FFCP PHASE1:Mm9::chr3:122687322..122687430,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=99526|HGNC=|UniProt=P15975,Q8BSX5,Q3USD9|association_with_transcript=0bp_to_ENSMUST00000090379,ENSMUST00000171981,NM_133857,uc008rez.1,uc008rfa.1,uc008rfb.1,uc008rfc.1,uc008rfd.1_5end|description=CAGE_peak_1_at_Usp53_5end|id=chr3:122687322..122687430,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005156!1.49e-09!26;UBERON:0000990!1.49e-09!26;UBERON:0007023!5.53e-09!51;UBERON:0003133!5.60e-09!24|ontology_enrichment_uberon_v019_2=UBERON:0005156,1.49e-09,26;UBERON:0000990,1.49e-09,26;UBERON:0007023,5.53e-09,51;UBERON:0003133,5.60e-09,24|phase1_expression=13.9329496981171,16.0528687514106,13.6499771816861,16.030603199262,22.0394121176393,15.4448930158939,12.3814699515629,19.7558684865612,24.919603820845,28.7899367376052,5.65019295144166,6.06268408364557,19.174481752295,24.0406106652243,2.6648780945253,3.03712901084739,1.39912375625629,13.5648731104042,14.2599010949968,12.3072999021429,10.6304112688837,3.57447424323187,3.13439746966722,6.07971206614945,7.57050627521661,6.31655160526522,10.3382879078178,12.0663890304098,11.7814520062952,17.8941392129551,9.09095093686749,3.17515336729816,3.07532393792285,0,21.086168241843,16.2909952451323,21.4377824075488,18.4153917524239,20.3147189576188,12.0410461113974,21.1763335691165,18.442228093878,21.3624555333708,7.42791226055906,7.50189291024408,11.9305388905093,3.12956537739216,3.70642765846759,3.07560655828261,6.02732687130279,4.89952475688769,2.87505128729943,14.9326519391385,26.8383992544197,18.1490651536931,7.97504251711436,12.3209379173665,14.4388185837684,2.42779753031517,3.1739458756322,1.90149421051854,2.03306719241479,1.77858959222228,0.899899717281399,0,0.7104801149461,4.19440154725767,3.84218305321555,2.7996195323289,2.16009501330705,3.15487442027073,5.71301968807607,5.30084498283872,1.46988959057945,1.91690942036473,0,12.1127469099328,9.44886301830389,11.6740965274745,1.97829431595291,3.29355516968675,3.64639359389732,8.65467296904281,3.93933827022176,12.3766580699216,9.1334861496837,7.83044244395066,5.77838282058432,7.49689313998522,3.09843396437821,18.2614627882057,9.46466264679525,4.75979933595425,5.39703191637817,7.14754059192436,7.6164570806547,8.00533194750986,1.70430322578058,1.55871602761721,1.06001872353102,10.4224130634744,0,10.1922095882658,0,16.8863011988747,15.7083116594561,14.6602089054287,9.36307813696292,18.6435276225964,19.7428044956217,9.54169297213747,9.43842982767638,11.3001593655469,9.04335843315735,14.2282335634203,13.3206586809456,36.0904652892186,13.7369389073916,3.5384422077995,7.76480879747564,9.27534377533653,11.6370060752453,46.5979403045305,19.6163133997737,18.6407569063975,7.91916871146633,5.63131085177825,2.99951365496704,6.73472203487243,15.8778077769112,10.5225138648284,4.64921102817598,9.90798625095976,10.7400492078739,11.2205544062162,14.9261962022337,16.8034950353022,15.0532434438213,19.2069296409593,12.6265113531884,4.03373373184381,4.13823787980251,4.32149111532838,9.79581315932148,11.838350852331,8.96796041993949,9.65127762965207,13.4525752784288,4.95806383745537,4.9167580843633,6.33424046990216,3.28793598641362,5.83899223373756,16.0195996600197,13.1700567301084,12.9372273432021,4.91549231119264,2.31613116403244,4.26245249093389,6.62802472113606,10.0846205791871,7.38254451990161,6.8655973319711,5.3126342571799,7.0962871928194,6.51095045301142,7.77992864058896,7.12268588439734,7.5697530960201,8.53670813211295,8.83650024049827,9.79539915749726,8.56245449635098,9.39444931322602,11.565947171027,5.55684906848136,8.59088835757875,8.46241813323342,3.41261200856374,7.66381017139447,7.34544529535932,9.88249270654378,11.5636582799333,11.223311940641,14.2358718463353,10.2113351928887,12.8180956488137,14.3248659869629,15.4021628824105,11.