FFCP PHASE1:Hg19::chr7:18832759..18832786,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=9734|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=14065|TSSclassifier=S|UniProt=|association_with_transcript=0bp_to_ENST00000490851,uc003suk.2_5end|description=CAGE_peak_16_at_HDAC9_5end|id=chr7:18832759..18832786,+|ontology_enrichment_celltype=CL:0002564!2.02e-08!3;CL:0000197!2.58e-07!6;CL:0000098!2.58e-07!6;CL:0002167!2.58e-07!6;CL:0000667!4.94e-07!6;CL:0000058!4.94e-07!6;CL:0000138!4.94e-07!6;CL:0000499!9.34e-07!27|ontology_enrichment_celltype_v019=CL:0002564;5.78e-24;3!CL:0000197;1.00e-21;6!CL:0000098;1.00e-21;6!CL:0002167;1.00e-21;6!CL:0002602;7.29e-17;2!CL:0000138;2.65e-12;6!CL:0000153;2.29e-08;9!CL:0000447;2.29e-08;9!CL:0000499;9.41e-07;28|ontology_enrichment_celltype_v019_2=CL:0002564,8.55e-24,3;CL:0000197,1.03e-21,6;CL:0000098,1.03e-21,6;CL:0002167,1.03e-21,6;CL:0002602,6.75e-17,2;CL:0000058,2.31e-12,6;CL:0000138,2.31e-12,6;CL:0000153,2.10e-08,9;CL:0000447,2.10e-08,9;CL:0000499,8.34e-07,28|ontology_enrichment_development_v019=UBERON:0006242;7.26e-09;1!UBERON:0010115;7.26e-09;1!UBERON:0003099;7.26e-09;1!UBERON:0003852;7.26e-09;1|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002242!2.02e-08!3;UBERON:0003068!2.02e-08!3;UBERON:0002328!2.02e-08!3;UBERON:0004880!2.02e-08!3;UBERON:0005174!3.67e-08!5;UBERON:0001137!3.67e-08!5;UBERON:0000075!6.32e-08!13;UBERON:0005944!6.32e-08!13;UBERON:0004288!6.32e-08!13;UBERON:0003089!6.32e-08!13|ontology_enrichment_uberon_v019=UBERON:0011135;5.24e-39;5!UBERON:0002216;5.24e-39;5!UBERON:0011134;5.24e-39;5!UBERON:0002209;5.24e-39;5!UBERON:0002213;5.24e-39;5!UBERON:0007844;5.24e-39;5!UBERON:0011138;5.24e-39;5!UBERON:0001130;5.24e-39;5!UBERON:0001066;5.24e-39;5!UBERON:0001468;5.24e-39;5!UBERON:0004905;2.27e-24;8!UBERON:0000982;2.27e-24;8!UBERON:0004770;2.27e-24;8!UBERON:0002242;5.78e-24;3!UBERON:0000075;4.69e-17;16!UBERON:0006444;7.29e-17;2!UBERON:0001995;7.29e-17;2!UBERON:0004715;7.29e-17;2!UBERON:0004765;8.12e-14;26!UBERON:0002418;1.49e-11;3!UBERON:0004755;1.49e-11;3!UBERON:0002363;7.26e-09;1!UBERON:0005705;7.26e-09;1!UBERON:0008193;7.26e-09;1!UBERON:0010912;7.26e-09;1!UBERON:0002514;7.26e-09;1!UBERON:0003457;7.26e-09;1!UBERON:0008907;7.26e-09;1!UBERON:0008001;7.26e-09;1!UBERON:0007213;7.26e-09;1!UBERON:0009891;7.26e-09;1!UBERON:0007914;7.26e-09;1!UBERON:0007375;7.26e-09;1!UBERON:0003323;7.26e-09;1!UBERON:0010258;7.26e-09;1!UBERON:0005253;7.26e-09;1!UBERON:0007842;7.26e-09;1!UBERON:0002397;7.26e-09;1!UBERON:0003113;7.26e-09;1!UBERON:0003277;7.26e-09;1!UBERON:0001709