FFCP PHASE1:Hg19::chr7:142498552..142498565,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C419|description=CAGE_peak_at_chr7:142498552..142498565,+|id=chr7:142498552..142498565,+|ontology_enrichment_celltype=CL:0000084!2.69e-20!25;CL:0000827!2.69e-20!25;CL:0000791!3.96e-15!18;CL:0000789!3.96e-15!18;CL:0002420!3.96e-15!18;CL:0002419!3.96e-15!18;CL:0000790!3.96e-15!18;CL:0000838!4.05e-12!52;CL:0000542!7.72e-12!53;CL:0000051!7.72e-12!53;CL:0000624!1.74e-07!6;CL:0000625!6.10e-07!11|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004177!2.23e-16!7;UBERON:0002370!2.58e-11!4;UBERON:0005058!2.58e-11!4;UBERON:0009113!2.58e-11!4;UBERON:0003295!2.58e-11!4;UBERON:0005562!2.58e-11!4;UBERON:0003351!1.11e-07!6;UBERON:0001042!1.18e-07!10;UBERON:0009145!1.18e-07!10;UBERON:0006562!5.81e-07!11;UBERON:0002106!7.81e-07!3;UBERON:0004854!7.81e-07!3;UBERON:0009034!7.81e-07!3;UBERON:0002095!7.81e-07!3;UBERON:0004782!7.81e-07!3;UBERON:0003281!7.81e-07!3;UBERON:0009664!7.81e-07!3;UBERON:0002296!7.81e-07!3;UBERON:0005602!7.81e-07!3;UBERON:0001179!7.81e-07!3;UBERON:0006293!7.81e-07!3|ontology_enrichment_uberon_v019=UBERON:0002370;2.42e-50;2!UBERON:0005058;2.42e-50;2!UBERON:0009113;2.42e-50;2!UBERON:0004177;7.35e-21;5!UBERON:0005057;7.35e-21;5|ontology_enrichment_uberon_v019_2=UBERON:0002370,8.66e-26,4;UBERON:0005058,8.66e-26,4;UBERON:0009113,8.66e-26,4;UBERON:0003295,8.66e-26,4;UBERON:0005562,8.66e-26,4;UBERON:0003351,1.44e-17,6;UBERON:0004177,3.29e-15,7;UBERON:0005057,3.29e-15,7;UBERON:0000974,5.98e-11,10;UBERON:0003408,5.98e-11,10;UBERON:0001042,5.98e-11,10;UBERON:0009145,5.98e-11,10;UBERON:0006562,4.83e-10,11;UBERON:0009722,4.83e-10,11;UBERON:0007690,4.83e-10,11|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.411167888021826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.786021525498329,0.205601498999509,1.33749196312542,0.651844533267181,0,1.94826728407911,0.779873198196215,0,0.443067789167242,0.270803863765016,0.896639238079726,0.910415432919148,1.31550323682941,1.38175008892924,0.869409257205157,0.14828656316206,0.267540828089713,0,0.453237370790265,0,0,0.759059076058509,0,0,0,0.301150238155546,0,0,0.710331756132051,0.821127996921047,0,0,0.289648807765598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441463099414651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112085143993527,0,0.215627574859517,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.79312517629427,0,0,0,0,0,30.1641415797276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,31.6799224406783,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247127877893006,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426905989478705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124980407962107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19998739585493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0.470317296361523,0,0,0,0,0,0,0.281951753939561,0.193373663920732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.84642444261665,3.78655757204733,0,0,0,0,0,0.26940821205835,0,0,0,0,0,0,0,0,0,0,0.402547587182052,0|short_description=p@chr7:142498552..142498565,+}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C419 | |||
|description=CAGE_peak_at_chr7:142498552..142498565,+ | |||
|id=chr7:142498552..142498565,+ | |||
