FFCP PHASE1:Mm9::chr4:119331511..119331527,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=14916|HGNC=|MCL_coexpression_id=1198|UniProt=O09051,Q9QUQ3|association_with_transcript=22bp_to_NM_008191,uc012dkg.1_5end|description=CAGE_peak_1_at_Guca2b_5end|id=chr4:119331511..119331527,-|ontology_enrichment_celltype=CL:0002563!3.26e-08!9;CL:0002251!3.26e-08!9;CL:0000239!9.19e-07!6;CL:0000677!9.19e-07!6;CL:0000212!9.19e-07!6;CL:0000584!9.19e-07!6|ontology_enrichment_celltype_v019_2=CL:0002563,1.53e-09,9;CL:0002251,1.53e-09,9;CL:0000239,8.33e-08,6;CL:0000677,8.33e-08,6;CL:0000584,8.33e-08,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!1.06e-18!43;UBERON:0005409!9.22e-17!59;UBERON:0000344!1.61e-13!15;UBERON:0001242!1.19e-11!13;UBERON:0000060!1.19e-11!13;UBERON:0001262!1.19e-11!13;UBERON:0004786!1.19e-11!13;UBERON:0004923!1.78e-09!24;UBERON:0003350!3.26e-08!9;UBERON:0004808!3.26e-08!9;UBERON:0001277!3.26e-08!9|ontology_enrichment_uberon_v019_2=UBERON:0000160,6.45e-26,31;UBERON:0005409,3.94e-21,47;UBERON:0000344,6.65e-16,15;UBERON:0001242,1.16e-13,13;UBERON:0001262,1.16e-13,13;UBERON:0004786,1.16e-13,13;UBERON:0004923,1.01e-11,24;UBERON:0003350,1.53e-09,9;UBERON:0004808,1.53e-09,9;UBERON:0001277,1.53e-09,9;UBERON:0000485,2.53e-07,11|phase1_expression=0,9622.99686565538,11225.7412342186,2570.64333189675,4309.70686045837,1375.43487477411,1566.6063678336,0,0,0,0,0,0,0,0,0,0,0,0,0,78.4949568094374,0,0,4962.96495505148,6556.74666218079,10971.8501383457,8134.94029746413,5588.46189094122,2214.91297718349,1999.35501938553,3095.57965925871,0,0,0,16.7533939455739,78.6289872545669,26.542016314108,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182975287204819,0,0,0,0,0,0,0,0.530083353332288,0,0,0,0,0,0,0,216.705740263293,0,0,0,0,0,0,0,0,0,0,956.289992647127,0,0,0,0,0.230615497256059,0,0,2.76466500925286,34.1129055473436,0,0,0,0,0,27.9587641827183,0,0,2122.59267172819,0,0,0,0,0,0,0,0,0,0,0,0.497627882440372,0.252722758433675,0,0,0,0,0,0,0,0,0,0,0.189106080167819,0.351902248327898,0,0,0,0,0,0,0,0,0,1.40715635988658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3762.80910061949,4519.9890854133,0.213288250535234,0.232236671860439,6.95884291139304,74.0178535367667,270.856457403052,714.677677304885,1839.27464254653,1622.9434998504,918.378852956185,1020.24878862702,906.38804101679,1523.49889766891,2146.89924940534,3104.21416748908,0.569003702859245,0.342745537829186,1.1270773567308,5.90588850751411,5.81857461502877,10.3801013437671,2.59269802209455,70.4100405862702,324.202372992439,402.521548712913,0,0,0,0,0,0.241177159752417,2.80088436959562,0.575392274901621,0.162135226775035,0,0,0.744281895337007,0,0,0,0,0,0,0,0,0,0,0,0.390267295715598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.6968616189571,0.534196811001766,0,16.6619824202261,0,0.485561272309963,0.604647113929502,0.377210159511796,0.590603785761546,0,244.731593630305,0,0,0,0,0,0,0,0,0,0,0,0,0,59.6066138481824,16.522901527378,0,0,0,0,0,0,1501.41778948036,0,0,0,0,0,0,0,0,0,0,0,0,0.609958401380546,2.70013352054503,1.46361807210128,31.2258466