FFCP PHASE1:Mm9::chr2:25256065..25256077,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=18146|HGNC=|MCL_coexpression_id=442|UniProt=|association_with_transcript=76bp_to_ENSMUST00000132287_5end|description=CAGE_peak_3_at_Npdc1_5end|id=chr2:25256065..25256077,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0000161,5.12e-07,5;UBERON:0007100,8.81e-07,18;UBERON:0000948,8.81e-07,18;UBERON:0005498,8.81e-07,18;UBERON:0004140,8.81e-07,18;UBERON:0009881,8.81e-07,18;UBERON:0004141,8.81e-07,18;UBERON:0003084,8.81e-07,18;UBERON:0007005,8.81e-07,18;UBERON:0004139,8.81e-07,18;UBERON:0004291,8.81e-07,18|phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1330713617802,0.405507724878058,0,0,0,0,0,0,0,0,0,0,0.257259436035947,15.7593391966316,1.03134418455488,0,0,0,0,0,0,0,0,0,0,0,0.135005938331691,0,0.856952953211411,0.441737081903227,0.122490799214954,0,0,0,0,0,0,0.0914876436024097,0,0,0.56276261003168,0,0,0.142371680799103,0.186399445825301,0.151452386666368,0,0,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0.517875767294343,0,0.173485326766136,0,0,0.150722640552623,0,0.251333182659351,0,0.433798070759735,0,1.7794353494215,0,1.93950101254089,0,0.292780797011547,0.209446706813455,0,0,0,0,0.149790639404823,0,0,0,0,0,0,0.203678727700633,1.49288364732112,0,0.210441855886474,0,0,0,0.30140963567143,0.408218994907967,1.0249097622788,0.562210347358373,1.55222022443409,0,0,0,0.219195732427575,0.278047249225598,0.696504333044333,0.411564272815887,0,0,0,0,0,0,0,0,0,0,0,1.3413670069981,0.116765342367169,0,2.79084688934462,3.24275238183423,3.94739966048397,2.19550115291051,4.02619256281115,0,0.205809224758569,0,0,0,0,0,0,0,0,0,0.329397909448022,0,0.198956472041151,0.19496408711912,0,0,0.597423819763102,0,0.114248512609729,0,0,0,0,0,0.147610147979602,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,1.43768206527355,0,0,0,0.179397413521912,0,0.184753190166605,0,0,0,0,0.167506257441816,0,0,0,0.221464689648775,0,0.163863314715738,0.345369963731791,0.289298117163023,0,0,0.491764273019036,0.551873492609465,0,0,0,3.02965112645248,0,0,0,0,0,0,0,0,0,0,0.283880170416537,0,0.325773918707152,1.81467135269789,0,0,0,0,0.295301892880773,0,0.775284879504663,1.09060118843252,1.06949213515416,1.26414703174326,1.05418608574999,0,0,0,0,0,0,0.356737635204141,0.493647061806363,0.304464949114599,0,0,2.20528398054962,4.122156323537,0.807322133479528,0.301564624640779,0.119372344003136,0.328281799490123,0.291480836629851,0,0,0,0,0,0,0,0,0,0,0.954670618015114,0,0,0,0,0.218362563746178,0.134864346384821,0.495920734352016,0.26175594198403,0.388844919875379,1.24267862617385,0,0,0,0,0,0,0.117357238645754,0.651021924219751,0.734015410979976,0.483168241652012,0.864090018773596,0.632022241256357,0,0.616265742988964,0.25984164595559,0.358053391334963,0,0,0,0.100966449948148,0,0,0,0,0,2.0405734525369,0,0,0,1.35232715822533,0.750729901804728,0.549454872801795,0.643105137237198,0.501572104035363,0,0,0,0.171853182343688,0,0,0,0,0,0,0,0,0,0,0.209613162627982,0.551530525350042,0.888986911206461,1.85431551515005,0.962757628775446,1.26348605881899,1.2673964994512,2.07488975524684,0.749132059759059,1.28050304809739,1.20614484806788,0.476293691283074,0.579421629724277,0.964546102318525,0.824171801606613,1.03039244094078,1.37147700954166,0.532427418478012,1.43061713968393,0.872078499793971,1.31753132581463,0.507687647350059,1.64635175585495,0.526139422875686,0.814824683075171,0,0.593175090620871,1.28055827088233,1.22769312950907,1.39443157067369,1.15743966588685,0,0.701794825336225,1.07435527024149,1.3390183244819,1.98532277207564,2.08681052058379|short_description=p3@Npdc1}} | ||
|EntrezGene=18146 | |||
|HGNC= | |||
|MCL_coexpression_id=442 | |||
|UniProt= | |||
|association_with_transcript=76bp_to_ENSMUST00000132287_5end | |||
|description=CAGE_peak_3_at_Npdc1_5end | |||
