FFCP PHASE1:Hg19::chr7:47443023..47443044,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=64759|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=21616|TSSclassifier=S|UniProt=|association_with_transcript=-1bp_to_ENST00000469470_5end|coexpression_cluster_id=C88|description=CAGE_peak_16_at_TNS3_5end|id=chr7:47443023..47443044,-|ontology_enrichment_celltype=CL:0000148!2.06e-16!10;CL:0000541!2.06e-16!10;CL:0000147!2.25e-11!14;CL:0002567!2.38e-11!3;CL:0000710!1.33e-07!20|ontology_enrichment_celltype_v019=CL:0000148;1.23e-69;10!CL:0000147;1.10e-49;14!CL:0002567;5.19e-44;3!CL:0000710;1.07e-34;20!CL:0000075;1.29e-25;27!CL:0002077;6.37e-18;34!CL:0002566;9.99e-16;1|ontology_enrichment_celltype_v019_2=CL:0000148,1.36e-69,10;CL:0000541,1.36e-69,10;CL:0000147,1.18e-49,14;CL:0002567,5.19e-44,3;CL:0000710,1.12e-34,20;CL:0000075,1.34e-25,27;CL:0002077,3.00e-20,34;CL:0000333,6.40e-16,41;CL:0002566,9.99e-16,1;CL:0000133,4.45e-11,59;CL:0000221,4.88e-09,72|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:1909!5.85e-08!2|ontology_enrichment_disease_v019=DOID:1909;3.41e-29;2|ontology_enrichment_disease_v019_2=DOID:1909,2.96e-29,2|ontology_enrichment_uberon=UBERON:0001049!1.89e-45!57;UBERON:0005068!1.89e-45!57;UBERON:0006241!1.89e-45!57;UBERON:0007135!1.89e-45!57;UBERON:0002616!6.67e-38!59;UBERON:0007023!1.13e-36!115;UBERON:0005743!1.03e-35!86;UBERON:0000955!1.07e-35!69;UBERON:0006238!1.07e-35!69;UBERON:0001017!2.48e-35!82;UBERON:0002780!1.70e-32!41;UBERON:0001890!1.70e-32!41;UBERON:0006240!1.70e-32!41;UBERON:0003080!1.35e-31!42;UBERON:0000073!1.59e-31!94;UBERON:0001016!1.59e-31!94;UBERON:0002020!8.70e-30!34;UBERON:0003528!8.70e-30!34;UBERON:0001893!1.14e-29!34;UBERON:0003075!1.19e-29!86;UBERON:0007284!1.19e-29!86;UBERON:0002346!5.78e-28!90;UBERON:0002791!1.43e-27!33;UBERON:0001869!2.12e-25!32;UBERON:0002619!2.62e-22!22;UBERON:0003056!3.20e-22!61;UBERON:0001950!4.29e-21!20;UBERON:0000033!1.43e-19!123;UBERON:0000956!2.40e-19!25;UBERON:0000203!2.40e-19!25;UBERON:0000153!2.81e-18!129;UBERON:0007811!2.81e-18!129;UBERON:0002298!4.76e-18!8;UBERON:0004121!2.60e-17!169;UBERON:0000924!1.07e-16!173;UBERON:0006601!1.07e-16!173;UBERON:0003076!9.91e-15!15;UBERON:0003057!9.91e-15!15;UBERON:0002308!2.72e-12!9;UBERON:0000125!2.72e-12!9;UBERON:0000200!3.71e-12!6;UBERON:0004733!1.59e-11!12;UBERON:0002028!1.59e-11!12;UBERON:0007277!1.59e-11!12;UBERON:0004732!1.47e-10!13;UBERON:0001896!2.47e-10!3;UBERON:0005290!2.47e-10!3;UBERON:0010096!2.47e-10!3;UBERON:0001872!5.43e-10!5;UBERON:0006331!8.30e-10!3;UBERON:0002771!1.53e-09!3;UBERON:0000988!1.72e-09!3;UBERON:0001871!3.23e-09!7;UBERON:0002420!6.53e-09!9;UBERON:0007245!6.53e-09!9;UBERON:0010009!6.53e-09!9;UBERON:0010011!6.53e-09!9;UBERON:0000454!6.53e-09!9;UBERON:0000025!1.13e-08!194;UBERON:0000369!3.95e-08!4;UBERON:0002435!3.95e-08!4;UBERON:0000204!3.95e-08!4;UBERON:0010082!3.95e-08!4;UBERON:0009663!1.20e-07!7;UBERON:0002148!4.15e-07!2;UBERON:0009662!4.15e-07!2|ontology_enrichment_uberon_v019=UBERON:0006834;2.95e-15;1|ontology_enrichment_uberon_v019_2=UBERON:0006834,3.17e-15,1|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327447688744282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.33419046094885,11.8416411923066,26.9600128583108,18.8179690624976,8.43185440167253,8.40960561962969,12.0047101704843,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.500170521059677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.844016498463076,0,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0.969332746095218,0.185536196323703,0,0,0,0,0,0,0,0,0,0,0,0.964771509003264,0,0.110579259931225,0,0,0,0,0.538651809526579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265372693510018,0,0,0,0,0.269604531922708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.80784592624426,0,0,0.253