FFCP PHASE1:Hg19::chr8:110615669..110615692,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=55638|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=26011|TSSclassifier=S|UniProt=E9PL50|association_with_transcript=0bp_to_ENST00000533394_5end|coexpression_cluster_id=C211|description=CAGE_peak_11_at_SYBU_5end|id=chr8:110615669..110615692,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000182;3.77e-08;12|ontology_enrichment_celltype_v019_2=CL:0000182,3.77e-08,12|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!4.70e-50!115;UBERON:0001049!1.61e-37!57;UBERON:0005068!1.61e-37!57;UBERON:0006241!1.61e-37!57;UBERON:0007135!1.61e-37!57;UBERON:0001017!6.77e-33!82;UBERON:0005743!1.46e-32!86;UBERON:0002616!2.50e-29!59;UBERON:0000955!1.02e-28!69;UBERON:0006238!1.02e-28!69;UBERON:0000073!2.12e-28!94;UBERON:0001016!2.12e-28!94;UBERON:0002780!5.82e-27!41;UBERON:0001890!5.82e-27!41;UBERON:0006240!5.82e-27!41;UBERON:0003080!3.70e-26!42;UBERON:0003075!4.57e-26!86;UBERON:0007284!4.57e-26!86;UBERON:0002346!1.96e-24!90;UBERON:0002020!2.98e-21!34;UBERON:0003528!2.98e-21!34;UBERON:0001893!3.56e-21!34;UBERON:0002791!1.03e-19!33;UBERON:0001869!2.48e-18!32;UBERON:0003056!2.59e-17!61;UBERON:0000025!1.70e-14!194;UBERON:0002308!4.38e-14!9;UBERON:0000125!4.38e-14!9;UBERON:0000033!6.02e-14!123;UBERON:0000153!7.41e-13!129;UBERON:0007811!7.41e-13!129;UBERON:0004111!7.87e-13!241;UBERON:0002619!1.11e-12!22;UBERON:0003076!2.16e-12!15;UBERON:0003057!2.16e-12!15;UBERON:0004121!7.89e-12!169;UBERON:0001950!8.13e-12!20;UBERON:0000924!2.59e-11!173;UBERON:0006601!2.59e-11!173;UBERON:0002420!4.38e-11!9;UBERON:0007245!4.38e-11!9;UBERON:0010009!4.38e-11!9;UBERON:0010011!4.38e-11!9;UBERON:0000454!4.38e-11!9;UBERON:0000956!7.44e-11!25;UBERON:0000203!7.44e-11!25;UBERON:0000481!1.04e-10!347;UBERON:0009663!1.44e-10!7;UBERON:0000062!2.93e-10!511;UBERON:0000477!8.26e-10!286;UBERON:0000483!1.38e-09!309;UBERON:0002368!2.05e-09!35;UBERON:0000119!2.33e-09!312;UBERON:0002298!4.54e-09!8;UBERON:0000200!1.03e-08!6;UBERON:0002107!1.25e-08!19;UBERON:0006925!1.25e-08!19;UBERON:0008836!1.25e-08!19;UBERON:0006947!4.12e-08!3;UBERON:0004054!4.12e-08!3;UBERON:0004733!7.04e-08!12;UBERON:0002028!7.04e-08!12;UBERON:0007277!7.04e-08!12;UBERON:0002530!8.53e-08!59;UBERON:0000949!8.91e-08!45;UBERON:0000475!1.35e-07!365;UBERON:0009497!1.40e-07!25;UBERON:0000015!1.40e-07!25;UBERON:0002423!1.40e-07!25;UBERON:0006235!1.40e-07!25;UBERON:0004161!1.40e-07!25;UBERON:0001894!2.42e-07!7;UBERON:0006222!2.42e-07!7;UBERON:0008835!3.46e-07!22;UBERON:0003894!3.46e-07!22;UBERON:0004732!3.46e-07!13;UBERON:0002240!4.65e-07!3;UBERON:0006331!4.65e-07!3;UBERON:0000988!5.39e-07!3;UBERON:0002771!6.66e-07!3;UBERON:0009854!8.59e-07!23;UBERON:0003929!9.11e-07!54|ontology_enrichment_uberon_v019=UBERON:0005409;2.64e-15;22!UBERON:0006947;2.86e-14;3!UBERON:0004054;2.86e-14;3!UBERON:0000160;6.15e-14;17!UBERON:0002107;2.70e-13;19!UBERON:0006925;2.70e-13;19!UBERON:0001000;1.37e-11;1!UBERON:0005352;1.37e-11;1!UBERON:0001301;4.44e-11;1!UBERON:0005904;6.17e-11;4!UBERON:0002423;4.48e-10;25!UBERON:0004921;2.40e-09;33!UBERON:0002108;4.49e-09;4!UBERON:0000349;9.95e-09;5!UBERON:0002365;4.30e-08;31!UBERON:0002330;4.30e-08;31!UBERON:0001007;4.95e-08;81!UBERON:0002368;4.71e-07;33!UBERON:0000949;9.44e-07;43|ontology_enrichment_uberon_v019_2=UBERON:0006947,3.17e-14,3;UBERON:0004054,3.17e-14,3;UBERON:0