|id=chr2:25256065..25256077,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000161,5.12e-07,5;UBERON:0007100,8.81e-07,18;UBERON:0000948,8.81e-07,18;UBERON:0005498,8.81e-07,18;UBERON:0004140,8.81e-07,18;UBERON:0009881,8.81e-07,18;UBERON:0004141,8.81e-07,18;UBERON:0003084,8.81e-07,18;UBERON:0007005,8.81e-07,18;UBERON:0004139,8.81e-07,18;UBERON:0004291,8.81e-07,18 | |||
|phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1330713617802,0.405507724878058,0,0,0,0,0,0,0,0,0,0,0.257259436035947,15.7593391966316,1.03134418455488,0,0,0,0,0,0,0,0,0,0,0,0.135005938331691,0,0.856952953211411,0.441737081903227,0.122490799214954,0,0,0,0,0,0,0.0914876436024097,0,0,0.56276261003168,0,0,0.142371680799103,0.186399445825301,0.151452386666368,0,0,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0.517875767294343,0,0.173485326766136,0,0,0.150722640552623,0,0.251333182659351,0,0.433798070759735,0,1.7794353494215,0,1.93950101254089,0,0.292780797011547,0.209446706813455,0,0,0,0,0.149790639404823,0,0,0,0,0,0,0.203678727700633,1.49288364732112,0,0.210441855886474,0,0,0,0.30140963567143,0.408218994907967,1.0249097622788,0.562210347358373,1.55222022443409,0,0,0,0.219195732427575,0.278047249225598,0.696504333044333,0.411564272815887,0,0,0,0,0,0,0,0,0,0,0,1.3413670069981,0.116765342367169,0,2.79084688934462,3.24275238183423,3.94739966048397,2.19550115291051,4.02619256281115,0,0.205809224758569,0,0,0,0,0,0,0,0,0,0.329397909448022,0,0.198956472041151,0.19496408711912,0,0,0.597423819763102,0,0.114248512609729,0,0,0,0,0,0.147610147979602,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,1.43768206527355,0,0,0,0.179397413521912,0,0.184753190166605,0,0,0,0,0.167506257441816,0,0,0,0.221464689648775,0,0.163863314715738,0.345369963731791,0.289298117163023,0,0,0.491764273019036,0.551873492609465,0,0,0,3.02965112645248,0,0,0,0,0,0,0,0,0,0,0.283880170416537,0,0.325773918707152,1.81467135269789,0,0,0,0,0.295301892880773,0,0.775284879504663,1.09060118843252,1.06949213515416,1.26414703174326,1.05418608574999,0,0,0,0,0,0,0.356737635204141,0.493647061806363,0.304464949114599,0,0,2.20528398054962,4.122156323537,0.807322133479528,0.301564624640779,0.119372344003136,0.328281799490123,0.291480836629851,0,0,0,0,0,0,0,0,0,0,0.954670618015114,0,0,0,0,0.218362563746178,0.134864346384821,0.495920734352016,0.26175594198403,0.388844919875379,1.24267862617385,0,0,0,0,0,0,0.117357238645754,0.651021924219751,0.734015410979976,0.483168241652012,0.864090018773596,0.632022241256357,0,0.616265742988964,0.25984164595559,0.358053391334963,0,0,0,0.100966449948148,0,0,0,0,0,2.0405734525369,0,0,0,1.35232715822533,0.750729901804728,0.549454872801795,0.643105137237198,0.501572104035363,0,0,0,0.171853182343688,0,0,0,0,0,0,0,0,0,0,0.209613162627982,0.551530525350042,0.888986911206461,1.85431551515005,0.962757628775446,1.26348605881899,1.2673964994512,2.07488975524684,0.749132059759059,1.28050304809739,1.20614484806788,0.476293691283074,0.579421629724277,0.964546102318525,0.824171801606613,1.03039244094078,1.37147700954166,0.532427418478012,1.43061713968393,0.872078499793971,1.31753132581463,0.507687647350059,1.64635175585495,0.526139422875686,0.814824683075171,0,0.593175090620871,1.28055827088233,1.22769312950907,1.39443157067369,1.15743966588685,0,0.701794825336225,1.07435527024149,1.3390183244819,1.98532277207564,2.08681052058379 | |||
|short_description=p3@Npdc1 | |||
}} |
Revision as of 23:26, 13 September 2013
Short description: | p3@Npdc1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Npdc1_5end |
Coexpression cluster: | MCL_coexpression_mm9:442 |
Association with transcript: | 76bp_to_ENSMUST00000132287_5end |
EntrezGene: | Npdc1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
orifice | 5.12e-07 | 5 |
primary circulatory organ | 8.81e-07 | 18 |
heart | 8.81e-07 | 18 |
primitive heart tube | 8.81e-07 | 18 |
primary heart field | 8.81e-07 | 18 |
anterior lateral plate mesoderm | 8.81e-07 | 18 |
heart tube | 8.81e-07 | 18 |
heart primordium | 8.81e-07 | 18 |
cardiac mesoderm | 8.81e-07 | 18 |
cardiogenic plate | 8.81e-07 | 18 |
heart rudiment | 8.81e-07 | 18 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.