;7.26e-09;1!UBERON:0002244;7.26e-09;1!UBERON:0005620;7.26e-09;1!UBERON:0010364;7.26e-09;1!UBERON:0004288;7.26e-09;1!UBERON:0001434;6.23e-07;36|ontology_enrichment_uberon_v019_2=UBERON:0011135,7.19e-39,5;UBERON:0002216,7.19e-39,5;UBERON:0011134,7.19e-39,5;UBERON:0002209,7.19e-39,5;UBERON:0002213,7.19e-39,5;UBERON:0005856,7.19e-39,5;UBERON:0005866,7.19e-39,5;UBERON:0005863,7.19e-39,5;UBERON:0007844,7.19e-39,5;UBERON:0011138,7.19e-39,5;UBERON:0001130,7.19e-39,5;UBERON:0001066,7.19e-39,5;UBERON:0001468,7.19e-39,5;UBERON:0004905,2.75e-24,8;UBERON:0000982,2.75e-24,8;UBERON:0004770,2.75e-24,8;UBERON:0002242,8.55e-24,3;UBERON:0003068,8.55e-24,3;UBERON:0002328,8.55e-24,3;UBERON:0004880,8.55e-24,3;UBERON:0000075,4.56e-17,16;UBERON:0006444,6.75e-17,2;UBERON:0001995,6.75e-17,2;UBERON:0004715,6.75e-17,2;UBERON:0002418,1.41e-11,3;UBERON:0004755,1.41e-11,3;UBERON:0005705,4.91e-09,1;UBERON:0008193,4.91e-09,1;UBERON:0010912,4.91e-09,1;UBERON:0002514,4.91e-09,1;UBERON:0003457,4.91e-09,1;UBERON:0008907,4.91e-09,1;UBERON:0008001,4.91e-09,1;UBERON:0007213,4.91e-09,1;UBERON:0009891,4.91e-09,1;UBERON:0007914,4.91e-09,1;UBERON:0009292,4.91e-09,1;UBERON:0003099,4.91e-09,1;UBERON:0007375,4.91e-09,1;UBERON:0003323,4.91e-09,1;UBERON:0010258,4.91e-09,1;UBERON:0007842,4.91e-09,1;UBERON:0009494,4.91e-09,1;UBERON:0010042,4.91e-09,1;UBERON:0010045,4.91e-09,1;UBERON:0010259,4.91e-09,1;UBERON:0010359,4.91e-09,1;UBERON:0009526,4.91e-09,1;UBERON:0002397,4.91e-09,1;UBERON:0003113,4.91e-09,1;UBERON:0003277,4.91e-09,1;UBERON:0001709,4.91e-09,1;UBERON:0004066,4.91e-09,1;UBERON:0002244,4.91e-09,1;UBERON:0005620,4.91e-09,1;UBERON:0004362,4.91e-09,1;UBERON:0010364,4.91e-09,1;UBERON:0010046,4.91e-09,1;UBERON:0005868,4.91e-09,1;UBERON:0007238,4.91e-09,1;UBERON:0004288,4.91e-09,1;UBERON:0004068,4.91e-09,1;UBERON:0010334,4.91e-09,1;UBERON:0003852,4.91e-09,1;UBERON:0010253,4.91e-09,1;UBERON:0011137,4.99e-09,14;UBERON:0002363,5.31e-09,1;UBERON:0007645,5.31e-09,1;UBERON:0007647,5.31e-09,1;UBERON:0010115,5.31e-09,1|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,6.93091576576261,3.97676850873499,0,0,0,0,0,0,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.59022220007589,3.50936537445123,1.59331170856906,0,0.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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=9734 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14065 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000490851,uc003suk.2_5end | |||
|description=CAGE_peak_16_at_HDAC9_5end | |||
|id=chr7:18832759..18832786,+ | |||