000160,5.82e-14,17;UBERON:0005409,1.59e-13,25;UBERON:0002107,2.60e-13,19;UBERON:0006925,2.60e-13,19;UBERON:0008836,2.60e-13,19;UBERON:0001000,1.45e-11,1;UBERON:0005352,1.45e-11,1;UBERON:0008835,1.76e-11,22;UBERON:0003894,1.76e-11,22;UBERON:0001301,4.91e-11,1;UBERON:0009854,5.62e-11,23;UBERON:0005904,6.65e-11,4;UBERON:0007499,4.35e-10,25;UBERON:0009497,4.35e-10,25;UBERON:0000015,4.35e-10,25;UBERON:0002423,4.35e-10,25;UBERON:0006235,4.35e-10,25;UBERON:0004161,4.35e-10,25;UBERON:0009856,1.08e-09,26;UBERON:0002108,4.32e-09,4;UBERON:0000349,1.12e-08,5;UBERON:0004921,1.29e-08,118;UBERON:0002365,4.18e-08,31;UBERON:0002330,4.18e-08,31;UBERON:0000949,1.03e-07,45;UBERON:0011216,1.46e-07,223;UBERON:0002368,3.70e-07,35|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,5.07020139287323,1.96565443335525,9.45263850690247,0,2.33678033231916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335032530668698,0,0,0,0,0.12269149171914,0,0,0,0,0,0,0.601892199455438,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=55638 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26011 | |||
|TSSclassifier=S | |||
|UniProt=E9PL50 | |||
|association_with_transcript=0bp_to_ENST00000533394_5end | |||
|coexpression_cluster_id=C211 | |||
|description=CAGE_peak_11_at_SYBU_5end | |||
|id=chr8:110615669..110615692,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000182;3.77e-08;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,3.77e-08,12 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.70e-50!115;UBERON:0001049!1.61e-37!57;UBERON:0005068!1.61e-37!57;UBERON:0006241!1.61e-37!57;UBERON:0007135!1.61e-37!57;UBERON:0001017!6.77e-33!82;UBERON:0005743!1.46e-32!86;UBERON:0002616!2.50e-29!59;UBERON:0000955!1.02e-28!69;UBERON:0006238!1.02e-28!69;UBERON:0000073!2.12e-28!94;UBERON:0001016!2.12e-28!94;UBERON:0002780!5.82e-27!41;UBERON:0001890!5.82e-27!41;UBERON:0006240!5.82e-27!41;UBERON:0003080!3.70e-26!42;UBERON:0003075!4.57e-26!86;UBERON:0007284!4.57e-26!86;UBERON:0002346!1.96e-24!90;UBERON:0002020!2.98e-21!34;UBERON:0003528!2.98e-21!34;UBERON:0001893!3.56e-21!34;UBERON:0002791!1.03e-19!33;UBERON:0001869!2.48e-18!32;UBERON:0003056!2.59e-17!61;UBERON:0000025!1.70e-14!194;UBERON:0002308!4.38e-14!9;UBERON:0000125!4.38e-14!9;UBERON:0000033!6.02e-14!123;UBERON:0000153!7.41e-13!129;UBERON:0007811!7.41e-13!129;UBERON:0004111!7.87e-13!241;UBERON:0002619!1.11e-12!22;UBERON:0003076!2.16e-12!15;UBERON:0003057!2.16e-12!15;UBERON:0004121!7.89e-12!169;UBERON:0001950!8.13e-12!20;UBERON:0000924!2.59e-11!173;UBERON:0006601!2.59e-11!173;UBERON:0002420!4.38e-11!9;UBERON:0007245!4.38e-11!9;UBERON:0010009!4.38e-11!9;UBERON:0010011!4.38e-11!9;UBERON:0000454!4.38e-11!9;UBERON:0000956!7.44e-11!25;UBERON:0000203!7.44e-11!25;UBERON:0000481!1.04e-10!347;UBERON:0009663!1.44e-10!7;UBERON:0000062!2.93e-10!511;UBERON:0000477!8.26e-10!286;UBERON:0000483!1.38e-09!309;UBERON:0002368!2.05e-09!35;UBERON:0000119!2.33e-09!312;UBERON:0002298!4.54e-09!8;UBERON:0000200!1.03e-08!6;UBERON:0002107!1.25e-08!19;UBERON:0006925!1.25e-08!19;UBERON:0008836!1.25e-08!19;UBERON:0006947!4.12e-08!3;UBERON:0004054!4.12e-08!3;UBERON:0004733!7.04e-08!12;UBERON:0002028!7.04e-08!12;UBERON:0007277!7.04e-08!12;UBERON:0002530!8.53e-08!59;UBERON:0000949!8.91e-08!45;UBERON:0000475!1.35e-07!365;UBERON:0009497!1.40e-07!25;UBERON:0000015!1.40e-07!25;UBERON:0002423!1.40e-07!25;UBERON:0006235!1.40e-07!25;UBERON:0004161!1.40e-07!25;UBERON:0001894!2.42e-07!7;UBERON:0006222!2.42e-07!7;UBERON:0008835!3.46e-07!22;UBERON:0003894!3.46e-07!22;UBERON:0004732!3.46e-07!13;UBERON:0002240!4.65e-07!3;UBERON:0006331!4.65e-07!3;UBERON:0000988!5.39e-07!3;UBERON:0002771!6.66e-07!3;UBERON:0009854!8.59e-07!23;UBERON:0003929!9.11e-07!54 | |||
