FFCP PHASE1:Mm9::chr3:96049453..96049469,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=15267,319192|HGNC=|MCL_coexpression_id=649|UniProt=Q6GSS7,B2RWH3|association_with_transcript=0bp_to_ENSMUST00000074976,NM_013549,uc008qmm.1_5end|description=CAGE_peak_1_at_Hist2h2aa1_5end,CAGE_peak_1_at_Hist2h2aa2_5end|id=chr3:96049453..96049469,+|ontology_enrichment_celltype=CL:0000063!3.65e-20!66;CL:0000988!8.08e-13!32;CL:0002032!8.08e-13!32;CL:0000037!8.08e-13!32;CL:0000566!8.08e-13!32;CL:0000837!8.08e-13!32;CL:0000144!6.66e-12!121;CL:0000012!6.66e-12!121;CL:0002371!1.14e-10!118;CL:0002320!1.81e-10!46;CL:0000134!1.81e-10!46;CL:0002031!9.37e-10!25;CL:0000548!2.77e-09!115;CL:0000004!2.77e-09!115;CL:0000255!2.77e-09!115;CL:0000219!5.49e-09!54;CL:0002076!1.36e-08!15;CL:0000049!1.79e-08!19;CL:0000066!3.10e-08!25|ontology_enrichment_celltype_v019_2=CL:0000988,4.67e-21,32;CL:0002032,4.67e-21,32;CL:0000037,4.67e-21,32;CL:0000837,4.67e-21,32;CL:0002320,2.30e-17,46;CL:0000134,2.30e-17,46;CL:0002031,4.79e-17,25;CL:0000219,1.26e-15,54;CL:0000066,6.71e-15,25;CL:0000049,1.66e-14,19;CL:0002076,2.01e-14,15;CL:0000034,2.31e-13,97;CL:0000223,3.43e-11,20;CL:0000763,4.44e-11,16;CL:0000050,1.02e-10,9;CL:0000839,9.59e-10,13;CL:0000723,1.17e-09,91;CL:0000048,1.17e-09,91;CL:0002563,4.60e-09,9;CL:0002251,4.60e-09,9;CL:0000838,1.49e-08,12;CL:0000542,1.08e-07,13;CL:0000051,1.08e-07,13;CL:0000553,1.12e-07,6;CL:0000556,1.12e-07,6;CL:0000738,1.22e-07,17;CL:0002087,1.22e-07,17;CL:0000084,1.41e-07,11;CL:0000827,1.41e-07,11;CL:0000791,1.91e-07,9;CL:0000789,1.91e-07,9;CL:0002420,1.91e-07,9;CL:0002419,1.91e-07,9;CL:0000790,1.91e-07,9;CL:0000075,3.69e-07,7;CL:0000624,9.63e-07,8|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=DOID:0050686,3.69e-08,6|ontology_enrichment_uberon=UBERON:0002193!8.27e-11!48;UBERON:0002384!1.81e-10!46;UBERON:0002390!1.02e-09!45;UBERON:0003061!1.02e-09!45;UBERON:0002405!6.88e-09!70;UBERON:0000344!3.47e-07!15;UBERON:0003929!3.53e-07!55;UBERON:0000490!3.54e-07!66;UBERON:0000072!3.69e-07!27|ontology_enrichment_uberon_v019_2=UBERON:0002384,2.30e-17,46;UBERON:0000344,1.06e-12,15;UBERON:0001242,1.15e-10,13;UBERON:0001262,1.15e-10,13;UBERON:0004786,1.15e-10,13;UBERON:0000485,2.62e-10,11;UBERON:0004923,1.80e-09,24;UBERON:0002193,3.25e-09,48;UBERON:0002405,3.25e-09,48;UBERON:0003350,4.60e-09,9;UBERON:0004808,4.60e-09,9;UBERON:0001277,4.60e-09,9;UBERON:0002390,3.68e-08,45;UBERON:0003061,3.68e-08,45|phase1_expression=35.2327463630547,38.0383194326904,44.5899254601745,79.2456233623895,119.213183727231,78.0638614390288,181.283409102128,58.492865519034,17.4578015468067,21.2998718953014,24.8266053926982,11.6467352133191,57.8658467167475,43.7102012094987,1.99865857089398,1034.64861636201,1920.99691733989,116.40553901719,100.230650965795,330.599538750666,0.17008658030214,0.595745707205312,220.452622033261,123.834135242097,155.310083282474,69.4820676579174,88.3062092126103,60.3319451520489,138.147025944784,80.6496415231778,96.0093111137469,1212.27355563444,12.3012957516914,507.141379249404,67.0135757822957,123.678576146718,70.8467666230421,179.550069586133,524.27601617547,243.438540947816,151.175492423971,230.869373915955,190.805568741243,0,0,0.183546752161682,0,0.218025156380447,0,0.388859798148567,0.139986421625363,0,147.48091072475,67.458679207055,51.7584450679395,0.257259436035947,0,0,0.202316460859598,0,1.26766280701236