4.22e-07,5;UBERON:0002315,4.22e-07,5 | |||
|phase1_expression=0.320297694209588,0,0,0,0,0,0,11.6210991097419,2.81577444303333,3.27690336850791,1.71217968225505,1.51567102091139,16.0928686135333,14.9488888136486,0.666219523631325,0.607425802169478,0.699561878128147,1.26184866143295,1.23402990245165,1.27316895539409,0.340173160604279,0,0,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219686182734472,0.194429899074283,0.139986421625363,0,0,15.2326049822382,10.4189077734164,0,0.286533439938757,0,0,0.528990979272033,0,0,0,0,0,0,0,0.384218305321555,0.103689612308478,0,0,1.14260393761521,1.10434270475807,0,0,0,0,0.638436690425939,0.307213066512487,0.131886287730194,0.0914876436024097,0,0.558365998002762,0,0.30559649555362,0.883885756421003,1.42371680799103,1.3047961207771,0.151452386666368,1.13357340160178,1.44932244350839,1.72084775396277,0,0,0,0,0.561777680527007,0,0,0,1.26759077799012,0,0,0,0,0,0,0.79928715803342,5.43769555659061,0.148442139064825,0,0,0.230615497256059,0,0,0.251333182659351,0.247194967734374,0.433798070759735,0,1.29413479957927,0.883366073841574,0.969750506270444,0,0.292780797011547,0.41889341362691,0,0.599075622529601,0,0.127070227073065,0.449371918214468,0.457500602818626,0.125654352112864,0,0.255715457330331,1.0389402227978,0.973447578406546,0,0.746441823660558,0,0.420883711772948,0.260240885925407,0.459804208866946,0.720248519221397,0.150704817835715,0.0680364991513279,0.384341160854549,0.468508622798644,1.81092359517311,0,0.189106080167819,0,0,0,0,0.205782136407943,0,0,0,0,0.207125772535502,0,0,0,0.196764231747404,0,0,0,0.116765342367169,0,0.164167464079095,0.324275238183423,0.146199987425332,0,0.268412837520744,0.210289948564127,0,0.330418782983798,0.264450566663544,0,0.232236671860439,0,0.201683524623343,0,0,0,0.164698954724011,0.502670417600539,0.397912944082302,0,0,0,0,0.189667900953082,0.228497025219458,0,0.407302655690628,0.387904974335251,0.280543279561274,0.885311519739602,0.295220295959204,1.41298855057237,0.493588655687202,0.592905254174298,0.333690211432188,0.393117990226406,0,0.202860121388503,0,1.01850340712568,0.287696137450811,0.162135226775035,0.549122826376163,0,0,0.624075346229121,0.252578877947112,0.179397413521912,0.482443521363367,0.923765950833023,0,0.488894929326078,0,0,0,0.238043640886014,0.390267295715598,0.630540576424764,0.221464689648775,0.797273843287435,0.81931657357869,0.518054945597687,0.867894351489069,0,0,0,0.275936746304732,0.80275294993896,1.28932855251423,0,2.7771801992481,0.94652465824877,0,0.215423397732799,0,0,0,0,0.292255857911312,0,0,0,0.35613120733451,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0.316036757935816,0,1.03135543248187,1.02131881726136,0.18006109403131,0,0,0,0,0.164549020602121,0,0,0,0,0.65954501176592,0,0.301564624640779,0.119372344003136,0.820704498725306,0,0.741701208042039,1.19609616558497,0,0,0,0.820165366326151,0.228778173206523,0.509935289981566,0,0.138199973804424,0.954670618015114,0.158167996790568,0,0,0,0,0.269728692769641,0,0.26175594198403,0,0.621339313086926,0,0,0,0.194451188344048,0.258319646955462,0,0,0,0.209718688851422,0,0,1.89606672376907,0.810900861160657,1.1298205288131,0.389762468933385,0.358053391334963,0.198681354781265,0.480781798079875,1.03382669022204,0.302899349844443,1.37172251979,0.604957110821043,2.53390489923356,1.53938946624527,2.68816875017609,1.81384306892169,0,0,0,0.386379188064381,0.375364950902364,0,0.214368379079066,0,0.564751842617067,0,0,0.68741272937475,0,0,1.35004500046361,0,0,0.51776031175182,0,0,0,0,0,0,0.666740183404846,0,0.320919209591815,0.758091635291392,0,0.188626341386076,0.280924522409647,0.448176066834085,0.287177344778066,0.952587382566147,0.231768651889711,0.578727661391115,0,0.588795680537589,0.685738504770831,0.354951612318675,0.238436189947321,0.581385666529314,0.470546902076653,0.25384382367503,0.365855945745545,0.526139422875686,0.407412341537585,0,0.474540072496697,0.591026894253381,0.409231043169689,0.309873682371932,0.192906610981141,0,0.701794825336225,0.644613162144895,0.956441660344217,0.661774257358546,0.927471342481686 | |||
|short_description=p8@Prkcq | |||
}} |
Revision as of 21:36, 13 September 2013
Short description: | p8@Prkcq |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_8_at_Prkcq_5end |
Coexpression cluster: | MCL_coexpression_mm9:21 |
Association with transcript: | 19bp_to_ENSMUST00000102970_5end |
EntrezGene: | Prkcq |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pharynx | 7.88e-17 | 24 |
upper respiratory tract | 7.88e-17 | 24 |
chordate pharynx | 7.88e-17 | 24 |
pharyngeal arch system | 7.88e-17 | 24 |
pharyngeal region of foregut | 7.88e-17 | 24 |
thymus | 4.37e-15 | 23 |
neck | 4.37e-15 | 23 |
respiratory system epithelium | 4.37e-15 | 23 |
hemolymphoid system gland | 4.37e-15 | 23 |
pharyngeal epithelium | 4.37e-15 | 23 |
thymic region | 4.37e-15 | 23 |
pharyngeal gland | 4.37e-15 | 23 |
entire pharyngeal arch endoderm | 4.37e-15 | 23 |
thymus primordium | 4.37e-15 | 23 |
early pharyngeal endoderm | 4.37e-15 | 23 |
segment of respiratory tract | 1.38e-14 | 27 |
gland of gut | 2.49e-14 | 24 |
craniocervical region | 1.59e-13 | 36 |
hemopoietic organ | 3.66e-13 | 29 |
immune organ | 3.66e-13 | 29 |
mixed endoderm/mesoderm-derived structure | 4.82e-12 | 35 |
hemolymphoid system | 8.02e-12 | 48 |
immune system | 8.02e-12 | 48 |
hematopoietic system | 3.29e-11 | 45 |
blood island | 3.29e-11 | 45 |
anterior region of body | 1.06e-10 | 43 |
respiratory tract | 1.72e-08 | 41 |
respiratory system | 3.26e-08 | 42 |
endocrine gland | 1.87e-07 | 60 |
gut epithelium | 1.88e-07 | 55 |
connective tissue | 2.23e-07 | 46 |
regional part of spinal cord | 4.22e-07 | 5 |
gray matter of spinal cord | 4.22e-07 | 5 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.