FFCP PHASE1:Mm9::chr4:141264317..141264329,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=62|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr4:141264317..141264329,-|id=chr4:141264317..141264329,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0001155,1.14e-15,2;UBERON:0000059,1.14e-15,2;UBERON:0009854,2.84e-11,23;UBERON:0009856,2.84e-11,23;UBERON:0001153,1.05e-08,1;UBERON:0001045,1.05e-08,1;UBERON:0002107,2.40e-08,22;UBERON:0007499,2.40e-08,22;UBERON:0006925,2.40e-08,22;UBERON:0009497,2.40e-08,22;UBERON:0000015,2.40e-08,22;UBERON:0002423,2.40e-08,22;UBERON:0006235,2.40e-08,22;UBERON:0008835,2.40e-08,22;UBERON:0003894,2.40e-08,22;UBERON:0004161,2.40e-08,22;UBERON:0008836,2.40e-08,22;UBERON:0002365,2.44e-07,25;UBERON:0002330,2.44e-07,25|phase1_expression=0,0,0.454999239389536,0,0,0,0,0,0.140788722151667,0.234064526321993,0.171217968225505,0.239316476986009,0,0.0874204024189974,0,0,0.699561878128147,0.630924330716475,0.274228867211478,0,0.0850432901510698,0.198581902401771,0,0.319984845586813,0,0,0,0,0,0,0,0,0,0,0,0.166234645358492,0,0,0.7813353445238,0,0,0,0,0,0.304130793658544,0,0,0.218025156380447,0,0,0,0,0.167782606057736,0,0,0.514518872071894,0.85960031981627,0,0,0,0,0,0,0,0.988866362566974,0,0,0,0,0,0,0.285650984403804,0.220868540951614,0,0,0,0,0.127687338085188,0.153606533256243,0.131886287730194,0.182975287204819,0.52091337055676,0,0,0.15279824777681,0,0.284743361598206,0.186399445825301,0.227178579999552,0.0755715601067855,0.289864488701678,0,0.679971333707751,1.07940638327563,0,0.448026887097336,0.561777680527007,0.340860645156116,0,0,0,0,0,0,0.432982082022428,0,0,1.25602267690966,0,0,0.346970653532272,0,0,0.60289056221049,0.23517741427141,0,0.494389935468748,0,0.884610551949874,0,0,0,1.86391761218122,0.292780797011547,0.41889341362691,1.78819938646014,0.11981512450592,0.599902730993408,0,0,0,0,0,0.255715457330331,0,0,0,0.373220911830279,0.252722758433675,0.841767423545896,0.260240885925407,0,0,0,0,0.12811372028485,0,0,0,0.189106080167819,0.175951124163949,0.43839146485515,0.556094498451196,0.348252166522167,0,0,0,0,0,0,0,0,0,0,0,0.465067889500816,0,0,0,0.164167464079095,0.0810688095458557,0,0,0.134206418760372,0,0.102904612379284,0.991256348951394,0,0,0,0,0,0.22237804384487,0,2.84717436926707,0.329397909448022,0.251335208800269,0.596869416123452,0.58489226135736,2.69645822596266,0.432276099749388,0.995706366271836,0.379335801906163,0,0,0,0.193952487167626,0.210407459670956,0.252946148497029,0.147610147979602,0,0.246794327843601,0.296452627087149,0.166845105716094,0,0.224862112384854,0.405720242777006,0,1.01850340712568,0.287696137450811,12.8086829152278,0.549122826376163,1.43768206527355,0.744281895337007,0.624075346229121,0.252578877947112,0.179397413521912,3.85954817090694,0,0.568474235311454,0.162964976442026,0,0.234690248288502,0.167506257441816,0.238043640886014,0.585400943573396,0,0,0.159454768657487,0.163863314715738,0,0,0,0,0.491764273019036,0.551873492609465,0,0,0,0.252470927204373,0,0,0,0,0.222798674082394,0.283076530788832,0.404810701674894,0.292255857911312,0,0,0.283880170416537,0.35613120733451,0.325773918707152,0.329940245945071,1.32745138339963,0,0.302323556964751,0.188605079755898,0,0,0.258428293168221,0.727067458955011,0.356497378384721,0.316036757935816,0,0,0,0,0.258717367565509,0,0.177340233642274,0.178368817602071,0.164549020602121,0.304464949114599,0,0.42366414172764,0.