|ontology_enrichment_celltype=CL:0002564!2.02e-08!3;CL:0000197!2.58e-07!6;CL:0000098!2.58e-07!6;CL:0002167!2.58e-07!6;CL:0000667!4.94e-07!6;CL:0000058!4.94e-07!6;CL:0000138!4.94e-07!6;CL:0000499!9.34e-07!27 | |||
|ontology_enrichment_celltype_v019=CL:0002564;5.78e-24;3!CL:0000197;1.00e-21;6!CL:0000098;1.00e-21;6!CL:0002167;1.00e-21;6!CL:0002602;7.29e-17;2!CL:0000138;2.65e-12;6!CL:0000153;2.29e-08;9!CL:0000447;2.29e-08;9!CL:0000499;9.41e-07;28 | |||
|ontology_enrichment_celltype_v019_2=CL:0002564,8.55e-24,3;CL:0000197,1.03e-21,6;CL:0000098,1.03e-21,6;CL:0002167,1.03e-21,6;CL:0002602,6.75e-17,2;CL:0000058,2.31e-12,6;CL:0000138,2.31e-12,6;CL:0000153,2.10e-08,9;CL:0000447,2.10e-08,9;CL:0000499,8.34e-07,28 | |||
|ontology_enrichment_development_v019=UBERON:0006242;7.26e-09;1!UBERON:0010115;7.26e-09;1!UBERON:0003099;7.26e-09;1!UBERON:0003852;7.26e-09;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002242!2.02e-08!3;UBERON:0003068!2.02e-08!3;UBERON:0002328!2.02e-08!3;UBERON:0004880!2.02e-08!3;UBERON:0005174!3.67e-08!5;UBERON:0001137!3.67e-08!5;UBERON:0000075!6.32e-08!13;UBERON:0005944!6.32e-08!13;UBERON:0004288!6.32e-08!13;UBERON:0003089!6.32e-08!13 | |||
|ontology_enrichment_uberon_v019=UBERON:0011135;5.24e-39;5!UBERON:0002216;5.24e-39;5!UBERON:0011134;5.24e-39;5!UBERON:0002209;5.24e-39;5!UBERON:0002213;5.24e-39;5!UBERON:0007844;5.24e-39;5!UBERON:0011138;5.24e-39;5!UBERON:0001130;5.24e-39;5!UBERON:0001066;5.24e-39;5!UBERON:0001468;5.24e-39;5!UBERON:0004905;2.27e-24;8!UBERON:0000982;2.27e-24;8!UBERON:0004770;2.27e-24;8!UBERON:0002242;5.78e-24;3!UBERON:0000075;4.69e-17;16!UBERON:0006444;7.29e-17;2!UBERON:0001995;7.29e-17;2!UBERON:0004715;7.29e-17;2!UBERON:0004765;8.12e-14;26!UBERON:0002418;1.49e-11;3!UBERON:0004755;1.49e-11;3!UBERON:0002363;7.26e-09;1!UBERON:0005705;7.26e-09;1!UBERON:0008193;7.26e-09;1!UBERON:0010912;7.26e-09;1!UBERON:0002514;7.26e-09;1!UBERON:0003457;7.26e-09;1!UBERON:0008907;7.26e-09;1!UBERON:0008001;7.26e-09;1!UBERON:0007213;7.26e-09;1!UBERON:0009891;7.26e-09;1!UBERON:0007914;7.26e-09;1!UBERON:0007375;7.26e-09;1!UBERON:0003323;7.26e-09;1!UBERON:0010258;7.26e-09;1!UBERON:0005253;7.26e-09;1!UBERON:0007842;7.26e-09;1!UBERON:0002397;7.26e-09;1!UBERON:0003113;7.26e-09;1!UBERON:0003277;7.26e-09;1!UBERON:0001709;7.26e-09;1!UBERON:0002244;7.26e-09;1!UBERON:0005620;7.26e-09;1!UBERON:0010364;7.26e-09;1!UBERON:0004288;7.26e-09;1!UBERON:0001434;6.23e-07;36 