|ontology_enrichment_celltype=CL:0000084!2.69e-20!25;CL:0000827!2.69e-20!25;CL:0000791!3.96e-15!18;CL:0000789!3.96e-15!18;CL:0002420!3.96e-15!18;CL:0002419!3.96e-15!18;CL:0000790!3.96e-15!18;CL:0000838!4.05e-12!52;CL:0000542!7.72e-12!53;CL:0000051!7.72e-12!53;CL:0000624!1.74e-07!6;CL:0000625!6.10e-07!11 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004177!2.23e-16!7;UBERON:0002370!2.58e-11!4;UBERON:0005058!2.58e-11!4;UBERON:0009113!2.58e-11!4;UBERON:0003295!2.58e-11!4;UBERON:0005562!2.58e-11!4;UBERON:0003351!1.11e-07!6;UBERON:0001042!1.18e-07!10;UBERON:0009145!1.18e-07!10;UBERON:0006562!5.81e-07!11;UBERON:0002106!7.81e-07!3;UBERON:0004854!7.81e-07!3;UBERON:0009034!7.81e-07!3;UBERON:0002095!7.81e-07!3;UBERON:0004782!7.81e-07!3;UBERON:0003281!7.81e-07!3;UBERON:0009664!7.81e-07!3;UBERON:0002296!7.81e-07!3;UBERON:0005602!7.81e-07!3;UBERON:0001179!7.81e-07!3;UBERON:0006293!7.81e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0002370;2.42e-50;2!UBERON:0005058;2.42e-50;2!UBERON:0009113;2.42e-50;2!UBERON:0004177;7.35e-21;5!UBERON:0005057;7.35e-21;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,8.66e-26,4;UBERON:0005058,8.66e-26,4;UBERON:0009113,8.66e-26,4;UBERON:0003295,8.66e-26,4;UBERON:0005562,8.66e-26,4;UBERON:0003351,1.44e-17,6;UBERON:0004177,3.29e-15,7;UBERON:0005057,3.29e-15,7;UBERON:0000974,5.98e-11,10;UBERON:0003408,5.98e-11,10;UBERON:0001042,5.98e-11,10;UBERON:0009145,5.98e-11,10;UBERON:0006562,4.83e-10,11;UBERON:0009722,4.83e-10,11;UBERON:0007690,4.83e-10,11 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.411167888021826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.786021525498329,0.205601498999509,1.33749196312542,0.651844533267181,0,1.94826728407911,0.779873198196215,0,0.443067789167242,0.270803863765016,0.896639238079726,0.910415432919148,1.31550323682941,1.38175008892924,0.869409257205157,0.14828656316206,0.267540828089713,0,0.453237370790265,0,0,0.759059076058509,0,0,0,0.301150238155546,0,0,0.710331756132051,0.821127996921047,0,0,0.289648807765598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441463099414651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112085143993527,0,0.215627574859517,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.79312517629427,0,0,0,0,0,30.1641415797276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,31.6799224406783,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247127877893006,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426905989478705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124980407962107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19998739585493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0.470317296361523,0,0,0,0,0,0,0.281951753939561,0.193373663920732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.84642444261665,3.78655757204733,0,0,0,0,0,0.26940821205835,0,0,0,0,0,0,0,0,0,0,0.402547587182052,0 | |||
|short_description=p@chr7:142498552..142498565,+ | |||
}} |
Revision as of 23:41, 13 September 2013
Short description: | p@chr7:142498552..142498565, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr7:142498552..142498565, + |
Coexpression cluster: | C419_acute_chronic_thymus_xeroderma_Burkitt_Hodgkin_CD4 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
thymus | 8.66e-26 | 4 |
hemolymphoid system gland | 8.66e-26 | 4 |
thymic region | 8.66e-26 | 4 |
pharyngeal gland | 8.66e-26 | 4 |
thymus primordium | 8.66e-26 | 4 |
pharyngeal epithelium | 1.44e-17 | 6 |
hemopoietic organ | 3.29e-15 | 7 |
immune organ | 3.29e-15 | 7 |
neck | 5.98e-11 | 10 |
gland of gut | 5.98e-11 | 10 |
chordate pharynx | 5.98e-11 | 10 |
pharyngeal region of foregut | 5.98e-11 | 10 |
pharynx | 4.83e-10 | 11 |
entire pharyngeal arch endoderm | 4.83e-10 | 11 |
early pharyngeal endoderm | 4.83e-10 | 11 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.