157034,1.61837215661785,2.23164330458407,1.04702376793612,35.644117655243,0,0,0,0,0,0,0,0,0,0,0,0.288030006257865,1.58005560314089,0,0,0,0,0,0.480781798079875,0.295379054349154,0.302899349844443,0.304827226619999,0.201652370273681,1.07203668813728,1.05833025804362,1.05189211963412,0,0,0,0,0,25465.8843640691,5.49454872801795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209613162627982,4.59608771125035,29.3365680698132,28.6388729562063,39.4730627797933,27.0386016587263,36.5010191841945,28.1053248665254,23.4103768674706,25.8021364191623,25.7310900921147,20.9569224164552,23.292749514916,18.326375944052,29.2580989570348,25.1710153429819,27.7724094432186,23.4268064130325,25.7511085143107,28.1972048266717,21.927485636772,22.5921003070776,27.0733399851703,26.5700408552221,24.4447404922551,16.2731258780744,20.405223117358,17.3367888980992,22.5077073743329,23.5503998602668,17.5545015992839,0,36.0254677005929,60.5936372416201,0.382576664137687,0.441182838239031,0|short_description=p1@Guca2b}} | ||
|EntrezGene=14916 | |||
|HGNC= | |||
|MCL_coexpression_id=1198 | |||
|UniProt=O09051,Q9QUQ3 | |||
|association_with_transcript=22bp_to_NM_008191,uc012dkg.1_5end | |||
|description=CAGE_peak_1_at_Guca2b_5end | |||
|id=chr4:119331511..119331527,- | |||
|ontology_enrichment_celltype=CL:0002563!3.26e-08!9;CL:0002251!3.26e-08!9;CL:0000239!9.19e-07!6;CL:0000677!9.19e-07!6;CL:0000212!9.19e-07!6;CL:0000584!9.19e-07!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,1.53e-09,9;CL:0002251,1.53e-09,9;CL:0000239,8.33e-08,6;CL:0000677,8.33e-08,6;CL:0000584,8.33e-08,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!1.06e-18!43;UBERON:0005409!9.22e-17!59;UBERON:0000344!1.61e-13!15;UBERON:0001242!1.19e-11!13;UBERON:0000060!1.19e-11!13;UBERON:0001262!1.19e-11!13;UBERON:0004786!1.19e-11!13;UBERON:0004923!1.78e-09!24;UBERON:0003350!3.26e-08!9;UBERON:0004808!3.26e-08!9;UBERON:0001277!3.26e-08!9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,6.45e-26,31;UBERON:0005409,3.94e-21,47;UBERON:0000344,6.65e-16,15;UBERON:0001242,1.16e-13,13;UBERON:0001262,1.16e-13,13;UBERON:0004786,1.16e-13,13;UBERON:0004923,1.01e-11,24;UBERON:0003350,1.53e-09,9;UBERON:0004808,1.53e-09,9;UBERON:0001277,1.53e-09,9;UBERON:0000485,2.53e-07,11 | |||
|phase1_expression=0,9622.99686565538,11225.7412342186,2570.64333189675,4309.70686045837,1375.43487477411,1566.6063678336,0,0,0,0,0,0,0,0,0,0,0,0,0,78.4949568094374,0,0,4962.96495505148,6556.74666218079,10971.8501383457,8134.94029746413,5588.46189094122,2214.91297718349,1999.35501938553,3095.57965925871,0,0,0,16.7533939455739,78.6289872545669,26.542016314108,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182975287204819,0,0,0,0,0,0,0,0.530083353332288,0,0,0,0,0,0,0,216.705740263293,0,0,0,0,0,0,0,0,0,0,956.289992647127,0,0,0,0,0.230615497256059,0,0,2.76466500925286,34.1129055473436,0,0,0,0,0,27.9587641827183,0,0,2122.59267172819,0,0,0,0,0,0,0,0,0,0,0,0.497627882440372,0.252722758433675,0,0,0,0,0,0,0,0,0,0,0.189106080167819,0.351902248327898,0,0,0,0,0,0,0,0,0,1.40715635988658