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0011135,7.19e-39,5;UBERON:0002216,7.19e-39,5;UBERON:0011134,7.19e-39,5;UBERON:0002209,7.19e-39,5;UBERON:0002213,7.19e-39,5;UBERON:0005856,7.19e-39,5;UBERON:0005866,7.19e-39,5;UBERON:0005863,7.19e-39,5;UBERON:0007844,7.19e-39,5;UBERON:0011138,7.19e-39,5;UBERON:0001130,7.19e-39,5;UBERON:0001066,7.19e-39,5;UBERON:0001468,7.19e-39,5;UBERON:0004905,2.75e-24,8;UBERON:0000982,2.75e-24,8;UBERON:0004770,2.75e-24,8;UBERON:0002242,8.55e-24,3;UBERON:0003068,8.55e-24,3;UBERON:0002328,8.55e-24,3;UBERON:0004880,8.55e-24,3;UBERON:0000075,4.56e-17,16;UBERON:0006444,6.75e-17,2;UBERON:0001995,6.75e-17,2;UBERON:0004715,6.75e-17,2;UBERON:0002418,1.41e-11,3;UBERON:0004755,1.41e-11,3;UBERON:0005705,4.91e-09,1;UBERON:0008193,4.91e-09,1;UBERON:0010912,4.91e-09,1;UBERON:0002514,4.91e-09,1;UBERON:0003457,4.91e-09,1;UBERON:0008907,4.91e-09,1;UBERON:0008001,4.91e-09,1;UBERON:0007213,4.91e-09,1;UBERON:0009891,4.91e-09,1;UBERON:0007914,4.91e-09,1;UBERON:0009292,4.91e-09,1;UBERON:0003099,4.91e-09,1;UBERON:0007375,4.91e-09,1;UBERON:0003323,4.91e-09,1;UBERON:0010258,4.91e-09,1;UBERON:0007842,4.91e-09,1;UBERON:0009494,4.91e-09,1;UBERON:0010042,4.91e-09,1;UBERON:0010045,4.91e-09,1;UBERON:0010259,4.91e-09,1;UBERON:0010359,4.91e-09,1;UBERON:0009526,4.91e-09,1;UBERON:0002397,4.91e-09,1;UBERON:0003113,4.91e-09,1;UBERON:0003277,4.91e-09,1;UBERON:0001709,4.91e-09,1;UBERON:0004066,4.91e-09,1;UBERON:0002244,4.91e-09,1;UBERON:0005620,4.91e-09,1;UBERON:0004362,4.91e-09,1;UBERON:0010364,4.91e-09,1;UBERON:0010046,4.91e-09,1;UBERON:0005868,4.91e-09,1;UBERON:0007238,4.91e-09,1;UBERON:0004288,4.91e-09,1;UBERON:0004068,4.91e-09,1;UBERON:0010334,4.91e-09,1;UBERON:0003852,4.91e-09,1;UBERON:0010253,4.91e-09,1;UBERON:0011137,4.99e-09,14;UBERON:0002363,5.31e-09,1;UBERON:0007645,5.31e-09,1;UBERON:0007647,5.31e-09,1;UBERON:0010115,5.31e-09,1 | |||
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|short_description=p16@HDAC9 | |||
}} |
Revision as of 00:21, 14 September 2013
Short description: | p16@HDAC9 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_16_at_HDAC9_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000490851, uc003suk.2_5end |
EntrezGene: | HDAC9 |
HGNC: | 14065 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
nucleus pulposus cell of intervertebral disc | 8.55e-24 | 3 |
receptor cell | 1.03e-21 | 6 |
sensory epithelial cell | 1.03e-21 | 6 |
olfactory epithelial cell | 1.03e-21 | 6 |
annulus pulposus cell | 6.75e-17 | 2 |
chondroblast | 2.31e-12 | 6 |
chondrocyte | 2.31e-12 | 6 |
GAG secreting cell | 2.10e-08 | 9 |
carbohydrate secreting cell | 2.10e-08 | 9 |
stromal cell | 8.34e-07 | 28 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.