220528398054962,0.32977250588296,0.807322133479528,0.180938774784468,0.238744688006273,0,5.24665505933731,0,0.854354403989263,0.206386867963223,0.185194527369712,0.753473828018764,0.410082683163076,0.686334519619568,0,0.139951452323658,0,0.954670618015114,0.474503990371703,0,0.216010681643603,0.209088296014469,0,0,0.247960367176008,0,0.129614973291793,0,0,0.149516546043979,0.165458490457098,0.194451188344048,0,0,0.117357238645754,0,0.419437377702843,0,0,0.632022241256357,0.405450430580328,0.102710957164827,0.129920822977795,0,0.39736270956253,0.240390899039938,0.147689527174577,0.201932899896295,0,0.201652370273681,0.194915761479505,0.0962118416403295,0.116876902181569,0,0,0.0897138566094757,0.167884616364078,0.19318959403219,0,0.36630324853453,0,0.501572104035363,0.564751842617067,0,0,0,0,0,0,0.45032120322422,0.453142408984205,0,0,0.399024873401031,0.170733605754134,0.243106717068294,0,0,0.222246727801615,0,0,0,0.25347929989024,0.188626341386076,0,0.128050304809739,0.114870937911227,0,0,0.192909220463705,0.412085900803307,0.147198920134397,0,0,0,0,0,0,0,0,0.135804113845862,0,0,0,0,0,0,0.749431733813838,0,0.859484216193193,0,0.661774257358546,0|short_description=p@chr4:141264317..141264329,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=62 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr4:141264317..141264329,- | |||
|id=chr4:141264317..141264329,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001155,1.14e-15,2;UBERON:0000059,1.14e-15,2;UBERON:0009854,2.84e-11,23;UBERON:0009856,2.84e-11,23;UBERON:0001153,1.05e-08,1;UBERON:0001045,1.05e-08,1;UBERON:0002107,2.40e-08,22;UBERON:0007499,2.40e-08,22;UBERON:0006925,2.40e-08,22;UBERON:0009497,2.40e-08,22;UBERON:0000015,2.40e-08,22;UBERON:0002423,2.40e-08,22;UBERON:0006235,2.40e-08,22;UBERON:0008835,2.40e-08,22;UBERON:0003894,2.40e-08,22;UBERON:0004161,2.40e-08,22;UBERON:0008836,2.40e-08,22;UBERON:0002365,2.44e-07,25;UBERON:0002330,2.44e-07,25 | |||
|phase1_expression=0,0,0.454999239389536,0,0,0,0,0,0.140788722151667,0.234064526321993,0.171217968225505,0.239316476986009,0,0.0874204024189974,0,0,0.699561878128147,0.630924330716475,0.274228867211478,0,0.0850432901510698,0.198581902401771,0,0.319984845586813,0,0,0,0,0,0,0,0,0,0,0,0.166234645358492,0,0,0.7813353445238,0,0,0,0,0,0.304130793658544,0,0,0.218025156380447,0,0,0,0,0.167782606057736,0,0,0.514518872071894,0.85960031981627,0,0,0,0,0,0,0,0.988866362566974,0,0,0,0,0,0,0.285650984403804,0.220868540951614,0,0,0,0,0.127687338085188,0.153606533256243,0.131886287730194,0.182975287204819,0.52091337055676,0,0,0.15279824777681,0,0.284743361598206,0.186399445825301,0.227178579999552,0.0755715601067855,0.289864488701678,0,0.679971333707751,1.07940638327563,0,0.448026887097336,0.561777680527007,0.340860645156116,0,0,0,0,0,0,0.432982082022428,0,0,1.25602267690966,0,0,0.346970653532272,0,0,0.60289056221049,0.23517741427141,0,0.494389935468748,0,0.884610551949874,0,0,0,1.86391761218122,0.292780797011547,0.41889341362691,1.78819938646014,0.11981512450592,0.599902730993408,0,0,0,0,0,0.255715457330331,0,0,0,0.373220911830279,0.252722758433675,0.841767423545896,0.260240885925407,0,0,0,0,0.12811372028485,0,0,0,0.189106080167819,0.175951124163949,0.43839146485515,0.556094498451196,0.348252166522167,0,0,0,0,0,0,0,0,0,0,0,0.465067889500816,0,0,0,0.164167464079095,0.0810688095458557,0,0,0.134206418760372,0,0.102904612379284,0.991