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3762.80910061949,4519.9890854133,0.213288250535234,0.232236671860439,6.95884291139304,74.0178535367667,270.856457403052,714.677677304885,1839.27464254653,1622.9434998504,918.378852956185,1020.24878862702,906.38804101679,1523.49889766891,2146.89924940534,3104.21416748908,0.569003702859245,0.342745537829186,1.1270773567308,5.90588850751411,5.81857461502877,10.3801013437671,2.59269802209455,70.4100405862702,324.202372992439,402.521548712913,0,0,0,0,0,0.241177159752417,2.80088436959562,0.575392274901621,0.162135226775035,0,0,0.744281895337007,0,0,0,0,0,0,0,0,0,0,0,0.390267295715598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.6968616189571,0.534196811001766,0,16.6619824202261,0,0.485561272309963,0.604647113929502,0.377210159511796,0.590603785761546,0,244.731593630305,0,0,0,0,0,0,0,0,0,0,0,0,0,59.6066138481824,16.522901527378,0,0,0,0,0,0,1501.41778948036,0,0,0,0,0,0,0,0,0,0,0,0,0.609958401380546,2.70013352054503,1.46361807210128,31.2258466157034,1.61837215661785,2.23164330458407,1.04702376793612,35.644117655243,0,0,0,0,0,0,0,0,0,0,0,0.288030006257865,1.58005560314089,0,0,0,0,0,0.480781798079875,0.295379054349154,0.302899349844443,0.304827226619999,0.201652370273681,1.07203668813728,1.05833025804362,1.05189211963412,0,0,0,0,0,25465.8843640691,5.49454872801795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209613162627982,4.59608771125035,29.3365680698132,28.6388729562063,39.4730627797933,27.0386016587263,36.5010191841945,28.1053248665254,23.4103768674706,25.8021364191623,25.7310900921147,20.9569224164552,23.292749514916,18.326375944052,29.2580989570348,25.1710153429819,27.7724094432186,23.4268064130325,25.7511085143107,28.1972048266717,21.927485636772,22.5921003070776,27.0733399851703,26.5700408552221,24.4447404922551,16.2731258780744,20.405223117358,17.3367888980992,22.5077073743329,23.5503998602668,17.5545015992839,0,36.0254677005929,60.5936372416201,0.382576664137687,0.441182838239031,0 | |||
|short_description=p1@Guca2b | |||
}} |
Revision as of 03:38, 14 September 2013
Short description: | p1@Guca2b |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Guca2b_5end |
Coexpression cluster: | MCL_coexpression_mm9:1198 |
Association with transcript: | 22bp_to_NM_008191, uc012dkg.1_5end |
EntrezGene: | Guca2b |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 1.53e-09 | 9 |
epithelial cell of alimentary canal | 1.53e-09 | 9 |
brush border epithelial cell | 8.33e-08 | 6 |
gut absorptive cell | 8.33e-08 | 6 |
enterocyte | 8.33e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
intestine | 6.45e-26 | 31 |
gastrointestinal system | 3.94e-21 | 47 |
mucosa | 6.65e-16 | 15 |
intestinal mucosa | 1.16e-13 | 13 |
wall of intestine | 1.16e-13 | 13 |
gastrointestinal system mucosa | 1.16e-13 | 13 |
organ component layer | 1.01e-11 | 24 |
epithelium of mucosa | 1.53e-09 | 9 |
gastrointestinal system epithelium | 1.53e-09 | 9 |
intestinal epithelium | 1.53e-09 | 9 |
simple columnar epithelium | 2.53e-07 | 11 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.