FFCP PHASE1:Hg19::chr7:29900040..29900050,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C430|description=CAGE_peak_at_chr7:29900040..29900050,+|id=chr7:29900040..29900050,+|ontology_enrichment_celltype=CL:0000188!8.05e-10!9;CL:0000594!4.10e-08!3|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:1909;4.52e-50;2|ontology_enrichment_disease_v019_2=DOID:1909,4.52e-50,2|ontology_enrichment_uberon=UBERON:0001049!1.52e-28!57;UBERON:0005068!1.52e-28!57;UBERON:0006241!1.52e-28!57;UBERON:0007135!1.52e-28!57;UBERON:0007023!2.31e-25!115;UBERON:0002616!1.55e-21!59;UBERON:0001017!1.43e-20!82;UBERON:0002308!1.65e-20!9;UBERON:0000125!1.65e-20!9;UBERON:0000955!6.57e-20!69;UBERON:0006238!6.57e-20!69;UBERON:0005743!1.96e-19!86;UBERON:0003075!1.25e-17!86;UBERON:0007284!1.25e-17!86;UBERON:0000073!3.18e-17!94;UBERON:0001016!3.18e-17!94;UBERON:0002346!1.13e-16!90;UBERON:0006331!1.17e-16!3;UBERON:0002298!2.26e-16!8;UBERON:0003076!3.08e-16!15;UBERON:0003057!3.08e-16!15;UBERON:0002020!3.66e-16!34;UBERON:0003528!3.66e-16!34;UBERON:0001893!4.02e-16!34;UBERON:0000988!6.34e-16!3;UBERON:0002780!9.23e-16!41;UBERON:0001890!9.23e-16!41;UBERON:0006240!9.23e-16!41;UBERON:0003080!2.44e-15!42;UBERON:0002791!8.43e-14!33;UBERON:0000153!5.17e-13!129;UBERON:0007811!5.17e-13!129;UBERON:0009663!2.44e-12!7;UBERON:0001869!2.27e-11!32;UBERON:0002148!2.61e-11!2;UBERON:0009662!2.61e-11!2;UBERON:0000033!5.82e-11!123;UBERON:0004733!1.37e-10!12;UBERON:0002028!1.37e-10!12;UBERON:0007277!1.37e-10!12;UBERON:0004121!4.97e-10!169;UBERON:0003056!6.52e-10!61;UBERON:0004732!9.33e-10!13;UBERON:0000924!1.07e-09!173;UBERON:0006601!1.07e-09!173;UBERON:0002420!1.27e-09!9;UBERON:0007245!1.27e-09!9;UBERON:0010009!1.27e-09!9;UBERON:0010011!1.27e-09!9;UBERON:0000454!1.27e-09!9;UBERON:0002680!2.93e-09!9;UBERON:0001895!2.93e-09!9;UBERON:0010092!2.93e-09!9;UBERON:0000200!2.15e-08!6;UBERON:0000483!2.45e-08!309;UBERON:0000119!3.36e-08!312;UBERON:0002240!3.43e-08!3;UBERON:0002771!4.40e-08!3;UBERON:0000475!1.44e-07!365;UBERON:0002038!4.58e-07!1;UBERON:0009661!4.58e-07!1;UBERON:0005418!5.43e-07!1;UBERON:0001389!5.43e-07!1;UBERON:0000026!5.43e-07!1;UBERON:0008784!5.43e-07!1;UBERON:0006058!5.43e-07!1;UBERON:0003663!5.43e-07!1;UBERON:0001383!5.43e-07!1;UBERON:0004256!5.43e-07!1;UBERON:0002529!5.43e-07!1;UBERON:0004708!5.43e-07!1;UBERON:0002101!5.43e-07!1;UBERON:0004709!5.43e-07!1;UBERON:0003661!5.43e-07!1;UBERON:0002471!5.43e-07!1;UBERON:0004357!5.43e-07!1;UBERON:0009872!5.43e-07!1;UBERON:0004347!5.43e-07!1;UBERON:0005420!5.43e-07!1;UBERON:0005732!5.43e-07!1;UBERON:0006057!5.43e-07!1;UBERON:0000978!5.43e-07!1;UBERON:0002103!5.43e-07!1;UBERON:0001665!5.43e-07!1;UBERON:0003823!5.43e-07!1;UBERON:0000154!5.43e-07!1;UBERON:0005733!5.43e-07!1;UBERON:0005730!5.43e-07!1|ontology_enrichment_uberon_v019=UBERON:0001003;5.93e-08;15!UBERON:0007376;5.93e-08;15|ontology_enrichment_uberon_v019_2=UBERON:0001003,5.93e-08,15;UBERON:0007376,5.93e-08,15;UBERON:0007383,5.93e-08,15|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132529768321485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.702012795417713,0.445893486866185,0,0,0,0,0,0,0,0,0,0,0,0.126995788584338,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137836572484531,0,0.145016693914229,0.255679882248303,0.712256285173899,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,18.1788286553751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0.110579259931225,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134802265961354,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.273810757783986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.408610218334727,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.250381861413,0,0.221858103073705,0,0,0,1.97143852804142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0.478901577171454,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679697329768317,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.647428837187895,0.102662806856247,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0.297046400327086,0,0,0,0,0,0,0,0,0,0,0.716697915757256,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.517164979309476,0.426467963801962,0,0.0645889098360061,0,0,0,0.202117188958219,0.217716747896961,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr7:29900040..29900050,+}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C430 | |||
|description=CAGE_peak_at_chr7:29900040..29900050,+ | |||
|id=chr7:29900040..29900050,+ | |||
|ontology_enrichment_celltype=CL:0000188!8.05e-10!9;CL:0000594!4.10e-08!3 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:1909;4.52e-50;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1909,4.52e-50,2 | |||
