FFCP PHASE1:Mm9::chr2:98507383..98507413,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=80|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr2:98507383..98507413,+|id=chr2:98507383..98507413,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000553,7.08e-09,6;CL:0000556,7.08e-09,6;CL:0000034,8.15e-09,97;CL:0002320,2.88e-08,46;CL:0000134,2.88e-08,46;CL:0000723,2.98e-08,91;CL:0000048,2.98e-08,91;CL:0000107,6.19e-08,9;CL:0000219,1.10e-07,54|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000010!3.31e-07!11;UBERON:0002021!3.62e-07!10;UBERON:0000411!3.62e-07!10;UBERON:0001950!3.62e-07!10|ontology_enrichment_uberon_v019_2=UBERON:0002021,4.91e-11,10;UBERON:0000411,4.91e-11,10;UBERON:0001950,4.91e-11,10;UBERON:0000010,9.08e-10,11;UBERON:0002384,2.88e-08,46;UBERON:0002410,6.19e-08,9|phase1_expression=0,0,0,0,0,0,0,2.32421982194837,1.68946466582,4.68129052643987,8.73211637950075,6.62108919661292,1.71200729931206,0.874204024189974,11.3257319017325,126.142091583862,60.1623215190206,20.8205029136437,18.2362196695633,24.1902101524877,0.0850432901510698,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,0,0.288851619751275,0,1.63335485009895,2.51118978442145,0,7.85285615960697,4.70585190424811,3.41522742479223,9.22469670759192,2.39203954153597,1.92616169317078,0.183546752161682,0,0,0,0,0,0,0.671130424230945,0,1.00828139742739,0.771778308107841,3.15186783932632,0.515672092277442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.61119299110724,0,0,0,6.43672643332064,2.56943304363071,30.1459068249745,7.74381489283248,0,1.07940638327563,0,1.79210754838934,0,3.74946709671727,4.67614808285164,9.18682893726885,0.422530259330042,0,0,0,0,0,0,1.94112595522402,0,0,0,0,0,0,0.587943535678524,0.125666591329675,0,0,0,3.07357014900077,1.54589062922275,166.312211825381,0,0.585561594023094,0.83778682725382,0,1.07833612055328,0,2.1601938602421,0,0,0.502617408451458,0,0,0,0.162241263067758,0.81471491080253,0,0,0.210441855886474,0.260240885925407,0,0,1.20563854268572,1.42876648217788,0.2562274405697,0.749613796477831,0.517406741478031,0,0.189106080167819,0,0,0,0.348252166522167,0.205782136407943,0.199034266818493,0,0.257347907114715,1.13665399758237,0,0.469052119962192,0.36012412292203,0,0.196764231747404,0.308534225774757,0.232533944750408,0.268273401399619,5.95503246072564,0.493679549740441,2.29834449710733,0,0,0,0,0,0,0.991256348951394,0,0.213288250535234,0.464473343720877,0,0.80673409849337,0,0.380451252225118,0,0,0.502670417600539,0.596869416123452,0,0,0.432276099749388,0,0,0.571242563048644,0,0.203651327845314,0.193952487167626,2.17421041659988,0.126473074248515,0.295220295959204,0.156998727841375,0,0,0.166845105716094,0,2.24862112384854,0,0,0.25462585178142,0,0.648540907100142,0,1.43768206527355,0.744281895337007,0,0,0,0,0,0,0,0.169745085775188,0,0.167506257441816,0.238043640886014,0.975668239288994,0,0.8858587585951,0.797273843287435,1.14704320301017,1.20879487306127,0.289298117163023,1.50791283939272,0.54390568381871,0,0,0.160550589987792,0,0.491804836130026,0.252470927204373,6.62567260774139,3.51394869866975,5.17016154558717,0.716906393857656,2.45078541490634,2.83076530788832,3.64329631507405,7.89090816360542,7.51046778098395,0,0.425820255624806,0.178065603667255,0.162886959353576,0,0,0,0,0.188605079755898,0,0,0,0,0.356497378384721,0.632073515871632,0,0,0,0.36012218806262,0.129358683782755,0,0,0.178368817602071,0,0,0,0,0,1.97863503529776,0.968786560175433,0.965006798850494,0.119372344003136,0.164140899745061,0.874442509889552,0.18542530201051,0,0,2.59272338317596,0.565105371014073,0.546776910884101,1.14389086603261,1.18984900995699,1.81936888020755,1.10559979043539,5.72802370809068,0.474