256348951394,0,0,0,0,0,0.22237804384487,0,2.84717436926707,0.329397909448022,0.251335208800269,0.596869416123452,0.58489226135736,2.69645822596266,0.432276099749388,0.995706366271836,0.379335801906163,0,0,0,0.193952487167626,0.210407459670956,0.252946148497029,0.147610147979602,0,0.246794327843601,0.296452627087149,0.166845105716094,0,0.224862112384854,0.405720242777006,0,1.01850340712568,0.287696137450811,12.8086829152278,0.549122826376163,1.43768206527355,0.744281895337007,0.624075346229121,0.252578877947112,0.179397413521912,3.85954817090694,0,0.568474235311454,0.162964976442026,0,0.234690248288502,0.167506257441816,0.238043640886014,0.585400943573396,0,0,0.159454768657487,0.163863314715738,0,0,0,0,0.491764273019036,0.551873492609465,0,0,0,0.252470927204373,0,0,0,0,0.222798674082394,0.283076530788832,0.404810701674894,0.292255857911312,0,0,0.283880170416537,0.35613120733451,0.325773918707152,0.329940245945071,1.32745138339963,0,0.302323556964751,0.188605079755898,0,0,0.258428293168221,0.727067458955011,0.356497378384721,0.316036757935816,0,0,0,0,0.258717367565509,0,0.177340233642274,0.178368817602071,0.164549020602121,0.304464949114599,0,0.42366414172764,0.220528398054962,0.32977250588296,0.807322133479528,0.180938774784468,0.238744688006273,0,5.24665505933731,0,0.854354403989263,0.206386867963223,0.185194527369712,0.753473828018764,0.410082683163076,0.686334519619568,0,0.139951452323658,0,0.954670618015114,0.474503990371703,0,0.216010681643603,0.209088296014469,0,0,0.247960367176008,0,0.129614973291793,0,0,0.149516546043979,0.165458490457098,0.194451188344048,0,0,0.117357238645754,0,0.419437377702843,0,0,0.632022241256357,0.405450430580328,0.102710957164827,0.129920822977795,0,0.39736270956253,0.240390899039938,0.147689527174577,0.201932899896295,0,0.201652370273681,0.194915761479505,0.0962118416403295,0.116876902181569,0,0,0.0897138566094757,0.167884616364078,0.19318959403219,0,0.36630324853453,0,0.501572104035363,0.564751842617067,0,0,0,0,0,0,0.45032120322422,0.453142408984205,0,0,0.399024873401031,0.170733605754134,0.243106717068294,0,0,0.222246727801615,0,0,0,0.25347929989024,0.188626341386076,0,0.128050304809739,0.114870937911227,0,0,0.192909220463705,0.412085900803307,0.147198920134397,0,0,0,0,0,0,0,0,0.135804113845862,0,0,0,0,0,0,0.749431733813838,0,0.859484216193193,0,0.661774257358546,0 | |||
|short_description=p@chr4:141264317..141264329,- | |||
}} |
Revision as of 04:20, 14 September 2013
Short description: | p@chr4:141264317..141264329, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr4:141264317..141264329, - |
Coexpression cluster: | MCL_coexpression_mm9:62 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
colon | 1.14e-15 | 2 |
large intestine | 1.14e-15 | 2 |
digestive tract diverticulum | 2.84e-11 | 23 |
sac | 2.84e-11 | 23 |
caecum | 1.05e-08 | 1 |
midgut | 1.05e-08 | 1 |
liver | 2.40e-08 | 22 |
epithelial sac | 2.40e-08 | 22 |
digestive gland | 2.40e-08 | 22 |
epithelium of foregut-midgut junction | 2.40e-08 | 22 |
anatomical boundary | 2.40e-08 | 22 |
hepatobiliary system | 2.40e-08 | 22 |
foregut-midgut junction | 2.40e-08 | 22 |
hepatic diverticulum | 2.40e-08 | 22 |
liver primordium | 2.40e-08 | 22 |
septum transversum | 2.40e-08 | 22 |
liver bud | 2.40e-08 | 22 |
exocrine gland | 2.44e-07 | 25 |
exocrine system | 2.44e-07 | 25 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.