,0,0,0.899899717281399,0,0.7104801149461,0,0,0.414758449233911,0,0.420649922702764,0.571301968807607,0,0.857435594504678,0.575072826109418,0,0,0.127687338085188,0,0,0.182975287204819,0,0,0,0.15279824777681,0,0.142371680799103,0.186399445825301,47.32887083324,78.6699940711637,59.1323556951423,104.971712991729,0.679971333707751,0,0,0,0.140444420131752,0.340860645156116,151.19545467887,146.989262996302,35.6333852035002,73.1460921261612,43.3168907501298,21.3320010945999,174.275288014027,163.670473096914,185.021946875411,0,0.517875767294343,0,0.173485326766136,0,0,0.150722640552623,0,0.125666591329675,0,0,0,0,0.441683036920787,0.969750506270444,0,0,0,0.255457055208591,185.353997610659,691.087946104406,224.660161465178,0.149790639404823,0,0,0,0,0,0.162241263067758,0.305518091550949,0.746441823660558,0,0,0,0.459804208866946,0.900310649026746,0,0.544291993210623,0.12811372028485,0.187403449119458,0,0,0.189106080167819,0.351902248327898,0.876782929710299,0.556094498451196,0,0.205782136407943,0.199034266818493,242.263549623066,584.694444964633,0.852490498186778,0.828503090142008,0.234526059981096,0,0.473489471170421,0,0.154267112887378,0.697601834251224,0,0.116765342367169,0,0,0.0810688095458557,0,0,0.134206418760372,0.210289948564127,0,0,0.264450566663544,0.213288250535234,0.232236671860439,0.128867461322093,0.80673409849337,0.444756087689741,0.190225626112559,0,0.329397909448022,0.251335208800269,0,0,0.898819408654221,0,0,0.189667900953082,0.342745537829186,2.25415471346161,0.203651327845314,0,0.350679099451593,0,0,0,0.123397163921801,0,0.667380422864376,0.982794975566015,0.449724224769707,1.21716072833102,0,1.01850340712568,0.863088412352432,0.810676133875177,0.823684239564244,0,0,0.31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| ||
|EntrezGene=15267,319192 | |||
|HGNC= | |||
|MCL_coexpression_id=649 | |||
|UniProt=Q6GSS7,B2RWH3 | |||
|association_with_transcript=0bp_to_ENSMUST00000074976,NM_013549,uc008qmm.1_5end | |||
|description=CAGE_peak_1_at_Hist2h2aa1_5end,CAGE_peak_1_at_Hist2h2aa2_5end | |||
|id=chr3:96049453..96049469,+ | |||
|ontology_enrichment_celltype=CL:0000063!3.65e-20!66;CL:0000988!8.08e-13!32;CL:0002032!8.08e-13!32;CL:0000037!8.08e-13!32;CL:0000566!8.08e-13!32;CL:0000837!8.08e-13!32;CL:0000144!6.66e-12!121;CL:0000012!6.66e-12!121;CL:0002371!1.14e-10!118;CL:0002320!1.81e-10!46;CL:0000134!1.81e-10!46;CL:0002031!9.37e-10!25;CL:0000548!2.77e-09!115;CL:0000004!2.77e-09!115;CL:0000255!2.77e-09!115;CL:0000219!5.49e-09!54;CL:0002076!1.36e-08!15;CL:0000049!1.79e-08!19;CL:0000066!3.10e-08!25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,4.67e-21,32;CL:0002032,4.67e-21,32;CL:0000037,4.67e-21,32;CL:0000837,4.67e-21,32;CL:0002320,2.30e-17,46;CL:0000134,2.30e-17,46;CL:0002031,4.79e-17,25;CL:0000219,1.26e-15,54;CL:0000066,6.71e-15,25;CL:0000049,1.66e-14,19;CL:0002076,2.01e-14,15;CL:0000034,2.31e-13,97;CL:0000223,3.43e-11,20;CL:0000763,4.44e-11,16;CL:0000050,1.02e-10,9;CL:0000839,9.59e-10,13;CL:0000723,1.17e-09,91;CL:0000048,1.17e-09,91;CL:0002563,4.60e-09,9;CL:0002251,4.60e-09,9;CL:0000838,1.49e-08,12;CL:0000542,1.08e-07,13;CL:0000051,1.08e-07,13;CL:0000553,1.12e-07,6;CL:0000556,1.12e-07,6;CL:0000738,1.22e-07,17;CL:0002087,1.22e-07,17;CL:0000084,1.41e-07,11;CL:0000827,1.41e-07,11;CL:0000791,1.91e-07,9;CL:0000789,1.91e-07,9;CL:0002420,1.91e-07,9;CL:0002419,1.91e-07,9;CL:0000790,1.91e-07,9;CL:0000075,3.69e-07,7;CL:0000624,9.63e-07,8 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2=DOID:0050686,3.69e-08,6 | |||