6846523125049,20.3169766882213,21.9055400579804,2.65535061334314,8.45438993311993,9.01661885384643,14.4592442770173,10.6673867942194,18.3755848112635,17.3900477091708,22.8795729368383,21.5088257142683,24.6794327843601,8.30067355844017,3.33690211432188,4.91397487783007,3.14806957338795,3.85434230638156,4.3411888755435,5.34714288740982,5.17853047411459,10.8630601939274,4.11842119782122,17.2521847832825,5.20997326735905,4.36852742360385,10.1031551178845,8.43167843552987,6.27176577772377,14.7802552133284,6.253216588426,5.37784422258685,5.09235257325564,7.27539769694356,6.70025029767263,7.85544014923845,13.4642217021881,10.5615546551148,9.30151696524855,9.56728611944923,14.7476983244164,11.569893785015,15.3328002096402,4.52373851817817,3.26343410291226,23.6046851049137,32.008662571349,20.2293743384618,19.8087750340823,7.54100748732707,13.6334300690361,5.99465616890888,7.41833614163613,4.73931475012158,7.40803273652911,5.34716817797746,5.66153061577665,6.8817819284732,6.13737301613755,7.90575555893047,9.96096080907602,29.0977174676951,9.25941139069727,21.0124177566113,16.8269525431986,15.9294166007955,4.61283208694465,7.25576536715402,8.86443874852721,4.42952839321159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| ||
|EntrezGene=99526 | |||
|HGNC= | |||
|UniProt=P15975,Q8BSX5,Q3USD9 | |||
|association_with_transcript=0bp_to_ENSMUST00000090379,ENSMUST00000171981,NM_133857,uc008rez.1,uc008rfa.1,uc008rfb.1,uc008rfc.1,uc008rfd.1_5end | |||
|description=CAGE_peak_1_at_Usp53_5end | |||
|id=chr3:122687322..122687430,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005156!1.49e-09!26;UBERON:0000990!1.49e-09!26;UBERON:0007023!5.53e-09!51;UBERON:0003133!5.60e-09!24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005156,1.49e-09,26;UBERON:0000990,1.49e-09,26;UBERON:0007023,5.53e-09,51;UBERON:0003133,5.60e-09,24 | |||
|phase1_expression=13.9329496981171,16.0528687514106,13.6499771816861,16.030603199262,22.0394121176393,15.4448930158939,12.3814699515629,19.7558684865612,24.919603820845,28.7899367376052,5.65019295144166,6.06268408364557,19.174481752295,24.0406106652243,2.6648780945253,3.03712901084739,1.39912375625629,13.5648731104042,14.2599010949968,12.3072999021429,10.6304112688837,3.57447424323187,3.13439746966722,6.07971206614945,7.57050627521661,6.31655160526522,10.3382879078178,12.0663890304098,11.7814520062952,17.8941392129551,9.09095093686749,3.17515336729816,3.07532393792285,0,21.086168241843,16.2909952451323,21.4377824075488,18.4153917524239,20.3147189576188,12.0410461113974,21.1763335691165,18.442228093878,21.3624555333708,7.42791226055906,7.50189291024408,11.9305388905093,3.12956537739216,3.70642765846759,3.07560655828261,6.02732687130279,4.89952475688769,2.87505128729943,14.9326519391385,26.8383992544197,18.1490651536931,7.97504251711436,12.3209379173665,14.4388185837684,2.42779753031517,3.1739458756322,1.90149421051854,2.03306719241479,1.77858959222228,0.899899717281399,0,0.7104801149461,4.19440154725767,3.84218305321555,2.7996195323289,2.16009501330705,3.15487442027073,5.71301968807607,5.30084498283872,1.46988959057945,1.91690942036473,0,12.1127469099328,9.44886301830389,11.6740965274745,1.97829431595291,3.29355516968675,3.64639359389732,8.65467296904281,3.93933827022176,12.3766580699216,9.1334861496837,7.83044244395066,5.77838282058432,7.49689313998522,3.09843396437821,18.2614627882057,9.46466264679525,4.75979933595425,5.39703191637817,7.14754059192436,7.6164570806547,8.00533194750986,1.70430322578058,1.55871602761721,1.06001872353102,10.4224130634744,0,10.1922095882658,0,16.8863011988747,15.7083116594561,14.6602089054287,9.36307813696292,18.6435276225964,19.7428044956217,9.54169297213747,9.43842982767638,11.3001593655469,9.04335843315735,14.2282335634203,13.3206586809456,36.0904652892186,13.7369389073916