243183823515,0,0,0.640358984218058,0,0.144090417154106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.544813624446302,0.160753148465019,0,0,0,0,0.303747783290123,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0.226624183040251,0,0,0.258565912723101,0.39669780522807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0.3755727921195,0.573409195690071,0.887432412294818,0.372578417648301,0,0,4.85277176133273,8.84942533989399,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150257608997218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276516872303462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.899209151350433,0,0.159633859057151,0,0,0.138314504928436,0.807378228159255,0,0,0,0,0,0,0,0.198916222116275,1.20336525358812,0,0,0,0,0,0.202612753855184,0,0.206686796501184,0.380494861163441,0.546974809018219,0,0,0,0,0,0.336283722218824,0,0.682986574053893,0,0,0,0.0679697329768317,0.197318320688547,0,0,0,0.942693539496011,0,1.82631744101899,0,0,7.29060750601895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0.231522474323834,0.437119121007915,0,0,0,0.196308467114945,0.297046400327086,0,0,0,0,0,0,0,0,0,0,0.286679166302903,0,0.135982980381829,0,0,0,0,0,0.126166424835079,0,0,0,0,0,0,0,0,0,0.310298987585686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.71138021856013,0.813792356631477,0,0,0|short_description=p16@TNS3}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=64759 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21616 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=-1bp_to_ENST00000469470_5end | |||
|coexpression_cluster_id=C88 | |||
|description=CAGE_peak_16_at_TNS3_5end | |||
|id=chr7:47443023..47443044,- | |||
|ontology_enrichment_celltype=CL:0000148!2.06e-16!10;CL:0000541!2.06e-16!10;CL:0000147!2.25e-11!14;CL:0002567!2.38e-11!3;CL:0000710!1.33e-07!20 | |||
|ontology_enrichment_celltype_v019=CL:0000148;1.23e-69;10!CL:0000147;1.10e-49;14!CL:0002567;5.19e-44;3!CL:0000710;1.07e-34;20!CL:0000075;1.29e-25;27!CL:0002077;6.37e-18;34!CL:0002566;9.99e-16;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000148,1.36e-69,10;CL:0000541,1.36e-69,10;CL:0000147,1.18e-49,14;CL:0002567,5.19e-44,3;CL:0000710,1.12e-34,20;CL:0000075,1.34e-25,27;CL:0002077,3.00e-20,34;CL:0000333,6.40e-16,41;CL:0002566,9.99e-16,1;CL:0000133,4.45e-11,59;CL:0000221,4.88e-09,72 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1909!5.85e-08!2 | |||
|ontology_enrichment_disease_v019=DOID:1909;3.41e-29;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1909,2.96e-29,2 | |||
|ontology_enrichment_uberon=UBERON:0001049!1.89e-45!57;UBERON:0005068!1.89e-45!57;UBERON:0006241!1.89e-45!57;UBERON:0007135!1.89e-45!57;UBERON:0002616!6.67e-38!59;UBERON:0007023!1.13e-36!115;UBERON:0005743!1.03e-35!86;UBERON:0000955!1.07e-35!69;UBERON:0006238!1.07e-35!69;UBERON:0001017!2.48e-35!82;UBERON:0002780!1.70e-32!41;UBERON:0001890!1.70e-32!41;UBERON:0006240!1.70e-32!41;UBERON:0003080!1.35e-31!42;UBERON:0000073!1.59e-31!94;UBERON:0001016!1.59e-31!94;UBERON:0002020!8.70e-30!34;UBERON:0003528!8.70e-30!34;UBERON:0001893!1.14e-29!34;UBERON:0003075!1.19e-29!86;UBERON:0007284!1.19e-29!86;UBERON:0002346!5.78e-28!90;UBERON:0002791!1.43e-27!33;UBERON:0001869!2.12e-25!32;UBERON:0002619!2.62e-22!22;UBERON:0003056!3.20e-22!61;UBERON:0001950!4.29e-21!20;UBERON:0000033!1.43e-19!123;UBERON:0000956!2.40e-19!25;UBERON:0000203!2.40e-19!25;UBERON:0000153!2.81e-18!129;UBERON:0007811!2.81e-18!129;UBERON:0002298!4.76e-18!8;UBERON:0004121!2.60e-17!169;UBERON:0000924!1.07e-16!173;UBERON:0006601!1.07e-16!173;UBERON:0003076!9.91e-15!15;UBERON:0003057!9.91e-15!15;UBERON:0002308!2.72e-12!9;UBERON:0000125!2.72e-12!9;UBERON:0000200!3.71e-12!6;UBERON:0004733!1.59e-11!12;UBERON:0002028!1.59e-11!12;UBERON:0007277!1.59e-11!12;UBERON:0004732!1.47e-10!13;