|ontology_enrichment_uberon_v019=UBERON:0005409;2.64e-15;22!UBERON:0006947;2.86e-14;3!UBERON:0004054;2.86e-14;3!UBERON:0000160;6.15e-14;17!UBERON:0002107;2.70e-13;19!UBERON:0006925;2.70e-13;19!UBERON:0001000;1.37e-11;1!UBERON:0005352;1.37e-11;1!UBERON:0001301;4.44e-11;1!UBERON:0005904;6.17e-11;4!UBERON:0002423;4.48e-10;25!UBERON:0004921;2.40e-09;33!UBERON:0002108;4.49e-09;4!UBERON:0000349;9.95e-09;5!UBERON:0002365;4.30e-08;31!UBERON:0002330;4.30e-08;31!UBERON:0001007;4.95e-08;81!UBERON:0002368;4.71e-07;33!UBERON:0000949;9.44e-07;43 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006947,3.17e-14,3;UBERON:0004054,3.17e-14,3;UBERON:0000160,5.82e-14,17;UBERON:0005409,1.59e-13,25;UBERON:0002107,2.60e-13,19;UBERON:0006925,2.60e-13,19;UBERON:0008836,2.60e-13,19;UBERON:0001000,1.45e-11,1;UBERON:0005352,1.45e-11,1;UBERON:0008835,1.76e-11,22;UBERON:0003894,1.76e-11,22;UBERON:0001301,4.91e-11,1;UBERON:0009854,5.62e-11,23;UBERON:0005904,6.65e-11,4;UBERON:0007499,4.35e-10,25;UBERON:0009497,4.35e-10,25;UBERON:0000015,4.35e-10,25;UBERON:0002423,4.35e-10,25;UBERON:0006235,4.35e-10,25;UBERON:0004161,4.35e-10,25;UBERON:0009856,1.08e-09,26;UBERON:0002108,4.32e-09,4;UBERON:0000349,1.12e-08,5;UBERON:0004921,1.29e-08,118;UBERON:0002365,4.18e-08,31;UBERON:0002330,4.18e-08,31;UBERON:0000949,1.03e-07,45;UBERON:0011216,1.46e-07,223;UBERON:0002368,3.70e-07,35 | |||
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|short_description=p11@SYBU | |||
}} |
Revision as of 03:07, 14 September 2013
Short description: | p11@SYBU |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_11_at_SYBU_5end |
Coexpression cluster: | C211_small_Hepatocyte_liver_colon_temporal_duodenum_kidney |
Association with transcript: | 0bp_to_ENST00000533394_5end |
EntrezGene: | SYBU |
HGNC: | 26011 |
UniProt: | E9PL50 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 3.77e-08 | 12 |
Ontology term | p-value | n |
---|---|---|
male genital duct | 3.17e-14 | 3 |
internal male genitalia | 3.17e-14 | 3 |
intestine | 5.82e-14 | 17 |
gastrointestinal system | 1.59e-13 | 25 |
liver | 2.60e-13 | 19 |
digestive gland | 2.60e-13 | 19 |
liver bud | 2.60e-13 | 19 |
vas deferens | 1.45e-11 | 1 |
spermatic cord | 1.45e-11 | 1 |
hepatic diverticulum | 1.76e-11 | 22 |
liver primordium | 1.76e-11 | 22 |
epididymis | 4.91e-11 | 1 |
digestive tract diverticulum | 5.62e-11 | 23 |
duct of male reproductive system | 6.65e-11 | 4 |
epithelial sac | 4.35e-10 | 25 |
epithelium of foregut-midgut junction | 4.35e-10 | 25 |
anatomical boundary | 4.35e-10 | 25 |
hepatobiliary system | 4.35e-10 | 25 |
foregut-midgut junction | 4.35e-10 | 25 |
septum transversum | 4.35e-10 | 25 |
sac | 1.08e-09 | 26 |
small intestine | 4.32e-09 | 4 |
limbic system | 1.12e-08 | 5 |
subdivision of digestive tract | 1.29e-08 | 118 |
exocrine gland | 4.18e-08 | 31 |
exocrine system | 4.18e-08 | 31 |
endocrine system | 1.03e-07 | 45 |
organ system subdivision | 1.46e-07 | 223 |
endocrine gland | 3.70e-07 | 35 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.