503990371703,0,0.324016022465404,0.209088296014469,0,1.75323650300267,0.165306911450672,0.26175594198403,0,0.621339313086926,1.12738587736838,0,0,0.194451188344048,0.645799117388655,0.337912250981556,0.234714477291508,0.13020438484395,0,0,0.576060012515731,0,0,0.102710957164827,0,0.358053391334963,0.39736270956253,0.120195449519969,0,0.403865799792591,2.28620419965,0.201652370273681,0.194915761479505,0.577271049841977,0.584384510907845,0.226730383615211,0,0.179427713218951,0,0.386379188064381,0,1.09890974560359,0.214368379079066,0,3.3885110557024,4.60325236507177,4.58316410751517,23.0283264340541,4.7955776383945,6.0431511791176,8.77529250301348,5.40385443869065,1.81256963593682,2.5888015587591,2.28332164685189,0,0,0,0.628839487883947,0,0,1.03017528619447,0.320919209591815,0.758091635291392,0.50695859978048,0.754505365544305,1.31098110457835,0.704276676453562,1.14870937911227,0.476293691283074,0.347652977834566,0.964546102318525,0.824171801606613,0.735994600671987,0.685738504770831,0.70990322463735,0.238436189947321,1.0174249164263,0.376437521661322,0.338458431566706,0.914639864363863,1.05227884575137,2.03706170768793,1.12228454331548,1.06771516311757,1.28055827088233,2.04615521584845,0.619747364743864,0.385813221962283,0,0.233931608445408,0.429742108096597,0.765153328275374,0.220591419119515,0.463735671240843|short_description=p@chr2:98507383..98507413,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=80 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr2:98507383..98507413,+ | |||
|id=chr2:98507383..98507413,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000553,7.08e-09,6;CL:0000556,7.08e-09,6;CL:0000034,8.15e-09,97;CL:0002320,2.88e-08,46;CL:0000134,2.88e-08,46;CL:0000723,2.98e-08,91;CL:0000048,2.98e-08,91;CL:0000107,6.19e-08,9;CL:0000219,1.10e-07,54 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000010!3.31e-07!11;UBERON:0002021!3.62e-07!10;UBERON:0000411!3.62e-07!10;UBERON:0001950!3.62e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002021,4.91e-11,10;UBERON:0000411,4.91e-11,10;UBERON:0001950,4.91e-11,10;UBERON:0000010,9.08e-10,11;UBERON:0002384,2.88e-08,46;UBERON:0002410,6.19e-08,9 | |||
|phase1_expression=0,0,0,0,0,0,0,2.32421982194837,1.68946466582,4.68129052643987,8.73211637950075,6.62108919661292,1.71200729931206,0.874204024189974,11.3257319017325,126.142091583862,60.1623215190206,20.8205029136437,18.2362196695633,24.1902101524877,0.0850432901510698,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,0,0.288851619751275,0,1.63335485009895,2.51118978442145,0,7.85285615960697,4.70585190424811,3.41522742479223,9.22469670759192,2.39203954153597,1.92616169317078,0.183546752161682,0,0,0,0,0,0,0.671130424230945,0,1.00828139742739,0.771778308107841,3.15186783932632,0.515672092277442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.61119299110724,0,0,0,6.43672643332064,2.56943304363071,30.1459068249745,7.74381489283248,0,1.07940638327563,0,1.79210754838934,0,3.74946709671727,4.67614808285164,9.18682893726885,0.422530259330042,0,0,0,0,0,0,1.94112595522402,0,0,0,0,0,0,0.587943535678524,0.125666591329675,0,0,0,3.07357014900077,1.54589062922275,166.312211825381,0,0.585561594023094,0.83778682725382,0,1.07833612055328,0,2.1601938602421,0,0,0.502617408451458,0,0,0,0.162241263067758,0.81471491080253,0,0,0.210441855886474,0.260240885925407,0,0,1.20563854268572,1.42876648217788,0.2562274405697,0.749613796477831,0.517406741478031,0,0.189106080167819,0,0,0,0.348252166522167,0.205782136407943,0.199034266818493,0,0.257347907114715,1.13665399758237,0,0.469052119962192,0.36012412292203,0,0.196764231747404,0.308534225774757,0.232533944750408,0.268273401399619,5.95503246