FFCP PHASE1:Hg19::chr7:7680052..7680078,-: Difference between revisions
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{{FFCP | 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8,3.7558064960669,0.691259661814092,2.58136415292167,14.1998400876678,16.19054690424,3.38709640152743,16.2665876666276,3.72247662797184,11.4664672677292,8.38915738483442,32.0951263921845,33.1616755951773,1.94228651156368,3.07988420568741,6.95888658802919,4.85710993059139,45.6181953751106,52.1251030922785,15.1028515287512,29.5918734942075,10.4443490908158,33.3627884282349,5.86523601620379,10.9279780251979,60.2006139342749,2.69663153929296,7.54164950725203,6.67448788190814,4.1586496045792,5.9171801861676,7.98657439032739,7.04879384848902,4.18976271828252,21.5872896797847,19.4623793080167,10.5868461514708,25.757478707223,4.3820183294791,1.83491713361816,5.3035645766037,18.1437296522162,8.49893627386434,2.18175345170189,4.7612415646386,7.43990036333503,7.85698568673411,10.8156640530947,31.5416062087697,47.4212582322439,41.177012828717,17.032134566911,19.2396531791204,13.600445131157,37.6061308938563,7.04741893429626,6.16317499359211,6.63335551567024,3.82702084689012,3.83821167421766,5.23741749220229,6.00676861474857,6.95236800113608,18.27749360064,4.96447834569686,4.85081253499726,8.05551967218757,5.4757328173645,6.73520530145875,5.02055437748735,4.32458463509817,35.08480877133,30.9509303045375,5.7921684686082,5.03021131796887,16.4248659682418,3.66724332548599,8.13792356631477,1.99727032255654,4.02547587182052,13.784445169039|short_description=p2@RPA3}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=6119 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10291 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=129bp_to_ENST00000462723_5end | |||
|coexpression_cluster_id=C1868 | |||
|description=CAGE_peak_2_at_RPA3_5end | |||
|id=chr7:7680052..7680078,- | |||
|ontology_enrichment_celltype=CL:0000066!4.42e-15!254;CL:0000012!8.65e-10!682;CL:0000548!1.92e-09!679;CL:0000004!1.92e-09!679;CL:0000255!1.92e-09!679;CL:0000542!6.98e-08!53;CL:0000051!6.98e-08!53;CL:0000003!1.23e-07!722;CL:0000838!1.79e-07!52;CL:0000945!2.95e-07!24;CL:0000826!2.95e-07!24 | |||
|ontology_enrichment_celltype_v019=CL:0000945;2.61e-07;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.77e-15,253;CL:0000542,6.98e-08,53;CL:0000051,6.98e-08,53;CL:0000838,1.79e-07,52;CL:0000945,2.95e-07,24;CL:0000826,2.95e-07,24 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!1.26e-45!235;DOID:14566!1.87e-44!239;DOID:0050687!9.13e-31!143;DOID:305!5.16e-30!106;DOID:0050686!1.63e-17!137;DOID:2531!3.95e-09!51;DOID:0060083!3.95e-09!51 | |||
|ontology_enrichment_disease_v019=DOID:305;1.29e-09;106!DOID:0050687;6.99e-08;143 | |||
|ontology_enrichment_disease_v019_2=DOID:162,1.26e-45,235;DOID:14566,1.88e-44,239;DOID:0050687,9.14e-31,143;DOID:305,5.15e-30,106;DOID:0050686,1.63e-17,137;DOID:2531,3.95e-09,51;DOID:0060083,3.95e-09,51 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| |||
|short_description=p2@RPA3 | |||
}} |
Revision as of 02:02, 14 September 2013
Short description: | p2@RPA3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_RPA3_5end |
Coexpression cluster: | C1868_hereditary_teratocarcinoma_adrenal_epitheloid_large_acantholytic_Reticulocytes |
Association with transcript: | 129bp_to_ENST00000462723_5end |
EntrezGene: | RPA3 |
HGNC: | 10291 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.77e-15 | 253 |
lymphocyte | 6.98e-08 | 53 |
common lymphoid progenitor | 6.98e-08 | 53 |
lymphoid lineage restricted progenitor cell | 1.79e-07 | 52 |
lymphocyte of B lineage | 2.95e-07 | 24 |
pro-B cell | 2.95e-07 | 24 |
Ontology term | p-value | n |
---|---|---|
cancer | 1.26e-45 | 235 |
disease of cellular proliferation | 1.88e-44 | 239 |
cell type cancer | 9.14e-31 | 143 |
carcinoma | 5.15e-30 | 106 |
organ system cancer | 1.63e-17 | 137 |
hematologic cancer | 3.95e-09 | 51 |
immune system cancer | 3.95e-09 | 51 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.