|ontology_enrichment_uberon=UBERON:0002193!8.27e-11!48;UBERON:0002384!1.81e-10!46;UBERON:0002390!1.02e-09!45;UBERON:0003061!1.02e-09!45;UBERON:0002405!6.88e-09!70;UBERON:0000344!3.47e-07!15;UBERON:0003929!3.53e-07!55;UBERON:0000490!3.54e-07!66;UBERON:0000072!3.69e-07!27 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,2.30e-17,46;UBERON:0000344,1.06e-12,15;UBERON:0001242,1.15e-10,13;UBERON:0001262,1.15e-10,13;UBERON:0004786,1.15e-10,13;UBERON:0000485,2.62e-10,11;UBERON:0004923,1.80e-09,24;UBERON:0002193,3.25e-09,48;UBERON:0002405,3.25e-09,48;UBERON:0003350,4.60e-09,9;UBERON:0004808,4.60e-09,9;UBERON:0001277,4.60e-09,9;UBERON:0002390,3.68e-08,45;UBERON:0003061,3.68e-08,45 | |||
|phase1_expression=35.2327463630547,38.0383194326904,44.5899254601745,79.2456233623895,119.213183727231,78.0638614390288,181.283409102128,58.492865519034,17.4578015468067,21.2998718953014,24.8266053926982,11.6467352133191,57.8658467167475,43.7102012094987,1.99865857089398,1034.64861636201,1920.99691733989,116.40553901719,100.230650965795,330.599538750666,0.17008658030214,0.595745707205312,220.452622033261,123.834135242097,155.310083282474,69.4820676579174,88.3062092126103,60.3319451520489,138.147025944784,80.6496415231778,96.0093111137469,1212.27355563444,12.3012957516914,507.141379249404,67.0135757822957,123.678576146718,70.8467666230421,179.550069586133,524.27601617547,243.438540947816,151.175492423971,230.869373915955,190.805568741243,0,0,0.183546752161682,0,0.218025156380447,0,0.388859798148567,0.139986421625363,0,147.48091072475,67.458679207055,51.7584450679395,0.257259436035947,0,0,0.202316460859598,0,1.26766280701236,0,0,0.899899717281399,0,0.7104801149461,0,0,0.414758449233911,0,0.420649922702764,0.571301968807607,0,0.857435594504678,0.575072826109418,0,0,0.127687338085188,0,0,0.182975287204819,0,0,0,0.15279824777681,0,0.142371680799103,0.186399445825301,47.32887083324,78.6699940711637,59.1323556951423,104.971712991729,0.679971333707751,0,0,0,0.140444420131752,0.340860645156116,151.19545467887,146.989262996302,35.6333852035002,73.1460921261612,43.3168907501298,21.3320010945999,174.275288014027,163.670473096914,185.021946875411,0,0.517875767294343,0,0.173485326766136,0,0,0.150722640552623,0,0.125666591329675,0,0,0,0,0.441683036920787,0.969750506270444,0,0,0,0.255457055208591,185.353997610659,691.087946104406,224.660161465178,0.149790639404823,0,0,0,0,0,0.162241263067758,0.305518091550949,0.746441823660558,0,0,0,0.459804208866946,0.900310649026746,0,0.544291993210623,0.12811372028485,0.187403449119458,0,0,0.189106080167819,0.351902248327898,0.876782929710299,0.556094498451196,0,0.205782136407943,0.199034266818493,242.263549623066,584.694444964633,0.852490498186778,0.828503090142008,0.234526059981096,0,0.473489471170421,0,0.154267112887378,0.697601834251224,0,0.116765342367169,0,0,0.0810688095458557,0,0,0.134206418760372,0.210289948564127,0,0,0.264450566663544,0.213288250535234,0.232236671860439,0.128867461322093,0.80673409849337,0.444756087689741,0.190225626112559,0,0.329397909448022,0.251335208800269,0,0,0.898819408654221,0,0,0.189667900953082,0.342745537829186,2.25415471346161,0.203651327845314,0,0.350679099451593,0,0,0,0.123397163921801,0,0.667380422864376,0.982794975566015,0.449724