|ontology_enrichment_uberon=UBERON:0001049!1.52e-28!57;UBERON:0005068!1.52e-28!57;UBERON:0006241!1.52e-28!57;UBERON:0007135!1.52e-28!57;UBERON:0007023!2.31e-25!115;UBERON:0002616!1.55e-21!59;UBERON:0001017!1.43e-20!82;UBERON:0002308!1.65e-20!9;UBERON:0000125!1.65e-20!9;UBERON:0000955!6.57e-20!69;UBERON:0006238!6.57e-20!69;UBERON:0005743!1.96e-19!86;UBERON:0003075!1.25e-17!86;UBERON:0007284!1.25e-17!86;UBERON:0000073!3.18e-17!94;UBERON:0001016!3.18e-17!94;UBERON:0002346!1.13e-16!90;UBERON:0006331!1.17e-16!3;UBERON:0002298!2.26e-16!8;UBERON:0003076!3.08e-16!15;UBERON:0003057!3.08e-16!15;UBERON:0002020!3.66e-16!34;UBERON:0003528!3.66e-16!34;UBERON:0001893!4.02e-16!34;UBERON:0000988!6.34e-16!3;UBERON:0002780!9.23e-16!41;UBERON:0001890!9.23e-16!41;UBERON:0006240!9.23e-16!41;UBERON:0003080!2.44e-15!42;UBERON:0002791!8.43e-14!33;UBERON:0000153!5.17e-13!129;UBERON:0007811!5.17e-13!129;UBERON:0009663!2.44e-12!7;UBERON:0001869!2.27e-11!32;UBERON:0002148!2.61e-11!2;UBERON:0009662!2.61e-11!2;UBERON:0000033!5.82e-11!123;UBERON:0004733!1.37e-10!12;UBERON:0002028!1.37e-10!12;UBERON:0007277!1.37e-10!12;UBERON:0004121!4.97e-10!169;UBERON:0003056!6.52e-10!61;UBERON:0004732!9.33e-10!13;UBERON:0000924!1.07e-09!173;UBERON:0006601!1.07e-09!173;UBERON:0002420!1.27e-09!9;UBERON:0007245!1.27e-09!9;UBERON:0010009!1.27e-09!9;UBERON:0010011!1.27e-09!9;UBERON:0000454!1.27e-09!9;UBERON:0002680!2.93e-09!9;UBERON:0001895!2.93e-09!9;UBERON:0010092!2.93e-09!9;UBERON:0000200!2.15e-08!6;UBERON:0000483!2.45e-08!309;UBERON:0000119!3.36e-08!312;UBERON:0002240!3.43e-08!3;UBERON:0002771!4.40e-08!3;UBERON:0000475!1.44e-07!365;UBERON:0002038!4.58e-07!1;UBERON:0009661!4.58e-07!1;UBERON:0005418!5.43e-07!1;UBERON:0001389!5.43e-07!1;UBERON:0000026!5.43e-07!1;UBERON:0008784!5.43e-07!1;UBERON:0006058!5.43e-07!1;UBERON:0003663!5.43e-07!1;UBERON:0001383!5.43e-07!1;UBERON:0004256!5.43e-07!1;UBERON:0002529!5.43e-07!1;UBERON:0004708!5.43e-07!1;UBERON:0002101!5.43e-07!1;UBERON:0004709!5.43e-07!1;UBERON:0003661!5.43e-07!1;UBERON:0002471!5.43e-07!1;UBERON:0004357!5.43e-07!1;UBERON:0009872!5.43e-07!1;UBERON:0004347!5.43e-07!1;UBERON:0005420!5.43e-07!1;UBERON:0005732!5.43e-07!1;UBERON:0006057!5.43e-07!1;UBERON:0000978!5.43e-07!1;UBERON:0002103!5.43e-07!1;UBERON:0001665!5.43e-07!1;UBERON:0003823!5.43e-07!1;UBERON:0000154!5.43e-07!1;UBERON:0005733!5.43e-07!1;UBERON:0005730!5.43e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0001003;5.93e-08;15!UBERON:0007376;5.93e-08;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001003,5.93e-08,15;UBERON:0007376,5.93e-08,15;UBERON:0007383,5.93e-08,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132529768321485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.702012795417713,0.445893486866185,0,0,0,0,0,0,0,0,0,0,0,0.126995788584338,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137836572484531,0,0.145016693914229,0.255679882248303,0.712256285173899,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,18.1788286553751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0.110579259931225,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134802265961354,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.273810757783986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.408610218334727,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.250381861413,0,0.221858103073705,0,0,0,1.97143852804142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0.478901577171454,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679697329768317,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.647428837187895,0.102662806856247,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0.297046400327086,0,0,0,0,0,0,0,0,0,0,0.716697915757256,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.517164979309476,0.426467963801962,0,0.0645889098360061,0,0,0,0.202117188958219,0.217716747896961,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr7:29900040..29900050,+ | |||
}} |
Revision as of 00:51, 14 September 2013
Short description: | p@chr7:29900040..29900050, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr7:29900040..29900050, + |
Coexpression cluster: | C430_acute_giant_chronic_CD34_CD133_melanoma_skeletal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skin epidermis | 5.93e-08 | 15 |
outer epithelium | 5.93e-08 | 15 |
enveloping layer of ectoderm | 5.93e-08 | 15 |
Ontology term | p-value | n |
---|---|---|
melanoma | 4.52e-50 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.