UBERON:0001896!2.47e-10!3;UBERON:0005290!2.47e-10!3;UBERON:0010096!2.47e-10!3;UBERON:0001872!5.43e-10!5;UBERON:0006331!8.30e-10!3;UBERON:0002771!1.53e-09!3;UBERON:0000988!1.72e-09!3;UBERON:0001871!3.23e-09!7;UBERON:0002420!6.53e-09!9;UBERON:0007245!6.53e-09!9;UBERON:0010009!6.53e-09!9;UBERON:0010011!6.53e-09!9;UBERON:0000454!6.53e-09!9;UBERON:0000025!1.13e-08!194;UBERON:0000369!3.95e-08!4;UBERON:0002435!3.95e-08!4;UBERON:0000204!3.95e-08!4;UBERON:0010082!3.95e-08!4;UBERON:0009663!1.20e-07!7;UBERON:0002148!4.15e-07!2;UBERON:0009662!4.15e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0006834;2.95e-15;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006834,3.17e-15,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327447688744282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.33419046094885,11.8416411923066,26.9600128583108,18.8179690624976,8.43185440167253,8.40960561962969,12.0047101704843,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.500170521059677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.844016498463076,0,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0.969332746095218,0.185536196323703,0,0,0,0,0,0,0,0,0,0,0,0.964771509003264,0,0.110579259931225,0,0,0,0,0.538651809526579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265372693510018,0,0,0,0,0.269604531922708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.80784592624426,0,0,0.253243183823515,0,0,0.640358984218058,0,0.144090417154106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.544813624446302,0.160753148465019,0,0,0,0,0.303747783290123,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0.226624183040251,0,0,0.258565912723101,0.39669780522807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0.3755727921195,0.573409195690071,0.887432412294818,0.372578417648301,0,0,4.85277176133273,8.84942533989399,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150257608997218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276516872303462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.899209151350433,0,0.159633859057151,0,0,0.138314504928436,0.807378228159255,0,0,0,0,0,0,0,0.198916222116275,1.20336525358812,0,0,0,0,0,0.202612753855184,0,0.206686796501184,0.380494861163441,0.546974809018219,0,0,0,0,0,0.336283722218824,0,0.682986574053893,0,0,0,0.0679697329768317,0.197318320688547,0,0,0,0.942693539496011,0,1.82631744101899,0,0,7.29060750601895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0.231522474323834,0.437119121007915,0,0,0,0.196308467114945,0.297046400327086,0,0,0,0,0,0,0,0,0,0,0.286679166302903,0,0.135982980381829,0,0,0,0,0,0.126166424835079,0,0,0,0,0,0,0,0,0,0.310298987585686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.71138021856013,0.813792356631477,0,0,0 | |||
|short_description=p16@TNS3 | |||
}} |
Revision as of 01:27, 14 September 2013
Short description: | p16@TNS3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_16_at_TNS3_5end |
Coexpression cluster: | C88_Melanocyte_melanoma_Macrophage_Mesenchymal_migratory_Dendritic_Monocytederived |
Association with transcript: | -1bp_to_ENST00000469470_5end |
EntrezGene: | TNS3 |
HGNC: | 21616 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 1.36e-69 | 10 |
melanoblast | 1.36e-69 | 10 |
pigment cell | 1.18e-49 | 14 |
light melanocyte | 5.19e-44 | 3 |
neurecto-epithelial cell | 1.12e-34 | 20 |
columnar/cuboidal epithelial cell | 1.34e-25 | 27 |
ecto-epithelial cell | 3.00e-20 | 34 |
migratory neural crest cell | 6.40e-16 | 41 |
dark melanocyte | 9.99e-16 | 1 |
neurectodermal cell | 4.45e-11 | 59 |
ectodermal cell | 4.88e-09 | 72 |
Ontology term | p-value | n |
---|---|---|
uterus or analog | 3.17e-15 | 1 |
Ontology term | p-value | n |
---|---|---|
melanoma | 2.96e-29 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.