224769707,1.21716072833102,0,1.01850340712568,0.863088412352432,0.810676133875177,0.823684239564244,0,0,0.312037673114561,0.252578877947112,0.358794827043824,0,0,0.757965647081939,0.488894929326078,0.339490171550376,0.234690248288502,0.335012514883631,0.238043640886014,0.195133647857799,0.315270288212382,0.221464689648775,0,0.163863314715738,0,0.144649058581512,58.8086007363162,45.6880774407716,0,0.275936746304732,0,0.117211686592203,0.327869890753351,0,0.94652465824877,0.390438744296638,0.215423397732799,0,0,0.283076530788832,0,0.292255857911312,0,0.963963949265421,0,0.534196811001766,0.162886959353576,0.164970122972535,0,0.485561272309963,0,0.188605079755898,0.590603785761546,0,0,0,0,0,0,0,0.680879211507576,0.540183282093931,0.388076051348264,0.428674070063185,0,0,0.164549020602121,1.522324745573,0.23467170806371,0,0,0.32977250588296,0,0.241251699712623,0.477489376012546,0.328281799490123,0.582961673259701,0,1.70870880797853,0.206386867963223,0,1.50694765603753,0.410082683163076,1.83022538565218,79.3799268071304,85.930191726726,102.820780510491,0.954670618015114,0.316335993581135,0.813277868507395,0,0.627264888043406,0,0.134864346384821,0.330613822901344,0,0.129614973291793,0.621339313086926,0,0.299033092087958,0.330916980914195,0.583353565032143,0.258319646955462,0,0.352071715937262,0.13020438484395,0.314578033277133,0,0.576060012515731,0.948033361884535,0.608175645870493,0.513554785824136,0.51968329191118,1.9692936523423,0.79472541912506,0.600977247599844,0.738447635872886,1.11063094942962,0.762068066549998,0.907435666231565,1.07203668813728,0.769694733122636,0.116876902181569,0,129.41781081708,101.376657968708,104.088462145729,0,0,0.183151624267265,0.214368379079066,0,0,0,0,13.2326950404639,0,0,0,0,0.453142408984205,0,0.415149390336707,0,0.512200817262403,0.243106717068294,1.04806581313991,0.551530525350042,0.44449345560323,0.412070114477788,0.320919209591815,0,0,0,0.0936415074698824,0,0.17230640686684,0,0.463537303779422,0.38581844092741,0,0.735994600671987,0,0.354951612318675,0.476872379894642,0,0.188218760830661,0.25384382367503,0,0.526139422875686,0.135804113845862,0.561142271657738,0.830445126869219,0,1.22769312950907,0.309873682371932,0,0,0,0,0,0,0.231867835620421 | |||
|short_description=p1@Hist2h2aa1,p1@Hist2h2aa2 | |||
}} |
Revision as of 03:08, 14 September 2013
Short description: | p1@Hist2h2aa1, p1@Hist2h2aa2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Hist2h2aa1_5end, CAGE_peak_1_at_Hist2h2aa2_5end |
Coexpression cluster: | MCL_coexpression_mm9:649 |
Association with transcript: | 0bp_to_ENSMUST00000074976, NM_013549, uc008qmm.1_5end |
EntrezGene: | 15267,319192 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
connective tissue | 2.30e-17 | 46 |
mucosa | 1.06e-12 | 15 |
intestinal mucosa | 1.15e-10 | 13 |
wall of intestine | 1.15e-10 | 13 |
gastrointestinal system mucosa | 1.15e-10 | 13 |
simple columnar epithelium | 2.62e-10 | 11 |
organ component layer | 1.80e-09 | 24 |
hemolymphoid system | 3.25e-09 | 48 |
immune system | 3.25e-09 | 48 |
epithelium of mucosa | 4.60e-09 | 9 |
gastrointestinal system epithelium | 4.60e-09 | 9 |
intestinal epithelium | 4.60e-09 | 9 |
hematopoietic system | 3.68e-08 | 45 |
blood island | 3.68e-08 | 45 |
Ontology term | p-value | n |
---|---|---|
organ system cancer | 3.69e-08 | 6 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.