072564,0.493679549740441,2.29834449710733,0,0,0,0,0,0,0.991256348951394,0,0.213288250535234,0.464473343720877,0,0.80673409849337,0,0.380451252225118,0,0,0.502670417600539,0.596869416123452,0,0,0.432276099749388,0,0,0.571242563048644,0,0.203651327845314,0.193952487167626,2.17421041659988,0.126473074248515,0.295220295959204,0.156998727841375,0,0,0.166845105716094,0,2.24862112384854,0,0,0.25462585178142,0,0.648540907100142,0,1.43768206527355,0.744281895337007,0,0,0,0,0,0,0,0.169745085775188,0,0.167506257441816,0.238043640886014,0.975668239288994,0,0.8858587585951,0.797273843287435,1.14704320301017,1.20879487306127,0.289298117163023,1.50791283939272,0.54390568381871,0,0,0.160550589987792,0,0.491804836130026,0.252470927204373,6.62567260774139,3.51394869866975,5.17016154558717,0.716906393857656,2.45078541490634,2.83076530788832,3.64329631507405,7.89090816360542,7.51046778098395,0,0.425820255624806,0.178065603667255,0.162886959353576,0,0,0,0,0.188605079755898,0,0,0,0,0.356497378384721,0.632073515871632,0,0,0,0.36012218806262,0.129358683782755,0,0,0.178368817602071,0,0,0,0,0,1.97863503529776,0.968786560175433,0.965006798850494,0.119372344003136,0.164140899745061,0.874442509889552,0.18542530201051,0,0,2.59272338317596,0.565105371014073,0.546776910884101,1.14389086603261,1.18984900995699,1.81936888020755,1.10559979043539,5.72802370809068,0.474503990371703,0,0.324016022465404,0.209088296014469,0,1.75323650300267,0.165306911450672,0.26175594198403,0,0.621339313086926,1.12738587736838,0,0,0.194451188344048,0.645799117388655,0.337912250981556,0.234714477291508,0.13020438484395,0,0,0.576060012515731,0,0,0.102710957164827,0,0.358053391334963,0.39736270956253,0.120195449519969,0,0.403865799792591,2.28620419965,0.201652370273681,0.194915761479505,0.577271049841977,0.584384510907845,0.226730383615211,0,0.179427713218951,0,0.386379188064381,0,1.09890974560359,0.214368379079066,0,3.3885110557024,4.60325236507177,4.58316410751517,23.0283264340541,4.7955776383945,6.0431511791176,8.77529250301348,5.40385443869065,1.81256963593682,2.5888015587591,2.28332164685189,0,0,0,0.628839487883947,0,0,1.03017528619447,0.320919209591815,0.758091635291392,0.50695859978048,0.754505365544305,1.31098110457835,0.704276676453562,1.14870937911227,0.476293691283074,0.347652977834566,0.964546102318525,0.824171801606613,0.735994600671987,0.685738504770831,0.70990322463735,0.238436189947321,1.0174249164263,0.376437521661322,0.338458431566706,0.914639864363863,1.05227884575137,2.03706170768793,1.12228454331548,1.06771516311757,1.28055827088233,2.04615521584845,0.619747364743864,0.385813221962283,0,0.233931608445408,0.429742108096597,0.765153328275374,0.220591419119515,0.463735671240843 | |||
|short_description=p@chr2:98507383..98507413,+ | |||
}} |
Revision as of 00:59, 14 September 2013
Short description: | p@chr2:98507383..98507413, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr2:98507383..98507413, + |
Coexpression cluster: | MCL_coexpression_mm9:80 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
megakaryocyte progenitor cell | 7.08e-09 | 6 |
megakaryocyte | 7.08e-09 | 6 |
stem cell | 8.15e-09 | 97 |
connective tissue cell | 2.88e-08 | 46 |
mesenchymal cell | 2.88e-08 | 46 |
somatic stem cell | 2.98e-08 | 91 |
multi fate stem cell | 2.98e-08 | 91 |
autonomic neuron | 6.19e-08 | 9 |
motile cell | 1.10e-07 | 54 |
Ontology term | p-value | n |
---|---|---|
occipital lobe | 4.91e-11 | 10 |
visual cortex | 4.91e-11 | 10 |
neocortex | 4.91e-11 | 10 |
peripheral nervous system | 9.08e-10 | 11 |
connective tissue | 2.88e-08 | 46 |
autonomic nervous system | 6.19e-08 | 9 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.