,3.5384422077995,7.76480879747564,9.27534377533653,11.6370060752453,46.5979403045305,19.6163133997737,18.6407569063975,7.91916871146633,5.63131085177825,2.99951365496704,6.73472203487243,15.8778077769112,10.5225138648284,4.64921102817598,9.90798625095976,10.7400492078739,11.2205544062162,14.9261962022337,16.8034950353022,15.0532434438213,19.2069296409593,12.6265113531884,4.03373373184381,4.13823787980251,4.32149111532838,9.79581315932148,11.838350852331,8.96796041993949,9.65127762965207,13.4525752784288,4.95806383745537,4.9167580843633,6.33424046990216,3.28793598641362,5.83899223373756,16.0195996600197,13.1700567301084,12.9372273432021,4.91549231119264,2.31613116403244,4.26245249093389,6.62802472113606,10.0846205791871,7.38254451990161,6.8655973319711,5.3126342571799,7.0962871928194,6.51095045301142,7.77992864058896,7.12268588439734,7.5697530960201,8.53670813211295,8.83650024049827,9.79539915749726,8.56245449635098,9.39444931322602,11.565947171027,5.55684906848136,8.59088835757875,8.46241813323342,3.41261200856374,7.66381017139447,7.34544529535932,9.88249270654378,11.5636582799333,11.223311940641,14.2358718463353,10.2113351928887,12.8180956488137,14.3248659869629,15.4021628824105,11.6846523125049,20.3169766882213,21.9055400579804,2.65535061334314,8.45438993311993,9.01661885384643,14.4592442770173,10.6673867942194,18.3755848112635,17.3900477091708,22.8795729368383,21.5088257142683,24.6794327843601,8.30067355844017,3.33690211432188,4.91397487783007,3.14806957338795,3.85434230638156,4.3411888755435,5.34714288740982,5.17853047411459,10.8630601939274,4.11842119782122,17.2521847832825,5.20997326735905,4.36852742360385,10.1031551178845,8.43167843552987,6.27176577772377,14.7802552133284,6.253216588426,5.37784422258685,5.09235257325564,7.27539769694356,6.70025029767263,7.85544014923845,13.4642217021881,10.5615546551148,9.30151696524855,9.56728611944923,14.7476983244164,11.569893785015,15.3328002096402,4.52373851817817,3.26343410291226,23.6046851049137,32.008662571349,20.2293743384618,19.8087750340823,7.54100748732707,13.6334300690361,5.99465616890888,7.41833614163613,4.73931475012158,7.40803273652911,5.34716817797746,5.66153061577665,6.8817819284732,6.13737301613755,7.90575555893047,9.96096080907602,29.0977174676951,9.25941139069727,21.0124177566113,16.8269525431986,15.9294166007955,4.61283208694465,7.25576536715402,8.86443874852721,4.42952839321159,11.0676653259814,12.1461297789064,11.2695456138027,11.0514187299264,17.0659849285341,14.7586052004998,7.21948802737308,24.5116516142727,5.40183282093931,1.94038025674132,8.57348140126369,12.2364761213169,17.1234064897988,19.9104314928566,14.3098526083862,90.1139358964648,28.5973295666157,14.3343458735725,17.4779428117969,12.2712964288888,12.7260271598409,14.3246812803764,22.8155850645635,10.7847909553045,24.1052892613663,5.12612642393558,7.22354037871279,5.92622487583077,2.44878994106098,4.23752105935178,2.51655990527175,13.5982743995084,12.3157278044819,13.8199973804424,22.9120948323627,5.53587988766987,12.8091264289915,15.0127423742304,24.0451540416639,21.617893810871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| |||
|short_description=p1@Usp53 | |||
}} | |||
Revision as of 01:25, 14 September 2013
| Short description: | p1@Usp53 |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_1_at_Usp53_5end |
| Coexpression cluster: | NA |
| Association with transcript: | 0bp_to_ENSMUST00000090379, ENSMUST00000171981, NM_133857, uc008rez.1, uc008rfa.1, uc008rfb.1, uc008rfc.1, uc008rfd.1_5end |
| EntrezGene: | Usp53 |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| reproductive structure | 1.49e-09 | 26 |
| reproductive system | 1.49e-09 | 26 |
| adult organism | 5.53e-09 | 51 |
| reproductive organ | 5.60e-09 | 24 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
